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In vivo evidence of microstructural hypo-connectivity of brain white matter in 22q11.2 deletion syndrome

Raven, Erika P; Veraart, Jelle; Kievit, Rogier A; Genc, Sila; Ward, Isobel L; Hall, Jessica; Cunningham, Adam; Doherty, Joanne; van den Bree, Marianne B M; Jones, Derek K
22q11.2 deletion syndrome, or 22q11.2DS, is a genetic syndrome associated with high rates of schizophrenia and autism spectrum disorders, in addition to widespread structural and functional abnormalities throughout the brain. Experimental animal models have identified neuronal connectivity deficits, e.g., decreased axonal length and complexity of axonal branching, as a primary mechanism underlying atypical brain development in 22q11.2DS. However, it is still unclear whether deficits in axonal morphology can also be observed in people with 22q11.2DS. Here, we provide an unparalleled in vivo characterization of white matter microstructure in participants with 22q11.2DS (12-15 years) and those undergoing typical development (8-18 years) using a customized magnetic resonance imaging scanner which is sensitive to axonal morphology. A rich array of diffusion MRI metrics are extracted to present microstructural profiles of typical and atypical white matter development, and provide new evidence of connectivity differences in individuals with 22q11.2DS. A recent, large-scale consortium study of 22q11.2DS identified higher diffusion anisotropy and reduced overall diffusion mobility of water as hallmark microstructural alterations of white matter in individuals across a wide age range (6-52 years). We observed similar findings across the white matter tracts included in this study, in addition to identifying deficits in axonal morphology. This, in combination with reduced tract volume measurements, supports the hypothesis that abnormal microstructural connectivity in 22q11.2DS may be mediated by densely packed axons with disproportionately small diameters. Our findings provide insight into the in vivo white matter phenotype of 22q11.2DS, and promote the continued investigation of shared features in neurodevelopmental and psychiatric disorders.
PMID: 37495890
ISSN: 1476-5578
CID: 5591732

Novel insights into axon diameter and myelin content in late childhood and adolescence

Genc, Sila; Raven, Erika P; Drakesmith, Mark; Blakemore, Sarah-Jayne; Jones, Derek K
White matter microstructural development in late childhood and adolescence is driven predominantly by increasing axon density and myelin thickness. Ex vivo studies suggest that the increase in axon diameter drives developmental increases in axon density observed with pubertal onset. In this cross-sectional study, 50 typically developing participants aged 8-18 years were scanned using an ultra-strong gradient magnetic resonance imaging scanner. Microstructural properties, including apparent axon diameter $({d}_a)$, myelin content, and g-ratio, were estimated in regions of the corpus callosum. We observed age-related differences in ${d}_a$, myelin content, and g-ratio. In early puberty, males had larger ${d}_a$ in the splenium and lower myelin content in the genu and body of the corpus callosum, compared with females. Overall, this work provides novel insights into developmental, pubertal, and cognitive correlates of individual differences in apparent axon diameter and myelin content in the developing human brain.
PMCID:10183755
PMID: 36610731
ISSN: 1460-2199
CID: 5499252

White matter microstructure in face and body networks predicts facial expression and body posture perception across development

Ward, Isobel L; Raven, Erika P; de la Rosa, Stephan; Jones, Derek K; Teufel, Christoph; von dem Hagen, Elisabeth
Facial expression and body posture recognition have protracted developmental trajectories. Interactions between face and body perception, such as the influence of body posture on facial expression perception, also change with development. While the brain regions underpinning face and body processing are well-defined, little is known about how white-matter tracts linking these regions relate to perceptual development. Here, we obtained complementary diffusion magnetic resonance imaging (MRI) measures (fractional anisotropy [FA], spherical mean Ṧμ ), and a quantitative MRI myelin-proxy measure (R1), within white-matter tracts of face- and body-selective networks in children and adolescents and related these to perceptual development. In tracts linking occipital and fusiform face areas, facial expression perception was predicted by age-related maturation, as measured by Ṧμ and R1, as well as age-independent individual differences in microstructure, captured by FA and R1. Tract microstructure measures linking posterior superior temporal sulcus body region with anterior temporal lobe (ATL) were related to the influence of body on facial expression perception, supporting ATL as a site of face and body network convergence. Overall, our results highlight age-dependent and age-independent constraints that white-matter microstructure poses on perceptual abilities during development and the importance of complementary microstructural measures in linking brain structure and behaviour.
PMCID:10028674
PMID: 36661194
ISSN: 1097-0193
CID: 5499262

