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Towards an Artificial Intelligence Framework for Data-Driven Prediction of Coronavirus Clinical Severity

Jiang, Xiangao; Coffee, Megan; Bari, Anasse; Wang, Junzhang; Jiang, Xinyue; Huang, Jianping; Shi, Jichan; Dai, Jianyi; Cai, Jing; Zhang, Tianxiao; Wu, Zhengxing; He, Guiqing; Huang, Yitong
The virus SARS-CoV2, which causes coronavirus disease (COVID-19) has become a pandemic and has spread to every inhabited continent. Given the increasing caseload, there is an urgent need to augment clinical skills in order to identify from among the many mild cases the few that will progress to critical illness. We present a first step towards building an artificial intelligence (AI) framework, with predictive analytics (PA) capabilities applied to real patient data, to provide rapid clinical decision-making support. COVID-19 has presented a pressing need as a) clinicians are still developing clinical acumen to this novel disease and b) resource limitations in a surging pandemic require difficult resource allocation decisions. The objectives of this research are: (1) to algorithmically identify the combinations of clinical characteristics of COVID-19 that predict outcomes, and (2) to develop a tool with AI capabilities that will predict patients at risk for more severe illness on initial presentation. The predictive models learn from historical data to help predict who will develop acute respiratory distress syndrome (ARDS), a severe outcome in COVID-19. Our results, based on data from two hospitals in Wenzhou, Zhejiang, China, identified features on initial presentation with COVID-19 that were most predictive of later development of ARDS. A mildly elevated alanine aminotransferase (ALT) (a liver enzyme), the presence of myalgias (body aches), and an elevated hemoglobin (red blood cells), in this order, are the clinical features, on presentation, that are the most predictive. The predictive models that learned from historical data of patients from these two hospitals achieved 70% to 80% accuracy in predicting severe cases
ORIGINAL:0014774
ISSN: 1546-2218
CID: 4581862

Lessons Learned from Assessing Trustworthy AI in Practice

Vetter, Dennis; Amann, Julia; Bruneault, Frederick; Coffee, Megan; Dudder, Boris; Gallucci, Alessio; Gilbert, Thomas Krendl; Hagendorff, Thilo; van Halem, Irmhild; Hickman, Eleanore; Hildt, Elisabeth; Holm, Sune; Kararigas, Georgios; Kringen,Pedro; Madai, Vince l; Mathez, Emilie Wiinblad; Tithi, Jesmin Jahan; Westerlund, Magnus; Wurth, Renee; Zicari, Roberto V, Zicari
Building artificial intelligence (AI) systems that adhere to ethical standards is a complex problem. Even though a multitude of guidelines for the design and development of such trustworthy AI systems exist, these guidelines focus on high-level and abstract requirements for AI systems, and it is often very difficult to assess if a specific system fulfills these requirements. The Z-Inspection® process provides a holistic and dynamic framework to evaluate the trustworthiness of specific AI systems at different stages of the AI lifecycle, including intended use, design, and development. It focuses, in particular, on the discussion and identification of ethical issues and tensions through the analysis of socio-technical scenarios and a requirement-based framework for ethical and trustworthy AI. This article is a methodological reflection on the Z-Inspection® process. We illustrate how high-level guidelines for ethical and trustworthy AI can be applied in practice and provide insights for both AI researchers and AI practitioners. We share the lessons learned from conducting a series of independent assessments to evaluate the trustworthiness of real-world AI systems, as well as key recommendations and practical suggestions on how to ensure a rigorous trustworthiness assessment throughout the lifecycle of an AI system. The results presented in this article are based on our assessments of AI systems in the healthcare sector and environmental monitoring, where we used the framework for trustworthy AI proposed in the Ethics Guidelines for Trustworthy AI by the European Commission’s High-Level Expert Group on AI. However, the assessment process and the lessons learned can be adapted to other domains and include additional frameworks.
ORIGINAL:0017028
ISSN: 2731-4669
CID: 5568692

The impact of anthropogenic climate change on pediatric viral diseases

Chitre, Smit D; Crews, Cecilia M; Tessema, Mesfin Teklu; PlÄ—Å¡tytÄ—-BÅ«tienÄ—, IndrÄ—; Coffee, Megan; Richardson, Eugene T
The adverse effects of climate change on human health are unfolding in real time. Environmental fragmentation is amplifying spillover of viruses from wildlife to humans. Increasing temperatures are expanding mosquito and tick habitats, introducing vector-borne viruses into immunologically susceptible populations. More frequent flooding is spreading water-borne viral pathogens, while prolonged droughts reduce regional capacity to prevent and respond to disease outbreaks with adequate water, sanitation, and hygiene resources. Worsening air quality and altered transmission seasons due to an increasingly volatile climate may exacerbate the impacts of respiratory viruses. Furthermore, both extreme weather events and long-term climate variation are causing the destruction of health systems and large-scale migrations, reshaping health care delivery in the face of an evolving global burden of viral disease. Because of their immunological immaturity, differences in physiology (e.g., size), dependence on caregivers, and behavioral traits, children are particularly vulnerable to climate change. This investigation into the unique pediatric viral threats posed by an increasingly inhospitable world elucidates potential avenues of targeted programming and uncovers future research questions to effect equitable, actionable change. IMPACT: A review of the effects of climate change on viral threats to pediatric health, including zoonotic, vector-borne, water-borne, and respiratory viruses, as well as distal threats related to climate-induced migration and health systems. A unique focus on viruses offers a more in-depth look at the effect of climate change on vector competence, viral particle survival, co-morbidities, and host behavior. An examination of children as a particularly vulnerable population provokes programming tailored to their unique set of vulnerabilities and encourages reflection on equitable climate adaptation frameworks.
PMID: 38057578
ISSN: 1530-0447
CID: 5588762

