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Evolutionary predictability of genetic versus nongenetic resistance to anticancer drugs in melanoma

Marin-Bejar, Oskar; Rogiers, Aljosja; Dewaele, Michael; Femel, Julia; Karras, Panagiotis; Pozniak, Joanna; Bervoets, Greet; Van Raemdonck, Nina; Pedri, Dennis; Swings, Toon; Demeulemeester, Jonas; Borght, Sara Vander; Lehnert, Stefan; Bosisio, Francesca; van den Oord, Joost J; Bempt, Isabelle Vanden; Lambrechts, Diether; Voet, Thierry; Bechter, Oliver; Rizos, Helen; Levesque, Mitchell P; Leucci, Eleonora; Lund, Amanda W; Rambow, Florian; Marine, Jean-Christophe
Therapy resistance arises from heterogeneous drug-tolerant persister cells or minimal residual disease (MRD) through genetic and nongenetic mechanisms. A key question is whether specific molecular features of the MRD ecosystem determine which of these two distinct trajectories will eventually prevail. We show that, in melanoma exposed to mitogen-activated protein kinase therapeutics, emergence of a transient neural crest stem cell (NCSC) population in MRD concurs with the development of nongenetic resistance. This increase relies on a glial cell line-derived neurotrophic factor-dependent signaling cascade, which activates the AKT survival pathway in a focal adhesion kinase (FAK)-dependent manner. Ablation of the NCSC population through FAK inhibition delays relapse in patient-derived tumor xenografts. Strikingly, all tumors that ultimately escape this treatment exhibit resistance-conferring genetic alterations and increased sensitivity to extracellular signal-regulated kinase inhibition. These findings identify an approach that abrogates the nongenetic resistance trajectory in melanoma and demonstrate that the cellular composition of MRD deterministically imposes distinct drug resistance evolutionary paths.
PMID: 34143978
ISSN: 1878-3686
CID: 4918952

Computational Drug Repositioning Identifies Statins as Modifiers of Prognostic Genetic Expression Signatures and Metastatic Behavior in Melanoma

Yu, Wesley Y; Hill, Sheena T; Chan, E Ricky; Pink, John J; Cooper, Kevin; Leachman, Sancy; Lund, Amanda W; Kulkarni, Rajan; Bordeaux, Jeremy S
Despite advances in melanoma treatment, more than 70% of patients with distant metastasis die within 5 years. Proactive treatment of early melanoma to prevent metastasis could save lives and reduce overall healthcare costs. Currently, there are no treatments specifically designed to prevent early melanoma from progressing to metastasis. We used the Connectivity Map to conduct an in silico drug screen and identified 3-hydroxy-3-methylglutaryl-coenzyme A reductase inhibitors (statins) as a drug class that might prevent melanoma metastasis. To confirm the in vitro effect of statins, RNA sequencing was completed on A375 cells after treatment with fluvastatin to describe changes in the melanoma transcriptome. Statins induced differential expression in genes associated with metastasis and are used in commercially available prognostic tests for melanoma metastasis. Finally, we completed a chart review of 475 patients with melanoma. Patients taking statins were less likely to have metastasis at the time of melanoma diagnosis in both univariate and multivariate analyses (24.7% taking statins vs. 37.6% not taking statins, absolute risk reduction = 12.9%, P = 0.038). These findings suggest that statins might be useful as a treatment to prevent melanoma metastasis. Prospective trials are required to verify our findings and to determine the mechanism of metastasis prevention.
PMID: 33417917
ISSN: 1523-1747
CID: 4798582

Melanoma models for the next generation of therapies

Patton, E Elizabeth; Mueller, Kristen L; Adams, David J; Anandasabapathy, Niroshana; Aplin, Andrew E; Bertolotto, Corine; Bosenberg, Marcus; Ceol, Craig J; Burd, Christin E; Chi, Ping; Herlyn, Meenhard; Holmen, Sheri L; Karreth, Florian A; Kaufman, Charles K; Khan, Shaheen; Kobold, Sebastian; Leucci, Eleonora; Levy, Carmit; Lombard, David B; Lund, Amanda W; Marie, Kerrie L; Marine, Jean-Christophe; Marais, Richard; McMahon, Martin; Robles-Espinoza, Carla Daniela; Ronai, Ze'ev A; Samuels, Yardena; Soengas, Maria S; Villanueva, Jessie; Weeraratna, Ashani T; White, Richard M; Yeh, Iwei; Zhu, Jiyue; Zon, Leonard I; Hurlbert, Marc S; Merlino, Glenn
There is a lack of appropriate melanoma models that can be used to evaluate the efficacy of novel therapeutic modalities. Here, we discuss the current state of the art of melanoma models including genetically engineered mouse, patient-derived xenograft, zebrafish, and ex vivo and in vitro models. We also identify five major challenges that can be addressed using such models, including metastasis and tumor dormancy, drug resistance, the melanoma immune response, and the impact of aging and environmental exposures on melanoma progression and drug resistance. Additionally, we discuss the opportunity for building models for rare subtypes of melanomas, which represent an unmet critical need. Finally, we identify key recommendations for melanoma models that may improve accuracy of preclinical testing and predict efficacy in clinical trials, to help usher in the next generation of melanoma therapies.
PMID: 33545064
ISSN: 1878-3686
CID: 4799682

