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Deep Learning-based Fibrosis Extent on Computed Tomography Predicts Outcome of Fibrosing Interstitial Lung Disease Independent of Visually Assessed Computed Tomography Pattern

Oh, Andrea S; Lynch, David A; Swigris, Jeffrey J; Baraghoshi, David; Dyer, Debra S; Hale, Valerie A; Koelsch, Tilman L; Marrocchio, Cristina; Parker, Katherine N; Teague, Shawn D; Flaherty, Kevin R; Humphries, Stephen M
PMID: 37696027
ISSN: 2325-6621
CID: 5814032

Pirfenidone in fibrotic hypersensitivity pneumonitis: a double-blind, randomised clinical trial of efficacy and safety

Fernández Pérez, Evans R; Crooks, James L; Lynch, David A; Humphries, Stephen M; Koelsch, Tilman L; Swigris, Jeffrey J; Solomon, Joshua J; Mohning, Michael P; Groshong, Steve D; Fier, Kaitlin
BACKGROUND:Fibrotic hypersensitivity pneumonitis (FHP) is an irreversible lung disease with high morbidity and mortality. We sought to evaluate the safety and effect of pirfenidone on disease progression in such patients. METHODS:We conducted a single-centre, randomised, double-blinded, placebo-controlled trial in adults with FHP and disease progression. Patients were assigned in a 2:1 ratio to receive either oral pirfenidone (2403 mg/day) or placebo for 52 weeks. The primary end point was the mean absolute change in the per cent predicted forced vital capacity (FVC%). Secondary end points included progression-free survival (PFS, time to a relative decline ≥10% in FVC and/or diffusing capacity of the lung for carbon monoxide (DLCO), acute respiratory exacerbation, a decrease of ≥50 m in the 6 min walk distance, increase or introduction of immunosuppressive drugs or death), change in FVC slope and mean DLCO%, hospitalisations, radiological progression of lung fibrosis and safety. RESULTS:After randomising 40 patients, enrolment was interrupted by the COVID-19 pandemic. There was no significant between-group difference in FVC% at week 52 (mean difference -0.76%, 95% CI -6.34 to 4.82). Pirfenidone resulted in a lower rate of decline in the adjusted FVC% at week 26 and improved PFS (HR 0.26, 95% CI 0.12 to 0.60). Results for other secondary end points showed no significant difference between groups. No deaths occurred in the pirfenidone group and one death (respiratory) occurred in the placebo group. There were no treatment-emergent serious adverse events. CONCLUSIONS:The trial was underpowered to detect a difference in the primary end point. Pirfenidone was found to be safe and improved PFS in patients with FHP. TRIAL REGISTRATION MUMBER:NCT02958917.
PMID: 37028940
ISSN: 1468-3296
CID: 5814022

Findings on High Resolution Computed Tomography in Symptomatic Veterans with Deployment-Related Lung Disease

Rose, Cecile S; Zell-Baran, Lauren M; Cool, Carlyne; Moore, Camille M; Wolff, Jenna; Oh, Andrea S; Koelsch, Tilman; Richards, John C; Krefft, Silpa D; Wilson, Carla G; Lynch, David A
PURPOSE/OBJECTIVE:Military deployment to dusty, austere environments in Southwest Asia and Afghanistan is associated with symptomatic airways diseases including asthma and bronchiolitis. The utility of chest high-resolution computed tomographic (HRCT) imaging in lung disease diagnosis in this population is poorly understood. We investigated visual assessment of HRCT for identifying deployment-related lung disease compared with healthy controls. MATERIALS AND METHODS/METHODS:Chest HRCT images from 46 healthy controls and 45 symptomatic deployed military personnel with clinically confirmed asthma and/or biopsy-confirmed distal lung disease were scored by 3 independent thoracic radiologists. We compared demographic and clinical characteristics and frequency of imaging findings between deployers and controls, and between deployers with asthma and those with biopsy-confirmed distal lung disease, using χ2, Fisher exact or t tests, and logistic regression where appropriate. We also analyzed inter-rater agreement for imaging findings. RESULTS:Expiratory air trapping was the only chest CT imaging finding that was significantly more frequent in deployers compared with controls. None of the 24 deployers with biopsy-confirmed bronchiolitis and/or granulomatous pneumonitis had HRCT findings of inspiratory mosaic attenuation or centrilobular nodularity. Only 2 of 21 with biopsy-proven emphysema had emphysema on HRCT. CONCLUSIONS:Compared with surgical lung biopsy, visual assessment of HRCT showed few abnormalities in this small cohort of previously deployed symptomatic veterans with normal or near-normal spirometry.
PMCID:10940183
PMID: 37732711
ISSN: 1536-0237
CID: 5814012