Toward next-generation primate neuroscience: A collaboration-based strategic plan for integrative neuroimaging

Milham, Michael; Petkov, Chris; Belin, Pascal; Ben Hamed, Suliann; Evrard, Henry; Fair, Damien; Fox, Andrew; Froudist-Walsh, Sean; Hayashi, Takuya; Kastner, Sabine; Klink, Chris; Majka, Piotr; Mars, Rogier; Messinger, Adam; Poirier, Colline; Schroeder, Charles; Shmuel, Amir; Silva, Afonso C; Vanduffel, Wim; Van Essen, David C; Wang, Zheng; Roe, Anna Wang; Wilke, Melanie; Xu, Ting; Aarabi, Mohammad Hadi; Adolphs, Ralph; Ahuja, Aarit; Alvand, Ashkan; Amiez, Celine; Autio, Joonas; Azadi, Reza; Baeg, Eunha; Bai, Ruiliang; Bao, Pinglei; Basso, Michele; Behel, Austin K; Bennett, Yvonne; Bernhardt, Boris; Biswal, Bharat; Boopathy, Sethu; Boretius, Susann; Borra, Elena; Boshra, Rober; Buffalo, Elizabeth; Cao, Long; Cavanaugh, James; Celine, Amiez; Chavez, Gianfranco; Chen, Li Min; Chen, Xiaodong; Cheng, Luqi; Chouinard-Decorte, Francois; Clavagnier, Simon; Cléry, Justine; Colcombe, Stan J; Conway, Bevil; Cordeau, Melina; Coulon, Olivier; Cui, Yue; Dadarwal, Rakshit; Dahnke, Robert; Desrochers, Theresa; Deying, Li; Dougherty, Kacie; Doyle, Hannah; Drzewiecki, Carly M; Duyck, Marianne; Arachchi, Wasana Ediri; Elorette, Catherine; Essamlali, Abdelhadi; Evans, Alan; Fajardo, Alfonso; Figueroa, Hector; Franco, Alexandre; Freches, Guilherme; Frey, Steve; Friedrich, Patrick; Fujimoto, Atsushi; Fukunaga, Masaki; Gacoin, Maeva; Gallardo, Guillermo; Gao, Lixia; Gao, Yang; Garside, Danny; Garza-Villarreal, Eduardo A; Gaudet-Trafit, Maxime; Gerbella, Marzio; Giavasis, Steven; Glen, Daniel; Ribeiro Gomes, Ana Rita; Torrecilla, Sandra Gonzalez; Gozzi, Alessandro; Gulli, Roberto; Haber, Suzanne; Hadj-Bouziane, Fadila; Fujimoto, Satoka Hashimoto; Hawrylycz, Michael; He, Quansheng; He, Ye; Heuer, Katja; Hiba, Bassem; Hoffstaedter, Felix; Hong, Seok-Jun; Hori, Yuki; Hou, Yujie; Howard, Amy; de la Iglesia-Vaya, Maria; Ikeda, Takuro; Jankovic-Rapan, Lucija; Jaramillo, Jorge; Jedema, Hank