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Genomic Classification of HER2-Positive Patients With 80-Gene and 70-Gene Signatures Identifies Diversity in Clinical Outcomes With HER2-Targeted Neoadjuvant Therapy

Whitworth, Pat W; Beitsch, Peter D; Murray, Mary K; Richards, Paul D; Mislowsky, Angela; Dul, Carrie L; Pellicane, James V; Baron, Paul L; Rahman, Rakhshanda Layeequr; Lee, Laura A; Dupree, Beth B; Kelemen, Pond R; Ashikari, Andrew Y; Budway, Raye J; Lopez-Penalver, Cristina; Dooley, William; Wang, Shiyu; Dauer, Patricia; Menicucci, Andrea R; Yoder, Erin B; Finn, Christine; Blumencranz, Lisa E; Audeh, William
PURPOSE/OBJECTIVE:The prospective Neoadjuvant Breast Registry Symphony Trial compared the 80-gene molecular subtyping signature with clinical assessment by immunohistochemistry and/or fluorescence in situ hybridization in predicting pathologic complete response (pCR) and 5-year outcomes in patients with early-stage breast cancer. METHODS:Standard-of-care neoadjuvant chemotherapy combined with trastuzumab or trastuzumab plus pertuzumab was given to patients with human epidermal growth factor receptor 2 (HER2)-positive tumors (n = 295). pCR was the primary end point, with secondary end points of distant metastasis-free survival and overall survival at 5 years. RESULTS:= .010), with similar corresponding overall survival differences. CONCLUSION/CONCLUSIONS:The 80-gene assay identified meaningful genomic diversity in patients with cHER2 disease. Patients with cHER2/gHER2 tumors, who benefitted most from dual HER2-targeted therapy, accounted for approximately half of the cHER2 cohort. Genomically Luminal tumors had low pCR rates but good 5-year outcomes. cHER2/gBasal tumors derived no benefit from dual therapy and had significantly worse 5-year prognosis; these patients merit special consideration in future trials.
PMCID:9489196
PMID: 36108259
ISSN: 2473-4284
CID: 5342002

Distinct Neoadjuvant Chemotherapy Response and 5-Year Outcome in Patients With Estrogen Receptor-Positive, Human Epidermal Growth Factor Receptor 2-Negative Breast Tumors That Reclassify as Basal-Type by the 80-Gene Signature

Whitworth, Pat W; Beitsch, Peter D; Pellicane, James V; Baron, Paul L; Lee, Laura A; Dul, Carrie L; Murray, Mary K; Gittleman, Mark A; Budway, Raye J; Rahman, Rakhshanda Layeequr; Kelemen, Pond R; Dooley, William C; Rock, David T; Cowan, Kenneth H; Lesnikoski, Beth-Ann; Barone, Julie L; Ashikari, Andrew Y; Dupree, Beth B; Wang, Shiyu; Menicucci, Andrea R; Yoder, Erin B; Finn, Christine; Corcoran, Kate; Blumencranz, Lisa E; Audeh, William
PURPOSE/OBJECTIVE:The 80-gene molecular subtyping signature (80-GS) reclassifies a proportion of immunohistochemistry (IHC)-defined luminal breast cancers (estrogen receptor-positive [ER+], human epidermal growth factor receptor 2-negative [HER2-]) as Basal-Type. We report the association of 80-GS reclassification with neoadjuvant treatment response and 5-year outcome in patients with breast cancer. METHODS:Neoadjuvant Breast Registry Symphony Trial (NBRST; NCT01479101) is an observational, prospective study that included 1,069 patients with early-stage breast cancer age 18-90 years who received neoadjuvant therapy. Pathologic complete response (pCR) and 5-year distant metastasis-free survival (DMFS) and overall survival (OS) were assessed in 477 patients with IHC-defined ER+, HER2- tumors and in a reference group of 229 patients with IHC-defined triple-negative breast cancer (TNBC). RESULTS:< .001) tumors. The 5-year DMFS (%, [95% CI]) was significantly lower for patients with ER+/Basal tumors (66% [52.6 to 77.3]), compared with those with ER+/Luminal A tumors (92.3% [85.2 to 96.1]) and ER+/Luminal B tumors (73.5% [44.5 to 79.3]). Importantly, patients with ER+/Basal or TNBC/Basal tumors that had a pCR exhibited significantly improved DMFS and OS compared with those with residual disease. By contrast, patients with ER+/Luminal B tumors had comparable 5-year DMFS and OS whether or not they achieved pCR. CONCLUSION/CONCLUSIONS:Significant differences in chemosensitivity and 5-year outcome suggest patients with ER+/Basal molecular subtype may benefit from neoadjuvant regimens optimized for patients with TNBC/Basal tumors compared with patients with ER+/Luminal subtype. These data highlight the importance of identifying this subset of patients to improve treatment planning and long-term survival.
PMID: 35476550
ISSN: 2473-4284
CID: 5210342

Molecular profiles and clinical-pathological features of Asian early-stage breast cancer patients [Meeting Abstract]