Characterization of Immune Cells From the Lungs of Patients With Chronic Non-Tuberculous Mycobacteria or Pseudomonas aeruginosa Infection

Schenkel, Alan R; Mitchell, John D; Cool, Carlyne D; Bai, Xiyuan; Groshong, Steve; Koelsch, Tilman; Verma, Deepshikha; Ordway, Diane; Chan, Edward D
Little is known of the lung cellular immunophenotypes in patients with non-tuberculous mycobacterial lung disease (NTM-LD). Flow-cytometric analyses for the major myeloid and lymphoid cell subsets were performed in less- and more-diseased areas of surgically resected lungs from six patients with NTM-LD and two with Pseudomonas aeruginosa lung disease (PsA-LD). Lymphocytes, comprised mainly of NK cells, CD4+ and CD8+ T cells, and B cells, accounted for ~60% of all leukocytes, with greater prevalence of T and B cells in more-diseased areas. In contrast, fewer neutrophils were found with decreased number in more-diseased areas. Compared to NTM-LD, lung tissues from patients with PsA-LD demonstrated relatively lower numbers of T and B lymphocytes but similar numbers of NK cells. While this study demonstrated a large influx of lymphocytes into the lungs of patients with chronic NTM-LD, further analyses of their phenotypes are necessary to determine the significance of these findings.
PMCID:9250871
PMID: 35799709
ISSN: 1598-2629
CID: 5814002

Prognostic accuracy of a peripheral blood transcriptome signature in chronic hypersensitivity pneumonitis

Fernández Pérez, Evans R; Harmacek, Laura D; O'Connor, Brian P; Danhorn, Thomas; Vestal, Brian; Maier, Lisa A; Koelsch, Tilman L; Leach, Sonia M
The prognostic value of peripheral blood mononuclear cell (PBMC) expression profiles, when used in patients with chronic hypersensitivity pneumonitis (CHP), as an adjunct to traditional clinical assessment is unknown. RNA-seq analysis on PBMC from 37 patients with CHP at initial presentation determined that (1) 74 differentially expressed transcripts at a 10% false discovery rate distinguished those with (n=10) and without (n=27) disease progression, defined as absolute FVC and/or diffusing capacity of the lungs for carbon monoxide (DLCO) decline of ≥10% and increased fibrosis on chest CT images within 24 months, and (2) classification models based on gene expression and clinical factors strongly outperform models based solely on clinical factors (baseline FVC%, DLCO% and chest CT fibrosis).
PMCID:9246298
PMID: 34183448
ISSN: 1468-3296
CID: 5813992

Analysis of Non-TB Mycobacterial Lung Disease in Patients With Primary Sjögren's Syndrome at a Referral Center [Letter]

Weingart, Melanie F; Li, Qing; Choi, Sangbong; Maleki-Fischbach, Mehrnaz; Kwon, Yong Soo; Koelsch, Tilman; Dow, Coad Thomas; Truong, Tho Q; Chan, Edward D
PMID: 33440182
ISSN: 1931-3543
CID: 5813982

Clinical Decision-Making in Hypersensitivity Pneumonitis: Diagnosis and Management