P; Jin, Hecheng; Jiang, Minqing; Jung, Benjamin; Kagan, Igor; Kahn, Itamar; Kiar, Gregory; Kikuchi, Yuki; Kilavik, Bjørg; Kimura, Nobuyuki; Klatzmann, Ulysse; Kwok, Sze Chai; Lai, Hsin-Yi; Lamberton, Franck; Lehman, Julia; Li, Pengcheng; Li, Xinhui; Li, Xinjian; Liang, Zhifeng; Liston, Conor; Little, Roger; Liu, Cirong; Liu, Ning; Liu, Xiaojin; Liu, Xinyu; Lu, Haidong; Loh, Kep Kee; Madan, Christopher; Magrou, Loïc; Margulies, Daniel; Mathilda, Froesel; Mejia, Sheyla; Meng, Yao; Menon, Ravi; Meunier, David; Mitchell, A J; Mitchell, Anna; Murphy, Aidan; Mvula, Towela; Ortiz-Rios, Michael; Ortuzar Martinez, Diego Emanuel; Pagani, Marco; Palomero-Gallagher, Nicola; Pareek, Vikas; Perkins, Pierce; Ponce, Fernanda; Postans, Mark; Pouget, Pierre; Qian, Meizhen; Ramirez, Julian Bene; Raven, Erika; Restrepo, Isabel; Rima, Samy; Rockland, Kathleen; Rodriguez, Nadira Yusif; Roger, Elise; Hortelano, Eduardo Rojas; Rosa, Marcello; Rossi, Andrew; Rudebeck, Peter; Russ, Brian; Sakai, Tomoko; Saleem, Kadharbatcha S; Sallet, Jerome; Sawiak, Stephen; Schaeffer, David; Schwiedrzik, Caspar M; Seidlitz, Jakob; Sein, Julien; Sharma, Jitendra; Shen, Kelly; Sheng, Wei-An; Shi, Neo Sunhang; Shim, Won Mok; Simone, Luciano; Sirmpilatze, Nikoloz; Sivan, Virginie; Song, Xiaowei; Tanenbaum, Aaron; Tasserie, Jordy; Taylor, Paul; Tian, Xiaoguang; Toro, Roberto; Trambaiolli, Lucas; Upright, Nick; Vezoli, Julien; Vickery, Sam; Villalon, Julio; Wang, Xiaojie; Wang, Yufan; Weiss, Alison R; Wilson, Charlie; Wong, Ting-Yat; Woo, Choong-Wan; Wu, Bichan; Xiao, Du; Xu, Augix Guohua; Xu, Dongrong; Xufeng, Zhou; Yacoub, Essa; Ye, Ningrong; Ying, Zhang; Yokoyama, Chihiro; Yu, Xiongjie; Yue, Shasha; Yuheng, Lu; Yumeng, Xin; Zaldivar, Daniel; Zhang, Shaomin; Zhao, Yuguang; Zuo, Zhanguang
Open science initiatives are creating opportunities to increase research coordination and impact in nonhuman primate (NHP) imaging. The PRIMatE Data and Resource Exchange community recently developed a collaboration-based strategic plan to advance NHP imaging as an integrative approach for multiscale neuroscience.
PMID: 34731649
ISSN: 1097-4199
CID: 5499342