Chen, Margaret; Kwong, Ava; Hendricks, Carolyn; D\Abreo, Nina; Lee, Laura; Soliman, Hatem H.; Cox, Charles; Kling, Heather M.; Bhaskaran, Rajith; Wang, Shiyu; Menicucci, Andrea; Untch, Sarah; Audeh, William
ISI:000618737701161
ISSN: 0008-5472
CID: 4821122

The FLEX real-world data platform explores new gene expression profiles and investigator-initiated protocols in early stage breast cancer. [Meeting Abstract]

D\Abreo, Nina; Crozier, Jennifer A.; Brufsky, Adam; Grady, Ian; Diab, Sami; Mavromatis, Blanche H.; Dul, Carrie L.; Rahman, Rakhshanda Layeequr; Lee, Laura A.; Gadi, Vijayakrishna K.; Untch, Sarah; Yoder, Erin; Kling, Heather M.; Truitt, Amy; Audeh, William
ISI:000560368309213
ISSN: 0732-183x
CID: 4821052

MammaPrint and BluePrint Molecular Profiles and Clinical-Pathological Features of Asian Early-stage Breast Cancer Patients: A Meta-analysis of Six Prospective Clinical Trials [Meeting Abstract]

Chen, Margaret; Whitworth, Pat; D\Abreo, Nina; Lomis, Thomas; Lee, Laura; Tsai, Michaela; Soliman, Hatem; Cox, Charles; Untch, Sarah; Kling, Heather; Audeh, William; Kwong, Ava
ISI:000538247800067
ISSN: 1068-9265
CID: 4821022

A biochemical screen for identification of small-molecule regulators of the Wnt pathway using Xenopus egg extracts

Thorne, Curtis A; Lafleur, Bonnie; Lewis, Michelle; Hanson, Alison J; Jernigan, Kristin K; Weaver, David C; Huppert, Kari A; Chen, Tony W; Wichaidit, Chonlarat; Cselenyi, Christopher S; Tahinci, Emilios; Meyers, Kelly C; Waskow, Emily; Orton, Darren; Salic, Adrian; Lee, Laura A; Robbins, David J; Huppert, Stacey S; Lee, Ethan
Misregulation of the Wnt pathway has been shown to be responsible for a variety of human diseases, most notably cancers. Screens for inhibitors of this pathway have been performed almost exclusively using cultured mammalian cells or with purified proteins. We have previously developed a biochemical assay using Xenopus egg extracts to recapitulate key cytoplasmic events in the Wnt pathway. Using this biochemical system, we show that a recombinant form of the Wnt coreceptor, LRP6, regulates the stability of two key components of the Wnt pathway (β-catenin and Axin) in opposing fashion. We have now fused β-catenin and Axin to firefly and Renilla luciferase, respectively, and demonstrate that the fusion proteins behave similarly as their wild-type counterparts. Using this dual luciferase readout, we adapted the Xenopus extracts system for high-throughput screening. Results from these screens demonstrate signal distribution curves that reflect the complexity of the library screened. Of several compounds identified as cytoplasmic modulators of the Wnt pathway, one was further validated as a bona fide inhibitor of the Wnt pathway in cultured mammalian cells and Xenopus embryos. We show that other embryonic pathways may be amendable to screening for inhibitors/modulators in Xenopus egg extracts.
PMCID:3694444
PMID: 21859680
ISSN: 1552-454x
CID: 2905182

Small-molecule inhibition of Wnt signaling through activation of casein kinase 1α

Thorne, Curtis A; Hanson, Alison J; Schneider, Judsen; Tahinci, Emilios; Orton, Darren; Cselenyi, Christopher S; Jernigan, Kristin K; Meyers, Kelly C; Hang, Brian I; Waterson, Alex G; Kim, Kwangho; Melancon, Bruce; Ghidu, Victor P; Sulikowski, Gary A; LaFleur, Bonnie; Salic, Adrian; Lee, Laura A; Miller, David M; Lee, Ethan
Wnt/β-catenin signaling is critically involved in metazoan development, stem cell maintenance and human disease. Using Xenopus laevis egg extract to screen for compounds that both stabilize Axin and promote β-catenin turnover, we identified an FDA-approved drug, pyrvinium, as a potent inhibitor of Wnt signaling (EC(50) of ∼10 nM). We show pyrvinium binds all casein kinase 1 (CK1) family members in vitro at low nanomolar concentrations and pyrvinium selectively potentiates casein kinase 1α (CK1α) kinase activity. CK1α knockdown abrogates the effects of pyrvinium on the Wnt pathway. In addition to its effects on Axin and β-catenin levels, pyrvinium promotes degradation of Pygopus, a Wnt transcriptional component. Pyrvinium treatment of colon cancer cells with mutation of the gene for adenomatous polyposis coli (APC) or β-catenin inhibits both Wnt signaling and proliferation. Our findings reveal allosteric activation of CK1α as an effective mechanism to inhibit Wnt signaling and highlight a new strategy for targeted therapeutics directed against the Wnt pathway.
PMCID:3681608
PMID: 20890287
ISSN: 1552-4469
CID: 2905192

