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New Clinically Feasible 3T MRI Protocol to Discriminate Internal Brain Stem Anatomy

Hoch, M J; Chung, S; Ben-Eliezer, N; Bruno, M T; Fatterpekar, G M; Shepherd, T M
Two new 3T MR imaging contrast methods, track density imaging and echo modulation curve T2 mapping, were combined with simultaneous multisection acquisition to reveal exquisite anatomic detail at 7 canonical levels of the brain stem. Compared with conventional MR imaging contrasts, many individual brain stem tracts and nuclear groups were directly visualized for the first time at 3T. This new approach is clinically practical and feasible (total scan time = 20 minutes), allowing better brain stem anatomic localization and characterization.
PMCID:4907846
PMID: 26869471
ISSN: 1936-959x
CID: 2009812

Accelerated and motion-robust in vivo T mapping from radially undersampled data using bloch-simulation-based iterative reconstruction

Ben-Eliezer, Noam; Sodickson, Daniel K; Shepherd, Timothy; Wiggins, Graham C; Block, Kai Tobias
PURPOSE: Development of a quantitative transverse relaxation time (T2 )-mapping platform that operates at clinically feasible timescales by employing advanced image reconstruction of radially undersampled multi spin-echo (MSE) datasets. METHODS: Data was acquired on phantom and in vivo at 3 Tesla using MSE protocols employing radial k-space sampling trajectories. In order to overcome the nontrivial spin evolution associated with MSE protocols, a numerical signal model was precalculated based on Bloch simulations of the actual pulse-sequence scheme used in the acquisition process. This signal model was subsequently incorporated into an iterative model-based image reconstruction process, producing T2 and proton-density maps. RESULTS: T2 maps of phantom and in vivo brain were successfully constructed, closely matching values produced by a single spin-echo reference scan. High-resolution mapping was also performed for the spinal cord in vivo, differentiating the underlying gray/white matter morphology. CONCLUSION: The presented MSE data-processing framework offers reliable mapping of T2 relaxation values in a approximately 5-minute timescale, free of user- and scanner-dependent variations. The use of radial k-space sampling provides further advantages in the form of high immunity to irregular physiological motion, as well as enhanced spatial resolutions, owing to its inherent ability to perform alias-free limited field-of-view imaging. Magn Reson Med, 2015. (c) 2015 Wiley Periodicals, Inc.
PMCID:4609223
PMID: 25891292
ISSN: 1522-2594
CID: 1543012

The rapid imaging renaissance: sparser samples, denser dimensions, and glimmerings of a grand unified tomography [Meeting Abstract]

Sodickson, Daniel K; Feng, Li; Knoll, Florian; Cloos, Martijn; Ben-Eliezer, Noam; Axel, Leon; Chandarana, Hersh; Block, Tobias; Otazo, Ricardo
The task of imaging is to gather spatiotemporal information which can be organized into a coherent map. Tomographic imaging in particular involves the use of multiple projections, or other interactions of a probe (light, sound, etc.) with a body, in order to determine cross-sectional information. Though the probes and the corresponding imaging modalities may vary, and though the methodology of particular imaging approaches is in constant ferment, the conceptual underpinnings of tomographic imaging have in many ways remained fixed for many decades. Recent advances in applied mathematics, however, have begun to roil this intellectual landscape. The advent of compressed sensing, anticipated in various algorithms dating back many years but unleashed in full theoretical force in the last decade, has changed the way imagers have begun to think about data acquisition and image reconstruction. The power of incoherent sampling and sparsity-enforcing reconstruction has been demonstrated in various contexts and, when combined with other modern fast imaging techniques, has enabled unprecedented increases in imaging efficiency. Perhaps more importantly, however, such approaches have spurred a shift in perspective, prompting us to focus less on nominal data sufficiency than on information content. Beginning with examples from MRI, then proceeding through selected other modalities such as CT and PET, as well as multimodality combinations, this paper explores the potential of newly evolving acquisition and reconstruction paradigms to change the way we do imaging in the lab and in the clinic.
ISI:000355665600014
ISSN: 0277-786x
CID: 2061802