In Vivo Evidence of Microstructural Hypo-Connectivity of Brain White Matter in 22q11.2 Deletion Syndrome [Meeting Abstract]

Raven, Erika; Veraart, Jelle; Kievit, Rogier; Genc, Sila; Ward, Isobel; Cunningham, Adam; Doherty, Joanne; van den Bree, Marianne; Jones, Derek
ISI:000789022201004
ISSN: 0006-3223
CID: 5499322

Detecting microstructural deviations in individuals with deep diffusion MRI tractometry

Chamberland, Maxime; Genc, Sila; Tax, Chantal M W; Shastin, Dmitri; Koller, Kristin; Raven, Erika P; Cunningham, Adam; Doherty, Joanne; van den Bree, Marianne B M; Parker, Greg D; Hamandi, Khalid; Gray, William P; Jones, Derek K
Most diffusion magnetic resonance imaging studies of disease rely on statistical comparisons between large groups of patients and healthy participants to infer altered tissue states in the brain; however, clinical heterogeneity can greatly challenge their discriminative power. There is currently an unmet need to move away from the current approach of group-wise comparisons to methods with the sensitivity to detect altered tissue states at the individual level. This would ultimately enable the early detection and interpretation of microstructural abnormalities in individual patients, an important step towards personalized medicine in translational imaging. To this end, Detect was developed to advance diffusion magnetic resonance imaging tractometry towards single-patient analysis. By operating on the manifold of white-matter pathways and learning normative microstructural features, our framework captures idiosyncrasies in patterns along white-matter pathways. Our approach paves the way from traditional group-based comparisons to true personalized radiology, taking microstructural imaging from the bench to the bedside.
PMCID:7613101
PMID: 35865756
ISSN: 2662-8457
CID: 5499242

The variability of MR axon radii estimates in the human white matter

Veraart, Jelle; Raven, Erika P; Edwards, Luke J; Weiskopf, Nikolaus; Jones, Derek K
The noninvasive quantification of axonal morphology is an exciting avenue for gaining understanding of the function and structure of the central nervous system. Accurate non-invasive mapping of micron-sized axon radii using commonly applied neuroimaging techniques, that is, diffusion-weighted MRI, has been bolstered by recent hardware developments, specifically MR gradient design. Here the whole brain characterization of the effective MR axon radius is presented and the inter- and intra-scanner test-retest repeatability and reproducibility are evaluated to promote the further development of the effective MR axon radius as a neuroimaging biomarker. A coefficient-of-variability of approximately 10% in the voxelwise estimation of the effective MR radius is observed in the test-retest analysis, but it is shown that the performance can be improved fourfold using a customized along-tract analysis.
PMID: 33576105
ISSN: 1097-0193
CID: 4780142

MICRA: Microstructural image compilation with repeated acquisitions

Koller, Kristin; Rudrapatna, Umesh; Chamberland, Maxime; Raven, Erika P; Parker, Greg D; Tax, Chantal M W; Drakesmith, Mark; Fasano, Fabrizio; Owen, David; Hughes, Garin; Charron, Cyril; Evans, C John; Jones, Derek K
We provide a rich multi-contrast microstructural MRI dataset acquired on an ultra-strong gradient 3T Connectom MRI scanner comprising 5 repeated sets of MRI microstructural contrasts in 6 healthy human participants. The availability of data sets that support comprehensive simultaneous assessment of test-retest reliability of multiple microstructural contrasts (i.e., those derived from advanced diffusion, multi-component relaxometry and quantitative magnetisation transfer MRI) in the same population is extremely limited. This unique dataset is offered to the imaging community as a test-bed resource for conducting specialised analyses that may assist and inform their current and future research. The Microstructural Image Compilation with Repeated Acquisitions (MICRA) dataset includes raw data and computed microstructure maps derived from multi-shell and multi-direction encoded diffusion, multi-component relaxometry and quantitative magnetisation transfer acquisition protocols. Our data demonstrate high reproducibility of several microstructural MRI measures across scan sessions as shown by intra-class correlation coefficients and coefficients of variation. To illustrate a potential use of the MICRA dataset, we computed sample sizes required to provide sufficient statistical power a priori across different white matter pathways and microstructure measures for different statistical comparisons. We also demonstrate whole brain white matter voxel-wise repeatability in several microstructural maps. The MICRA dataset will be of benefit to researchers wishing to conduct similar reliability tests, power estimations or to evaluate the robustness of their own analysis pipelines.
PMCID:7779421
PMID: 33045335
ISSN: 1095-9572
CID: 5499232

Mean Diffusivity in Striatum Correlates With Acute Neuronal Death but Not Lesser Neuronal Injury in a Pilot Study of Neonatal Piglets With Encephalopathy