Fernández Pérez, Evans R; Koelsch, Tilman L; Leone, Paolo M; Groshong, Steve D; Lynch, David A; Brown, Kevin K
This review provides an updated approach to the diagnosis and management of hypersensitivity pneumonitis (HP). The importance of using a multidisciplinary discussion to increase diagnostic and treatment confidence is emphasized. The role of Bayesian reasoning is highlighted throughout, underscoring the importance of hypothesis generation (differential diagnosis) and diagnostic test interpretation based on the probability of HP. Probability estimates of diagnostic certainty (i.e., a confident versus a working diagnosis) and treatment thresholds are carefully examined.Therapeutically, beyond antigen avoidance and newly available antifibrotic therapy for patients with a progressive fibrosing phenotype; the role, timing, and expected response to anti-inflammatory therapy in individual patients are unanswered questions. Since the evidence and validation of testing generally performed during the diagnostic work-up and longitudinal monitoring of HP is feeble at best, the viewpoints discussed are not intended to resolve current controversies but rather to provide a conceptual framework for evaluating discordant information when evaluating and caring for patients with HP.
PMID: 32279292
ISSN: 1098-9048
CID: 5813972

Similar characteristics of nontuberculous mycobacterial pulmonary disease in men and women [Letter]

Holt, Michael R; Kasperbauer, Shannon H; Koelsch, Tilman L; Daley, Charles L
PMID: 30956208
ISSN: 1399-3003
CID: 5813962

Isolated Cystic Lung Disease: An Algorithmic Approach to Distinguishing Birt-Hogg-Dubé Syndrome, Lymphangioleiomyomatosis, and Lymphocytic Interstitial Pneumonia

Escalon, Joanna G; Richards, John C; Koelsch, Tilman; Downey, Gregory P; Lynch, David A
PMID: 30888864
ISSN: 1546-3141
CID: 5813952

Differentiating Usual Interstitial Pneumonia From Nonspecific Interstitial Pneumonia Using High-resolution Computed Tomography: The "Straight-edge Sign"

Zhan, Xi; Koelsch, Tilman; Montner, Steven M; Zhu, Allen; Vij, Rekha; Swigris, Jeffery J; Chung, Jonathan H
PURPOSE/OBJECTIVE:The purpose of this article was to determine whether a novel finding on coronal computed tomography (CT) can help differentiate usual interstitial pneumonia (UIP) from nonspecific interstitial pneumonia (NSIP) in order to obviate lung biopsy. MATERIALS AND METHODS/METHODS:Two chest radiologists, blinded to clinical data, reviewed 3 preselected coronal images from CT scans, performed within 1 year of surgical lung biopsy (SLB), from 51 patients with biopsy-proven UIP and 15 with biopsy-proven NSIP. The 198 (66×3) images were anonymized and randomized. The radiologists assessed each coronal image for the presence or absence of the straight-edge sign (SES) on both the right and left sides, anecdotally thought to be more common in NSIP than in UIP. The SES was defined as reticulation isolated to the lung bases with sharp demarcation in the craniocaudal plane and without substantial extension along the lateral margins of the lungs. A validation cohort from a second medical center was also evaluated to reassess our findings. RESULTS:The absence of a bilateral SES yielded a sensitivity, specificity, positive predictive value (PPV), and negative predictive value of 56.9%, 93.3%, 96.7%, and 38.9%, respectively, for UIP on SLB. The unilateral or bilateral absence of the SES yielded a sensitivity, specificity, PPV, and negative predictive value of 76.5%, 66.7%, 88.6%, and 45.5%, respectively, for UIP on SLB. For the 11 subjects with an overall CT pattern consistent with NSIP but a pathologic diagnosis of UIP, the SES was absent in 6 (54.5%) subjects. In the validation cohort, the SES was much more common in NSIP than in UIP (46.6% compared with 3.3%, respectively; P<0.001). CONCLUSION/CONCLUSIONS:The absence of the SES has a high PPV for biopsy-proven UIP. Bilateral absence of the SES has high specificity (93.3%) for biopsy-proven UIP. The SES may be useful for differentiating UIP from NSIP.
PMID: 29683868
ISSN: 1536-0237
CID: 5813932