Super-resolved parallel MRI by spatiotemporal encoding

Schmidt, Rita; Baishya, Bikash; Ben-Eliezer, Noam; Seginer, Amir; Frydman, Lucio
Recent studies described an "ultrafast" scanning method based on spatiotemporal (SPEN) principles. SPEN demonstrates numerous potential advantages over EPI-based alternatives, at no additional expense in experimental complexity. An important aspect that SPEN still needs to achieve for providing a competitive ultrafast MRI acquisition alternative, entails exploiting parallel imaging algorithms without compromising its proven capabilities. The present work introduces a combination of multi-band frequency-swept pulses simultaneously encoding multiple, partial fields-of-view, together with a new algorithm merging a Super-Resolved SPEN image reconstruction and SENSE multiple-receiving methods. This approach enables one to reduce both the excitation and acquisition times of sub-second SPEN acquisitions by the customary acceleration factor R, without compromises in either the method's spatial resolution, SAR deposition, or capability to operate in multi-slice mode. The performance of these new single-shot imaging sequences and their ancillary algorithms were explored and corroborated on phantoms and human volunteers at 3 T. The gains of the parallelized approach were particularly evident when dealing with heterogeneous systems subject to major T2/T2* effects, as is the case upon single-scan imaging near tissue/air interfaces.
PMCID:5081100
PMID: 24120293
ISSN: 0730-725x
CID: 1082442

Functional MRI using super-resolved spatiotemporal encoding

Ben-Eliezer, Noam; Goerke, Ute; Ugurbil, Kamil; Frydman, Lucio
Recently, new ultrafast imaging sequences such as rapid acquisition by sequential excitation and refocusing (RASER) and hybrid spatiotemporal encoding (SPEN) magnetic resonance imaging (MRI) have been proposed, in which the phase encoding of conventional echo planar imaging (EPI) is replaced with a SPEN. In contrast to EPI, SPEN provides significantly higher immunity to frequency heterogeneities including those caused by B(0) inhomogeneities and chemical shift offsets. Utilizing the inherent robustness of SPEN, it was previously shown that RASER can be used to successfully perform functional MRI (fMRI) experiments in the orbitofrontal cortex--a task which is challenging using EPI due to strong magnetic susceptibility variation near the air-filled sinuses. Despite this superior performance, systematic analyses have shown that, in its initial implementation, the use of SPEN was penalized by lower signal-to-noise ratio (SNR) and higher radiofrequency power deposition as compared to EPI-based methods. A recently developed reconstruction algorithm based on super-resolution principles is able to alleviate both of these shortcomings; the use of this algorithm is hereby explored within an fMRI context. Specifically, a series of fMRI measurements on the human visual cortex confirmed that the super-resolution algorithm retains the statistical significance of the blood oxygenation level dependent (BOLD) response, while significantly reducing the power deposition associated with SPEN and restoring the SNR to levels that are comparable with those of EPI.
PMCID:3477291
PMID: 22789843
ISSN: 0730-725x
CID: 1082462

Fully refocused multi-shot spatiotemporally encoded MRI: robust imaging in the presence of metallic implants

Ben-Eliezer, Noam; Solomon, Eddy; Harel, Elad; Nevo, Nava; Frydman, Lucio
OBJECT: An approach has been recently introduced for acquiring arbitrary 2D NMR spectra or images in a single scan, based on the use of frequency-swept RF pulses for the sequential excitation and acquisition of the spins response. This spatiotemporal-encoding (SPEN) approach enables a unique, voxel-by-voxel refocusing of all frequency shifts in the sample, for all instants throughout the data acquisition. The present study investigates the use of this full-refocusing aspect of SPEN-based imaging in the multi-shot MRI of objects, subject to sizable field inhomogeneities that complicate conventional imaging approaches. MATERIALS AND METHODS: 2D MRI experiments were performed at 7 T on phantoms and on mice in vivo, focusing on imaging in proximity to metallic objects. Fully refocused SPEN-based spin echo imaging sequences were implemented, using both Cartesian and back-projection trajectories, and compared with k-space encoded spin echo imaging schemes collected on identical samples under equal bandwidths and acquisition timing conditions. RESULTS: In all cases assayed, the fully refocused spatiotemporally encoded experiments evidenced a ca. 50 % reduction in signal dephasing in the proximity of the metal, as compared to analogous results stemming from the k-space encoded spin echo counterparts. CONCLUSION: The results in this study suggest that SPEN-based acquisition schemes carry the potential to overcome strong field inhomogeneities, of the kind that currently preclude high-field, high-resolution tissue characterizations in the neighborhood of metallic implants.
PMID: 22743822
ISSN: 0968-5243
CID: 1082452