Gbetagamma activates GSK3 to promote LRP6-mediated beta-catenin transcriptional activity

Jernigan, Kristin K; Cselenyi, Christopher S; Thorne, Curtis A; Hanson, Alison J; Tahinci, Emilios; Hajicek, Nicole; Oldham, William M; Lee, Laura A; Hamm, Heidi E; Hepler, John R; Kozasa, Tohru; Linder, Maurine E; Lee, Ethan
Evidence from Drosophila and cultured cell studies supports a role for heterotrimeric guanosine triphosphate-binding proteins (G proteins) in Wnt signaling. Wnt inhibits the degradation of the transcriptional regulator beta-catenin. We screened the alpha and betagamma subunits of major families of G proteins in a Xenopus egg extract system that reconstitutes beta-catenin degradation. We found that Galpha(o), Galpha(q), Galpha(i2), and Gbetagamma inhibited beta-catenin degradation. Gbeta(1)gamma(2) promoted the phosphorylation and activation of the Wnt co-receptor low-density lipoprotein receptor-related protein 6 (LRP6) by recruiting glycogen synthase kinase 3 (GSK3) to the membrane and enhancing its kinase activity. In both a reporter gene assay and an in vivo assay, c-betaARK (C-terminal domain of beta-adrenergic receptor kinase), an inhibitor of Gbetagamma, blocked LRP6 activity. Several components of the Wnt-beta-catenin pathway formed a complex: Gbeta(1)gamma(2), LRP6, GSK3, axin, and dishevelled. We propose that free Gbetagamma and Galpha subunits, released from activated G proteins, act cooperatively to inhibit beta-catenin degradation and activate beta-catenin-mediated transcription.
PMCID:3088111
PMID: 20460648
ISSN: 1937-9145
CID: 2905202

alpha-Endosulfine is a conserved protein required for oocyte meiotic maturation in Drosophila

Von Stetina, Jessica R; Tranguch, Susanne; Dey, Sudhansu K; Lee, Laura A; Cha, Byeong; Drummond-Barbosa, Daniela
Meiosis is coupled to gamete development and must be well regulated to prevent aneuploidy. During meiotic maturation, Drosophila oocytes progress from prophase I to metaphase I. The molecular factors controlling meiotic maturation timing, however, are poorly understood. We show that Drosophila alpha-endosulfine (endos) plays a key role in this process. endos mutant oocytes have a prolonged prophase I and fail to progress to metaphase I. This phenotype is similar to that of mutants of cdc2 (synonymous with cdk1) and of twine, the meiotic homolog of cdc25, which is required for Cdk1 activation. We found that Twine and Polo kinase levels are reduced in endos mutants, and identified Early girl (Elgi), a predicted E3 ubiquitin ligase, as a strong Endos-binding protein. In elgi mutant oocytes, the transition into metaphase I occurs prematurely, but Polo and Twine levels are unaffected. These results suggest that Endos controls meiotic maturation by regulating Twine and Polo levels, and, independently, by antagonizing Elgi. Finally, germline-specific expression of the human alpha-endosulfine ENSA rescues the endos mutant meiotic defects and infertility, and alpha-endosulfine is expressed in mouse oocytes, suggesting potential conservation of its meiotic function.
PMCID:2654389
PMID: 18927152
ISSN: 0950-1991
CID: 2157222

LRP6 transduces a canonical Wnt signal independently of Axin degradation by inhibiting GSK3's phosphorylation of beta-catenin

Cselenyi, Christopher S; Jernigan, Kristin K; Tahinci, Emilios; Thorne, Curtis A; Lee, Laura A; Lee, Ethan
Wnt/beta-catenin signaling controls various cell fates in metazoan development and is misregulated in several cancers and developmental disorders. Binding of a Wnt ligand to its transmembrane coreceptors inhibits phosphorylation and degradation of the transcriptional coactivator beta-catenin, which then translocates to the nucleus to regulate target gene expression. To understand how Wnt signaling prevents beta-catenin degradation, we focused on the Wnt coreceptor low-density lipoprotein receptor-related protein 6 (LRP6), which is required for signal transduction and is sufficient to activate Wnt signaling when overexpressed. LRP6 has been proposed to stabilize beta-catenin by stimulating degradation of Axin, a scaffold protein required for beta-catenin degradation. In certain systems, however, Wnt-mediated Axin turnover is not detected until after beta-catenin has been stabilized. Thus, LRP6 may also signal through a mechanism distinct from Axin degradation. To establish a biochemically tractable system to test this hypothesis, we expressed and purified the LRP6 intracellular domain from bacteria and show that it promotes beta-catenin stabilization and Axin degradation in Xenopus egg extract. Using an Axin mutant that does not degrade in response to LRP6, we demonstrate that LRP6 can stabilize beta-catenin in the absence of Axin turnover. Through experiments in egg extract and reconstitution with purified proteins, we identify a mechanism whereby LRP6 stabilizes beta-catenin independently of Axin degradation by directly inhibiting GSK3's phosphorylation of beta-catenin.
PMCID:2430354
PMID: 18509060
ISSN: 1091-6490
CID: 2905212