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Evaluating Hospital Course Summarization by an Electronic Health Record-Based Large Language Model

Small, William R; Austrian, Jonathan; O'Donnell, Luke; Burk-Rafel, Jesse; Hochman, Katherine A; Goodman, Adam; Zaretsky, Jonah; Martin, Jacob; Johnson, Stephen; Major, Vincent J; Jones, Simon; Henke, Christian; Verplanke, Benjamin; Osso, Jwan; Larson, Ian; Saxena, Archana; Mednick, Aron; Simonis, Choumika; Han, Joseph; Kesari, Ravi; Wu, Xinyuan; Heery, Lauren; Desel, Tenzin; Baskharoun, Samuel; Figman, Noah; Farooq, Umar; Shah, Kunal; Jahan, Nusrat; Kim, Jeong Min; Testa, Paul; Feldman, Jonah
IMPORTANCE/UNASSIGNED:Hospital course (HC) summarization represents an increasingly onerous discharge summary component for physicians. Literature supports large language models (LLMs) for HC summarization, but whether physicians can effectively partner with electronic health record-embedded LLMs to draft HCs is unknown. OBJECTIVES/UNASSIGNED:To compare the editing effort required by time-constrained resident physicians to improve LLM- vs physician-generated HCs toward a novel 4Cs (complete, concise, cohesive, and confabulation-free) HC. DESIGN, SETTING, AND PARTICIPANTS/UNASSIGNED:Quality improvement study using a convenience sample of 10 internal medicine resident editors, 8 hospitalist evaluators, and randomly selected general medicine admissions in December 2023 lasting 4 to 8 days at New York University Langone Health. EXPOSURES/UNASSIGNED:Residents and hospitalists reviewed randomly assigned patient medical records for 10 minutes. Residents blinded to author type who edited each HC pair (physician and LLM) for quality in 3 minutes, followed by comparative ratings by attending hospitalists. MAIN OUTCOMES AND MEASURES/UNASSIGNED:Editing effort was quantified by analyzing the edits that occurred on the HC pairs after controlling for length (percentage edited) and the degree to which the original HCs' meaning was altered (semantic change). Hospitalists compared edited HC pairs with A/B testing on the 4Cs (5-point Likert scales converted to 10-point bidirectional scales). RESULTS/UNASSIGNED:Among 100 admissions, compared with physician HCs, residents edited a smaller percentage of LLM HCs (LLM mean [SD], 31.5% [16.6%] vs physicians, 44.8% [20.0%]; P < .001). Additionally, LLM HCs required less semantic change (LLM mean [SD], 2.4% [1.6%] vs physicians, 4.9% [3.5%]; P < .001). Attending physicians deemed LLM HCs to be more complete (mean [SD] difference LLM vs physicians on 10-point bidirectional scale, 3.00 [5.28]; P < .001), similarly concise (mean [SD], -1.02 [6.08]; P = .20), and cohesive (mean [SD], 0.70 [6.14]; P = .60), but with more confabulations (mean [SD], -0.98 [3.53]; P = .002). The composite scores were similar (mean [SD] difference LLM vs physician on 40-point bidirectional scale, 1.70 [14.24]; P = .46). CONCLUSIONS AND RELEVANCE/UNASSIGNED:Electronic health record-embedded LLM HCs required less editing than physician-generated HCs to approach a quality standard, resulting in HCs that were comparably or more complete, concise, and cohesive, but contained more confabulations. Despite the potential influence of artificial time constraints, this study supports the feasibility of a physician-LLM partnership for writing HCs and provides a basis for monitoring LLM HCs in clinical practice.
PMID: 40802185
ISSN: 2574-3805
CID: 5906762