Vitasd: Robust Vision Transformer Baselines for Autism Spectrum Disorder Facial Diagnosis

Chapter by: Cao, Xu; Ye, Wenqian; Sizikova, Elena; Bai, Xue; Coffee, Megan; Zeng, Hongwu; Cao, Jianguo
in: ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings by
[S.l.] : Institute of Electrical and Electronics Engineers Inc., 2023
pp. ?-?
ISBN: 9781728163277
CID: 5615182

Exploring Coronavirus Disease 2019 Vaccine Hesitancy on Twitter Using Sentiment Analysis and Natural Language Processing Algorithms

Bari, Anasse; Heymann, Matthias; Cohen, Ryan J; Zhao, Robin; Szabo, Levente; Apas Vasandani, Shailesh; Khubchandani, Aashish; DiLorenzo, Madeline; Coffee, Megan
BACKGROUND:Vaccination can help control the coronavirus disease 2019 (COVID-19) pandemic but is undermined by vaccine hesitancy. Social media disseminates information and misinformation regarding vaccination. Tracking and analyzing social media vaccine sentiment could better prepare health professionals for vaccination conversations and campaigns. METHODS:A real-time big data analytics framework was developed using natural language processing sentiment analysis, a form of artificial intelligence. The framework ingests, processes, and analyzes tweets for sentiment and content themes, such as natural health or personal freedom, in real time. A later dataset evaluated the relationship between Twitter sentiment scores and vaccination rates in the United States. RESULTS:The real-time analytics framework showed a widening gap in sentiment with more negative sentiment after vaccine rollout. After rollout, using a static dataset, an increase in positive sentiment was followed by an increase in vaccination. Lag cross-correlation analysis across US regions showed evidence that once all adults were eligible for vaccination, the sentiment score consistently correlated with vaccination rate with a lag of around 1 week. The Granger causality test further demonstrated that tweet sentiment scores may help predict vaccination rates. CONCLUSIONS:Social media has influenced the COVID-19 response through valuable information and misinformation and distrust. This tool was used to collect and analyze tweets at scale in real time to study sentiment and key terms of interest. Separate tweet analysis showed that vaccination rates tracked regionally with Twitter vaccine sentiment and might forecast changes in vaccine uptake and/or guide targeted social media and vaccination strategies. Further work is needed to analyze the interplay between specific populations, vaccine sentiment, and vaccination rates.
PMID: 35568473
ISSN: 1537-6591
CID: 5215212

To explain or not to explain? Artificial intelligence explainability in clinical decision support systems

Amann, Julia; Vetter, Dennis; Blomberg, Stig Nikolaj; Christensen, Helle Collatz; Coffee, Megan; Gerke, Sara; Gilbert, Thomas K; Hagendorff, Thilo; Holm, Sune; Livne, Michelle; Spezzatti, Andy; Strümke, Inga; Zicari, Roberto V; Madai, Vince Istavan
ORIGINAL:0015549
ISSN: 2767-3170
CID: 5202182

Assessing Trustworthy AI in times of COVID-19. Deep Learning for predicting a multi-regional score conveying the degree of lung compromise in COVID-19 patients

Allahabadi, Himanshi; Amann, Julia; Balot, Isabelle; Beretta, Andrea; Binkley, Charles; Bozenhard, Jonas; Bruneault, Frederick; Brusseau, James; Candemir, Sema; Alessandro, Luca; Fieux, Genevieve; Chakraborty, Subrata; Cherciu, Nicoleta; Cociancig, Christina; Coffee, Megan; Ek, Irene; Espinosa-Leal, Leonardo; Farina, Davide; Fieux-Castagnet, Genevieve; Frauenfelder, Thomas; Gallucci, Alessio; Giuliani, Guya; Golda, Adam; van Halem, Irmhild; Hildt, Elisabeth; Holm, Sune; Kararigas, Georgios; Krier, Sebastien A; Kuhne, Ulrich; Lizzi, Francesca; Madai, Vince I; Markus, Aniek F; Masis, Serg; Wiinblad, Emilie; Mureddu, Francesco; Neri, Emanuele; Osika, Walter; Ozols, Matiss; Panigutti, Cecilia; Parent, Brendan; Pratesi, Francesca; Moreno-Sanchez, Pedro A; Sartor, Giovanni; Savardi, Mattia; Signoroni, Alberto; Sormunen, Hanna; Spezzatti, Andy; Srivastava, Adarsh; Stephansen, Annette F; Bee, Lau; Jahan, Jesmin; Tuominen, Jarno; Umbrello, Steven; Vaccher, Filippo; Vetter,, Dennis; Westerlund, Magnus; Wurth, Renee; Zicari, Roberto V;
ORIGINAL:0015725
ISSN: 2637-6415
CID: 5286152