Lee, Jennifer K; Liu, Dapeng; Raven, Erika P; Jiang, Dengrong; Liu, Peiying; Qin, Qin; Kulikowicz, Ewa; Santos, Polan T; Adams, Shawn; Zhang, Jiangyang; Koehler, Raymond C; Martin, Lee J; Tekes, Aylin
BACKGROUND:Diffusion MRI is routinely used to evaluate brain injury in neonatal encephalopathy. Although abnormal mean diffusivity (MD) is often attributed to cytotoxic edema, the specific contribution from neuronal pathology is unclear. PURPOSE:To determine whether MD from high-resolution diffusion tensor imaging (DTI) can detect variable degrees of neuronal degeneration and pathology in piglets with brain injury induced by excitotoxicity or global hypoxia-ischemia (HI) with or without overt infarction. STUDY TYPE:Prospective. ANIMAL MODEL:Excitotoxic brain injury was induced in six neonatal piglets by intrastriatal stereotaxic injection of the glutamate receptor agonist quinolinic acid (QA). Three piglets underwent global HI or a sham procedure. Piglets recovered for 20-96 hours before undergoing MRI (n = 9). FIELD STRENGTH/SEQUENCE:-weighted imaging. ASSESSMENT:injury were assessed in the putamen and caudate. The cell bodies of normal neurons, degenerating neurons (excitotoxic necrosis, ischemic necrosis, or necrosis-apoptosis cell death continuum), and injured neurons with equivocal degeneration were counted by histopathology. STATISTICAL TESTS:injury and neuron counts were evaluated by descriptive analysis. RESULTS:-weighted MRI. DATA CONCLUSION:MD is more accurate than FA for detecting neuronal degeneration and loss during acute recovery from neonatal excitotoxic and HI brain injury. MD does not reliably detect nonfulminant, nascent, and potentially reversible neuronal injury. EVIDENCE LEVEL:1 TECHNICAL EFFICACY: Stage 2 J. Magn. Reson. Imaging 2020;52:1216-1226.
PMCID:7492395
PMID: 32396711
ISSN: 1522-2586
CID: 5499222

Impact of b-value on estimates of apparent fibre density

Genc, Sila; Tax, Chantal M W; Raven, Erika P; Chamberland, Maxime; Parker, Greg D; Jones, Derek K
Recent advances in diffusion magnetic resonance imaging (dMRI) analysis techniques have improved our understanding of fibre-specific variations in white matter microstructure. Increasingly, studies are adopting multi-shell dMRI acquisitions to improve the robustness of dMRI-based inferences. However, the impact of b-value choice on the estimation of dMRI measures such as apparent fibre density (AFD) derived from spherical deconvolution is not known. Here, we investigate the impact of b-value sampling scheme on estimates of AFD. First, we performed simulations to assess the correspondence between AFD and simulated intra-axonal signal fraction across multiple b-value sampling schemes. We then studied the impact of sampling scheme on the relationship between AFD and age in a developmental population (n = 78) aged 8-18 (mean = 12.4, SD = 2.9 years) using hierarchical clustering and whole brain fixel-based analyses. Multi-shell dMRI data were collected at 3.0T using ultra-strong gradients (300 mT/m), using 6 diffusion-weighted shells ranging from b = 0 to 6,000 s/mm2 . Simulations revealed that the correspondence between estimated AFD and simulated intra-axonal signal fraction was improved with high b-value shells due to increased suppression of the extra-axonal signal. These results were supported by in vivo data, as sensitivity to developmental age-relationships was improved with increasing b-value (b = 6,000 s/mm2 , median R2 = .34; b = 4,000 s/mm2 , median R2 = .29; b = 2,400 s/mm2 , median R2 = .21; b = 1,200 s/mm2 , median R2 = .17) in a tract-specific fashion. Overall, estimates of AFD and age-related microstructural development were better characterised at high diffusion-weightings due to improved correspondence with intra-axonal properties.
PMCID:7294071
PMID: 32216121
ISSN: 1097-0193
CID: 5499212