Spatiotemporal encoding as a robust basis for fast three-dimensional in vivo MRI

Ben-Eliezer, Noam; Frydman, Lucio
Recent studies have described some of the new opportunities that have arisen within the context of ultrafast two-dimensional imaging with the advent of spatiotemporal encoding methods. This article explores the potential of integrating these non-Fourier, single-scan, two-dimensional MRI principles, with multi-slice and phase-encoding schemes acting along a third dimension. In unison, these combinations enable the acquisition of complete three-dimensional images from volumes of interest within a 1-s timescale. A number of alternatives are explored for carrying out these very rapid three-dimensional acquisitions, including the use of two-dimensional, slice-selective, spatiotemporal encoding radiofrequency pulses, driven-equilibrium slice-selective schemes, and phase-encoded volumetric approaches. When tested under in vivo conditions, the 'hybrid' schemes combining spatiotemporal encoding with k-encoding imaging principles, proved to be superior to traditional schemes based on echo planar imaging. The resulting images were found to be less affected by field inhomogeneities and by other potential offset-derived distortions owing to a combination of factors whose origin is discussed. Further features, extensions and applications of these principles are also addressed.
PMCID:5040489
PMID: 21360603
ISSN: 0952-3480
CID: 1082472

Super-resolved spatially encoded single-scan 2D MRI

Ben-Eliezer, Noam; Irani, Michal; Frydman, Lucio
Single-scan MRI underlies a wide variety of clinical and research activities, including functional and diffusion studies. Most common among these "ultrafast" MRI approaches is echo-planar imaging. Notwithstanding its proven success, echo-planar imaging still faces a number of limitations, particularly as a result of susceptibility heterogeneities and of chemical shift effects that can become acute at high fields. The present study explores a new approach for acquiring multidimensional MR images in a single scan, which possesses a higher built-in immunity to this kind of heterogeneity while retaining echo-planar imaging's temporal and spatial performances. This new protocol combines a novel approach to multidimensional spectroscopy, based on the spatial encoding of the spin interactions, with image reconstruction algorithms based on super-resolution principles. Single-scan two-dimensional MRI examples of the performance improvements provided by the resulting imaging protocol are illustrated using phantom-based and in vivo experiments.
PMID: 20512863
ISSN: 0740-3194
CID: 1082482

High-definition, single-scan 2D MRI in inhomogeneous fields using spatial encoding methods

Ben-Eliezer, Noam; Shrot, Yoav; Frydman, Lucio
An approach has been recently introduced for acquiring two-dimensional (2D) nuclear magnetic resonance images in a single scan, based on the spatial encoding of the spin interactions. This article explores the potential of integrating this spatial encoding together with conventional temporal encoding principles, to produce 2D single-shot images with moderate field of views. The resulting "hybrid" imaging scheme is shown to be superior to traditional schemes in non-homogeneous magnetic field environments. An enhancement of previously discussed pulse sequences is also proposed, whereby distortions affecting the image along the spatially encoded axis are eliminated. This new variant is also characterized by a refocusing of T(2)(*) effects, leading to a restoration of high-definition images for regions which would otherwise be highly dephased and thus not visible. These single-scan 2D images are characterized by improved signal-to-noise ratios and a genuine T(2) contrast, albeit not free from inhomogeneity distortions. Simple postprocessing algorithms relying on inhomogeneity phase maps of the imaged object can successfully remove most of these residual distortions. Initial results suggest that this acquisition scheme has the potential to overcome strong field inhomogeneities acting over extended acquisition durations, exceeding 100 ms for a single-shot image.
PMID: 19608367
ISSN: 0730-725x
CID: 1082492