Disappearing Text as a Clinical Decision Support Layer: A Case Series

Silberlust, Jared; Small, William; Shah, Darshi; Chakravartty, Eesha; Moawad, Katherine; Moawad, Andrew; Testa, Paul; Feldman, Jonah
OBJECTIVES/OBJECTIVE:This case series aims to evaluate several applications of inline disappearing text (DT) clinical decision support (CDS) tools within clinician documentation. METHODS:DT blocks were created to prompt documentation for perioperative anticoagulation planning (Scenario 1), pre-discharge intravenous antibiotic planning (Scenario 2), and advanced care planning (Scenario 3). In Scenario 1, DT was the only intervention. In Scenario 2, DT was paired with a documentation SmartList. In Scenario 3, DT was paired with a documentation SmartList and an OurPractice Advisory. The number of documented perioperative anticoagulation plans, pre-discharge intravenous antibiotic plans, and Advanced Care Planning notes were measured pre- and post-intervention and compared using Chi-square analyses. RESULTS:In Scenario 1, there was no statistically significant change in the percentage of perioperative anticoagulation plans documented at 0-24 and 24-48 hours before surgery. In Scenario 2, documentation of antibiotic contingency planning in patients expected to be discharged within 24 hours increased from 60% (54 of 90 notes) to 93% (1,850 of 1,994 notes) X2 (1, N=2,084) = 113.1, p < 0.001. In Scenario 3, ACP note documentation by discharge in patients with a positive mandatory surprise question increased from 43% (821 of 1,909 encounters) to 52% (975 of 1,874 encounters) X2 (1, N=3,783) = 30.5, p < 0.001. CONCLUSIONS:Utilizing DT in conjunction with other forms of CDS was associated with an improvement of documentation quality in pre-discharge IV antibiotics and advanced care planning. A sociotechnical analysis explores how interactions between technology, people, workflow, and culture could contextualize how utilizing DT with other forms of CDS was more effective than DT alone.
PMID: 40763805
ISSN: 1869-0327
CID: 5905032

ACR Appropriateness Criteria® Supplemental Breast Cancer Screening Based on Breast Density: 2024 Update

,; Paulis, Lisa V; Lewin, Alana A; Weinstein, Susan P; Baron, Paul; Dayaratna, Sandra; Dodelzon, Katerina; Dogan, Basak E; Gulati, Abhishek; Kantor, Olga; Kasales, Claudia; Kunjummen, Jean M; Kuzmiak, Cherie M; Newell, Mary S; Salkowski, Lonie R; Sharpe, Richard E; Small, William; Ulaner, Gary A; Slanetz, Priscilla J
Screening mammography has been proven to reduce the mortality from breast cancer by approximately 30%, however, it is less sensitive in women with dense breast tissue and certain risk groups. Supplemental screening may be considered based on the patient's risk level and breast density. In all women, digital breast tomosynthesis improves screening sensitivity. Average-risk women with heterogeneously dense tissue may also benefit from breast MRI, abbreviated breast MRI (AB-MRI) or breast ultrasound (US). In intermediate-risk women with nondense tissue, breast MRI and ABMRI may be appropriate. In intermediate-risk women with heterogeneously dense and extremely dense tissue, breast MRI and AB-MRI are usually appropriate, whereas US and contrast-enhanced mammography (CEM) may be appropriate. Breast MRI or ABMRI is usually appropriate in all high-risk women, regardless of density. Screening breast US or CEM could be considered in this population. The American College of Radiology Appropriateness Criteria are evidence-based guidelines for specific clinical conditions that are reviewed annually by a multidisciplinary expert panel. The guideline development and revision process support the systematic analysis of the medical literature from peer reviewed journals. Established methodology principles such as Grading of Recommendations Assessment, Development, and Evaluation or GRADE are adapted to evaluate the evidence. The RAND/UCLA Appropriateness Method User Manual provides the methodology to determine the appropriateness of imaging and treatment procedures for specific clinical scenarios. In those instances where peer reviewed literature is lacking or equivocal, experts may be the primary evidentiary source available to formulate a recommendation.
PMID: 40409891
ISSN: 1558-349x
CID: 5853762

ACR Appropriateness Criteria® Ovarian Cancer Screening: 2024 Update

,; Venkatesan, Aradhana M; Kilcoyne, Aoife; Akin, Esma A; Chuang, Linus; Hindman, Nicole M; Huang, Chenchan; McCourt, Carolyn Kay; Rauch, Gaiane M; Sattari, Maryam; Schoenborn, Nancy; Schultz, David; Sertic, Madeleine; Small, William; Stein, Erica B; Suarez-Weiss, Krista; Kang, Stella K
Ovarian cancer remains low in prevalence but has the highest mortality of all gynecologic malignancies. Population-based screening for ovarian cancer remains a topic of interest in contemporary practice, given that the majority of cancers encountered are high-grade aggressive malignancies, for which favorable survival is encountered in the setting of early-stage disease. This document summarizes a review of the available data from randomized and observational trials that have evaluated the role of imaging for ovarian cancer screening in average-risk and high-risk patients. When considering screening using pelvic ultrasound in average-risk patients, we found insufficient published evidence to recommend ovarian cancer screening. Randomized controlled trials have not demonstrated a mortality benefit in this setting. Screening with pelvic ultrasound may be appropriate for select patients at high risk, although the existing data remain limited as large, randomized trials have not been performed in this setting. The American College of Radiology Appropriateness Criteria are evidence-based guidelines for specific clinical conditions that are reviewed annually by a multidisciplinary expert panel. The guideline development and revision process support the systematic analysis of the medical literature from peer reviewed journals. Established methodology principles such as Grading of Recommendations Assessment, Development, and Evaluation or GRADE are adapted to evaluate the evidence. The RAND/UCLA Appropriateness Method User Manual provides the methodology to determine the appropriateness of imaging and treatment procedures for specific clinical scenarios. In those instances where peer reviewed literature is lacking or equivocal, experts may be the primary evidentiary source available to formulate a recommendation.
PMID: 40409887
ISSN: 1558-349x
CID: 5853732