Building new roads to stronger immunity

Wilson, John T; Lund, Amanda W
A new cancer vaccine technology builds a network of local lymphatic vessels that paves the way to stronger responses to immunotherapy.
PMID: 33762349
ISSN: 2375-2548
CID: 4823612

Afferent Lymphatic Transport and Peripheral Tissue Immunity

Steele, Maria M; Lund, Amanda W
Lymphatic vessels provide an anatomical framework for immune surveillance and adaptive immune responses. Although appreciated as the route for Ag and dendritic cell transport, peripheral lymphatic vessels are often not considered active players in immune surveillance. Lymphatic vessels, however, integrate contextual cues that directly regulate transport, including changes in intrinsic pumping and capillary remodeling, and express a dynamic repertoire of inflammatory chemokines and adhesion molecules that facilitates leukocyte egress out of inflamed tissue. These mechanisms together contribute to the course of peripheral tissue immunity. In this review, we focus on context-dependent mechanisms that regulate fluid and cellular transport out of peripheral nonlymphoid tissues to provide a framework for understanding the effects of afferent lymphatic transport on immune surveillance, peripheral tissue inflammation, and adaptive immunity.
PMID: 33397740
ISSN: 1550-6606
CID: 4739632

Lymph: (Fe)rrying Melanoma to Safety

Lund, Amanda W; Soengas, Maria S
Lymph nodes are typically the first clinically detectable site of metastasis in melanoma, but the mechanisms that determine this preference are not well understood. An article in Nature reports that the unique composition of lymph may protect melanoma cells from ferroptosis-a form of iron-dependent cell death, thereby increasing metastatic efficiency.
PMID: 32916127
ISSN: 1878-3686
CID: 4650232

Melanoma to Vitiligo: The Melanocyte in Biology & Medicine-Joint Montagna Symposium on the Biology of Skin/PanAmerican Society for Pigment Cell Research Annual Meeting

Leachman, Sancy A; Hornyak, Thomas J; Barsh, Greg; Bastian, Boris C; Brash, Douglas E; Cleaver, James E; Cooper, Cynthia D; D'Orazio, John A; Fujita, Mayumi; Holmen, Sheri L; Indra, Arup K; Kramer, Kenneth H; Le Poole, I Caroline; Lo, Roger S; Lund, Amanda W; Manga, Prashiela; Pavan, William J; Setaluri, Vijayasaradhi; Stemwedel, Clara E; Kulesz-Martin, Molly F
PMID: 31348921
ISSN: 1523-1747
CID: 3988362

The Biophysics of Lymphatic Transport: Engineering Tools and Immunological Consequences

O'Melia, Meghan J; Lund, Amanda W; Thomas, Susan N
Lymphatic vessels mediate fluid flows that affect antigen distribution and delivery, lymph node stromal remodeling, and cell-cell interactions, to thus regulate immune activation. Here we review the functional role of lymphatic transport and lymph node biomechanics in immunity. We present experimental tools that enable quantitative analysis of lymphatic transport and lymph node dynamics in vitro and in vivo. Finally, we discuss the current understanding for how changes in lymphatic transport and lymph node biomechanics contribute to pathogenesis of conditions including cancer, aging, neurodegeneration, and infection.
PMID: 31739172
ISSN: 2589-0042
CID: 4192952

Quantifying Leukocyte Egress via Lymphatic Vessels from Murine Skin and Tumors

Steele, Maria M; Churchill, Madeline J; Breazeale, Alec P; Lane, Ryan S; Nelson, Nicholas A; Lund, Amanda W
Leukocyte egress from peripheral tissues to draining lymph nodes is not only critical for immune surveillance and initiation but also contributes to the resolution of peripheral tissue responses. While a variety of methods are used to quantify leukocyte egress from non-lymphoid, peripheral tissues, the cellular and molecular mechanisms that govern context-dependent egress remain poorly understood. Here, we describe the use of in situ photoconversion for quantitative analysis of leukocyte egress from murine skin and tumors. Photoconversion allows for the direct labeling of leukocytes resident within cutaneous tissue. Though skin exposure to violet light induces local inflammatory responses characterized by leukocyte infiltrates and vascular leakiness, in a head-to-head comparison with transdermal application of fluorescent tracers, photoconversion specifically labeled migratory dendritic cell populations and simultaneously enabled the quantification of myeloid and lymphoid egress from cutaneous microenvironments and tumors. The mechanisms of leukocyte egress remain a missing component in our understanding of intratumoral leukocyte complexity, and thus the application of the tools described herein will provide unique insight into the dynamics of tumor immune microenvironments both at steady state and in response to therapy.
PMID: 30663703
ISSN: 1940-087x
CID: 4192942

Editorial: Regulation of Immune Function by the Lymphatic Vasculature [Editorial]

Tamburini, Beth Ann Jiron; Padera, Timothy P; Lund, Amanda W
PMCID:6856668
PMID: 31781105
ISSN: 1664-3224
CID: 4238032