On Assessing Trustworthy AI in Healthcare. Machine Learning as a Supportive Tool to Recognize Cardiac Arrest in Emergency Calls

Zicari, Roberto V; Brusseau, James; Blomberg, Stig Nikolaj; Christensen, Helle Collatz; Coffee, Megan; Ganapini, Marianna B; Gerke, Sara; Gilbert, Thomas Krendl; Hickman, Eleanore; Hildt, Elisabeth; Holm, Sune; Kuhne, Ulrich; Madai, Vince I; Osika, Walter; Spezzatti, Andy; Schnebel, Eberhard; Tithi, Jesmin Jahan; Vetter, Dennis; Westerlund, Magnus; Wurth, Renee; Amann, Julia; Antun, Vegard; Beretta, Valentina; Bruneault, Frederick; Campano, Erik; Dudder, Boris; Gallucci, Alessio; Goffi, Emmanuel; Haase, Christoffer Bjerre; Hagendoff, Thilo; Kringen, Pedro; Moslein, Florian; Ottenheimer, Davi; Ozols, Matiss; Palazzani, Laura; Petrin, Martin; Tafur, Karin; Torresen, Jim; Volland, Holger; Karaigas, Georgios
ORIGINAL:0015197
ISSN: 2673-2726
CID: 4935932

Co-Design of a Trustworthy AI System in Healthcare: Deep Learning Based Skin Lesion Classifier

Zicari, Roberto V; Ahmed, Sheraz; Amann, Julia; Braun, Stephan Alexander; Brodersen, John; Brusseau, James; Campano, Erik; Coffee, Megan; Dengel, Andreas; Dudder, Boris; Gallucci, Alessio; Gilbert, Thomas Krendl; Gottfrois, Philippe; Goffi, Emmanuel; Haase, Christoffer Bjerre; Hagendoff, Thilo; Hickman, Eleanore; Hildt, Elisabeth; Holm, Sune; Kringen, Pedro; Kuhne, Ulrich; Lucieri, Adriano; Madai, Vince I; Moreno-Sanchez, Pedro A; Medlicott, Oriana; Ozols, Matiss; Schnebel, Eberhard; Spezzatti, Andy; Tithi, Jesmin Jahan; Umbrelo, Steven; Vetter, Dennis; Volland, Holger; Westerlund, Magnus; Wurth, Renee
ORIGINAL:0015201
ISSN: 2673-2726
CID: 4937122

COVID-19 early-alert signals using human behavior alternative data

Bari, Anasse; Khubchandani, Aashish; Wang, Junzhang; Heymann, Matthias; Coffee, Megan
Google searches create a window into population-wide thoughts and plans not just of individuals, but populations at large. Since the outbreak of COVID-19 and the non-pharmaceutical interventions introduced to contain it, searches for socially distanced activities have trended. We hypothesize that trends in the volume of search queries related to activities associated with COVID-19 transmission correlate with subsequent COVID-19 caseloads. We present a preliminary analytics framework that examines the relationship between Google search queries and the number of newly confirmed COVID-19 cases in the United States. We designed an experimental tool with search volume indices to track interest in queries related to two themes: isolation and mobility. Our goal was to capture the underlying social dynamics of an unprecedented pandemic using alternative data sources that are new to epidemiology. Our results indicate that the net movement index we defined correlates with COVID-19 weekly new case growth rate with a lag of between 10 and 14 days for the United States at-large, as well as at the state level for 42 out of 50 states with the exception of 8 states (DE, IA, KS, NE, ND, SD, WV, WY) from March to June 2020. In addition, an increasing caseload was seen over the summer in some southern US states. A sharp rise in mobility indices was followed by a sharp increase, respectively, in the case growth data, as seen in our case study of Arizona, California, Florida, and Texas. A sharp decline in mobility indices is often followed by a sharp decline, respectively, in the case growth data, as seen in our case study of Arizona, California, Florida, Texas, and New York. The digital epidemiology framework presented here aims to discover predictors of the pandemic's curve, which could supplement traditional predictive models and inform early warning systems and public health policies.
PMCID:7859099
PMID: 33558823
ISSN: 1869-5450
CID: 4779492