Classifying Continuous Glucose Monitoring Documents From Electronic Health Records

Zheng, Yaguang; Iturrate, Eduardo; Li, Lehan; Wu, Bei; Small, William R; Zweig, Susan; Fletcher, Jason; Chen, Zhihao; Johnson, Stephen B
BACKGROUND:Clinical use of continuous glucose monitoring (CGM) is increasing storage of CGM-related documents in electronic health records (EHR); however, the standardization of CGM storage is lacking. We aimed to evaluate the sensitivity and specificity of CGM Ambulatory Glucose Profile (AGP) classification criteria. METHODS:We randomly chose 2244 (18.1%) documents from NYU Langone Health. Our document classification algorithm: (1) separated multiple-page documents into a single-page image; (2) rotated all pages into an upright orientation; (3) determined types of devices using optical character recognition; and (4) tested for the presence of particular keywords in the text. Two experts in using CGM for research and clinical practice conducted an independent manual review of 62 (2.8%) reports. We calculated sensitivity (correct classification of CGM AGP report) and specificity (correct classification of non-CGM report) by comparing the classification algorithm against manual review. RESULTS:Among 2244 documents, 1040 (46.5%) were classified as CGM AGP reports (43.3% FreeStyle Libre and 56.7% Dexcom), 1170 (52.1%) non-CGM reports (eg, progress notes, CGM request forms, or physician letters), and 34 (1.5%) uncertain documents. The agreement for the evaluation of the documents between the two experts was 100% for sensitivity and 98.4% for specificity. When comparing the classification result between the algorithm and manual review, the sensitivity and specificity were 95.0% and 91.7%. CONCLUSION/CONCLUSIONS:Nearly half of CGM-related documents were AGP reports, which are useful for clinical practice and diabetes research; however, the remaining half are other clinical documents. Future work needs to standardize the storage of CGM-related documents in the EHR.
PMCID:11904921
PMID: 40071848
ISSN: 1932-2968
CID: 5808452

Evaluating Hospital Course Summarization by an Electronic Health Record-Based Large Language Model

Small, William R.; Austrian, Jonathan; O\Donnell, Luke; Burk-Rafel, Jesse; Hochman, Katherine A.; Goodman, Adam; Zaretsky, Jonah; Martin, Jacob; Johnson, Stephen; Major, Vincent J.; Jones, Simon; Henke, Christian; Verplanke, Benjamin; Osso, Jwan; Larson, Ian; Saxena, Archana; Mednick, Aron; Simonis, Choumika; Han, Joseph; Kesari, Ravi; Wu, Xinyuan; Heery, Lauren; Desel, Tenzin; Baskharoun, Samuel; Figman, Noah; Farooq, Umar; Shah, Kunal; Jahan, Nusrat; Kim, Jeong Min; Testa, Paul; Feldman, Jonah
ISI:001551557000002
ISSN: 2574-3805
CID: 5974192

Evaluating Large Language Models in extracting cognitive exam dates and scores

Zhang, Hao; Jethani, Neil; Jones, Simon; Genes, Nicholas; Major, Vincent J; Jaffe, Ian S; Cardillo, Anthony B; Heilenbach, Noah; Ali, Nadia Fazal; Bonanni, Luke J; Clayburn, Andrew J; Khera, Zain; Sadler, Erica C; Prasad, Jaideep; Schlacter, Jamie; Liu, Kevin; Silva, Benjamin; Montgomery, Sophie; Kim, Eric J; Lester, Jacob; Hill, Theodore M; Avoricani, Alba; Chervonski, Ethan; Davydov, James; Small, William; Chakravartty, Eesha; Grover, Himanshu; Dodson, John A; Brody, Abraham A; Aphinyanaphongs, Yindalon; Masurkar, Arjun; Razavian, Narges
Ensuring reliability of Large Language Models (LLMs) in clinical tasks is crucial. Our study assesses two state-of-the-art LLMs (ChatGPT and LlaMA-2) for extracting clinical information, focusing on cognitive tests like MMSE and CDR. Our data consisted of 135,307 clinical notes (Jan 12th, 2010 to May 24th, 2023) mentioning MMSE, CDR, or MoCA. After applying inclusion criteria 34,465 notes remained, of which 765 underwent ChatGPT (GPT-4) and LlaMA-2, and 22 experts reviewed the responses. ChatGPT successfully extracted MMSE and CDR instances with dates from 742 notes. We used 20 notes for fine-tuning and training the reviewers. The remaining 722 were assigned to reviewers, with 309 each assigned to two reviewers simultaneously. Inter-rater-agreement (Fleiss' Kappa), precision, recall, true/false negative rates, and accuracy were calculated. Our study follows TRIPOD reporting guidelines for model validation. For MMSE information extraction, ChatGPT (vs. LlaMA-2) achieved accuracy of 83% (vs. 66.4%), sensitivity of 89.7% (vs. 69.9%), true-negative rates of 96% (vs 60.0%), and precision of 82.7% (vs 62.2%). For CDR the results were lower overall, with accuracy of 87.1% (vs. 74.5%), sensitivity of 84.3% (vs. 39.7%), true-negative rates of 99.8% (98.4%), and precision of 48.3% (vs. 16.1%). We qualitatively evaluated the MMSE errors of ChatGPT and LlaMA-2 on double-reviewed notes. LlaMA-2 errors included 27 cases of total hallucination, 19 cases of reporting other scores instead of MMSE, 25 missed scores, and 23 cases of reporting only the wrong date. In comparison, ChatGPT's errors included only 3 cases of total hallucination, 17 cases of wrong test reported instead of MMSE, and 19 cases of reporting a wrong date. In this diagnostic/prognostic study of ChatGPT and LlaMA-2 for extracting cognitive exam dates and scores from clinical notes, ChatGPT exhibited high accuracy, with better performance compared to LlaMA-2. The use of LLMs could benefit dementia research and clinical care, by identifying eligible patients for treatments initialization or clinical trial enrollments. Rigorous evaluation of LLMs is crucial to understanding their capabilities and limitations.
PMCID:11634005
PMID: 39661652
ISSN: 2767-3170
CID: 5762692

The Clinical Utility of a 7-Gene Biosignature on Radiation Therapy Decision Making in Patients with Ductal Carcinoma In Situ Following Breast-Conserving Surgery: An Updated Analysis of the DCISionRT® PREDICT Study

Shah, Chirag; Whitworth, Pat; Vicini, Frank A; Narod, Steven; Gerber, Naamit; Jhawar, Sachin R; King, Tari A; Mittendorf, Elizabeth A; Willey, Shawna C; Rabinovich, Rachel; Gold, Linsey; Brown, Eric; Patel, Anushka; Vargo, John; Barry, Parul N; Rock, David; Friedman, Neil; Bedi, Gauri; Templeton, Sandra; Brown, Sheree; Gabordi, Robert; Riley, Lee; Lee, Lucy; Baron, Paul; Majithia, Lonika; Mirabeau-Beale, Kristina L; Reid, Vincent J; Hirsch, Arica; Hwang, Catherine; Pellicane, James; Maganini, Robert; Khan, Sadia; MacDermed, Dhara M; Small, William; Mittal, Karuna; Borgen, Patrick; Cox, Charles; Shivers, Steven C; Bremer, Troy
BACKGROUND:Breast-conserving surgery (BCS) followed by adjuvant radiotherapy (RT) is a standard treatment for ductal carcinoma in situ (DCIS). A low-risk patient subset that does not benefit from RT has not yet been clearly identified. The DCISionRT test provides a clinically validated decision score (DS), which is prognostic of 10-year in-breast recurrence rates (invasive and non-invasive) and is also predictive of RT benefit. This analysis presents final outcomes from the PREDICT prospective registry trial aiming to determine how often the DCISionRT test changes radiation treatment recommendations. METHODS:Overall, 2496 patients were enrolled from February 2018 to January 2022 at 63 academic and community practice sites and received DCISionRT as part of their care plan. Treating physicians reported their treatment recommendations pre- and post-test as well as the patient's preference. The primary endpoint was to identify the percentage of patients where testing led to a change in RT recommendation. The impact of the test on RT treatment recommendation was physician specialty, treatment settings, individual clinical/pathological features and RTOG 9804 like criteria. Multivariate logisitc regression analysis was used to estimate the odds ratio (ORs) for factors associated with the post-test RT recommendations. RESULTS:RT recommendation changed 38% of women, resulting in a 20% decrease in the overall recommendation of RT (p < 0.001). Of those women initially recommended no RT (n = 583), 31% were recommended RT post-test. The recommendation for RT post-test increased with increasing DS, from 29% to 66% to 91% for DS <2, DS 2-4, and DS >4, respectively. On multivariable analysis, DS had the strongest influence on final RT recommendation (odds ratio 22.2, 95% confidence interval 16.3-30.7), which was eightfold greater than clinicopathologic features. Furthermore, there was an overall change in the recommendation to receive RT in 42% of those patients meeting RTOG 9804-like low-risk criteria. CONCLUSIONS:The test results provided information that changes treatment recommendations both for and against RT use in large population of women with DCIS treated in a variety of clinical settings. Overall, clinicians changed their recommendations to include or omit RT for 38% of women based on the test results. Based on published clinical validations and the results from current study, DCISionRT may aid in preventing the over- and undertreatment of clinicopathological 'low-risk' and 'high-risk' DCIS patients. TRIAL REGISTRATION/BACKGROUND:ClinicalTrials.gov identifier: NCT03448926 ( https://clinicaltrials.gov/study/NCT03448926 ).
PMCID:11300542
PMID: 38916700
ISSN: 1534-4681
CID: 5973052

Clinical research in endometrial cancer: consensus recommendations from the Gynecologic Cancer InterGroup

Creutzberg, Carien L; Kim, Jae-Weon; Eminowicz, Gemma; Allanson, Emma; Eberst, Lauriane; Kim, Se Ik; Nout, Remi A; Park, Jeong-Yeol; Lorusso, Domenica; Mileshkin, Linda; Ottevanger, Petronella B; Brand, Alison; Mezzanzanica, Delia; Oza, Amit; Gebski, Val; Pothuri, Bhavana; Batley, Tania; Gordon, Carol; Mitra, Tina; White, Helen; Howitt, Brooke; Matias-Guiu, Xavier; Ray-Coquard, Isabelle; Gaffney, David; Small, William; Miller, Austin; Concin, Nicole; Powell, Matthew A; Stuart, Gavin; Bookman, Michael A; ,
The Gynecologic Cancer InterGroup (GCIG) Endometrial Cancer Consensus Conference on Clinical Research (ECCC) was held in Incheon, South Korea, Nov 2-3, 2023. The aims were to develop consensus statements for future trials in endometrial cancer to achieve harmonisation on design elements, select important questions, and identify unmet needs. All 33 GCIG member groups participated in the development, refinement, and finalisation of 18 statements within four topic groups, addressing adjuvant treatment in high-risk disease; treatment for metastatic and recurrent disease; trial designs for rare endometrial cancer subgroups and special circumstances; and specific methodology and adaptation for trials in low-resource settings. In addition, eight areas of unmet need were identified. This was the first GCIG Consensus Conference to include patient advocates and an expert on inclusion, diversity, equity, and access to take part in all aspects of the process and output. Four early-career investigators were also selected for participation, ensuring that they represented different GCIG member groups and regions. Unanimous consensus was obtained for 16 of the 18 statements, with 97% concordance for the remaining two. Using the described methodology from previous Ovarian Cancer Consensus Conferences, this conference did not require even one minority statement. The high acceptance rate following active involvement in the preparation, discussion, and refinement of the statements by all representatives confirmed the consensus progress within a global academic setting, and the expectation that the ECCC will lead to greater harmonisation, actualisation, inclusion, and resolution of unmet needs in clinical research for individuals living with and beyond endometrial cancer worldwide.
PMID: 39214113
ISSN: 1474-5488
CID: 5702082

Enhancing Secure Messaging in Electronic Health Records: Evaluating the Impact of Emoji Chat Reactions on the Volume of Interruptive Notifications

Will, John; Small, William; Iturrate, Eduardo; Testa, Paul; Feldman, Jonah
ORIGINAL:0017336
ISSN: 2566-9346
CID: 5686602