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A Tool to Integrate Electrophysiological Mapping for Cardiac Radioablation of Ventricular Tachycardia

Wang, Hesheng; Barbhaiya, Chirag R; Yuan, Ye; Barbee, David; Chen, Ting; Axel, Leon; Chinitz, Larry A; Evans, Andrew J; Byun, David J
PURPOSE/UNASSIGNED:Cardiac radioablation is an emerging therapy for recurrent ventricular tachycardia. Electrophysiology (EP) data, including electroanatomic maps (EAM) and electrocardiographic imaging (ECGI), provide crucial information for defining the arrhythmogenic target volume. The absence of standardized workflows and software tools to integrate the EP maps into a radiation planning system limits their use. This study developed a comprehensive software tool to enable efficient utilization of the mapping for cardiac radioablation treatment planning. METHODS AND MATERIALS/UNASSIGNED:After the scar area is outlined on the mapping surface, the tool extracts and extends the annotated patch into a closed surface and converts it into a structure set associated with the anatomic images. The tool then exports the structure set and the images as The Digital Imaging and Communications in Medicine Standard in Radiotherapy for a radiation treatment planning system to import. Overlapping the scar structure on simulation CT, a transmural target volume is delineated for treatment planning. RESULTS/UNASSIGNED:The tool has been used to transfer Ensite NavX EAM data into the Varian Eclipse treatment planning system in radioablation on 2 patients with ventricular tachycardia. The ECGI data from CardioInsight was retrospectively evaluated using the tool to derive the target volume for a patient with left ventricular assist device, showing volumetric matching with the clinically used target with a Dice coefficient of 0.71. CONCLUSIONS/UNASSIGNED:HeaRTmap smoothly fuses EP information from different mapping systems with simulation CT for accurate definition of radiation target volume. The efficient integration of EP data into treatment planning potentially facilitates the study and adoption of the technique.
PMCID:10320498
PMID: 37415904
ISSN: 2452-1094
CID: 5539402

Pulmonary Toxic Effects After Myeloablative Conditioning With Total Body Irradiation Delivered via Volumetric Modulated Arc Therapy With Fludarabine

Modrek, Aram S; Karp, Jerome M; Byun, David; Gerber, Naamit K; Abdul-Hay, Maher; Al-Homsi, Ahmad Samer; Galavis, Paulina; Teruel, Jose; Yuan, Ye
We present the case of a 56-year-old female with a diagnosis of acute T-cell lymphoblastic leukemia who received myeloablative conditioning for bone marrow transplant with total body irradiation (TBI) using volumetric modulated arc therapy (VMAT) to the upper body and anterior-posterior/posterior-anterior (AP/PA) open fields to the lower body followed by hematopoietic stem cell transplant. Her clinical course was complicated by high-grade pulmonary toxic effects 55 days after treatment that resulted in death. We discuss the case, planning considerations by radiation oncologists and radiation physicists, and the multidisciplinary medical management of this patient.
PMID: 35598860
ISSN: 1879-8519
CID: 5275182

Automated Tumor Segmentation in Radiotherapy

Savjani, Ricky R; Lauria, Michael; Bose, Supratik; Deng, Jie; Yuan, Ye; Andrearczyk, Vincent
Autosegmentation of gross tumor volumes holds promise to decrease clinical demand and to provide consistency across clinicians and institutions for radiation treatment planning. Additionally, autosegmentation can enable imaging analyses such as radiomics to construct and deploy large studies with thousands of patients. Here, we review modern results that utilize deep learning approaches to segment tumors in 5 major clinical sites: brain, head and neck, thorax, abdomen, and pelvis. We focus on approaches that inch closer to clinical adoption, highlighting winning entries in international competitions, unique network architectures, and novel ways of overcoming specific challenges. We also broadly discuss the future of gross tumor volumes autosegmentation and the remaining barriers that must be overcome before widespread replacement or augmentation of manual contouring.
PMID: 36202435
ISSN: 1532-9461
CID: 5387362

Development of a Big Data Radiation Oncology Dashboard

Yuan, Y; Winner, M; Chandras, R; Barbee, D; Xiao, J; Barton, S M; Schiff, P B; Sulman, E P
PURPOSE/OBJECTIVE(S): Healthcare data often exist in silos and in unstructured formats that limit interoperability and require tedious manual extraction. Our institution has adopted a flexible and scalable big data platform built on Hadoop that integrates data from Epic/Clarity as well as Aria and allows users to leverage modern data science tools to facilitate access. We hypothesize that a data analytics and visualization dashboard can be built using open-source tools that will (1) allow non-technical users to explore de-identified clinical data within our institutional big data platform and (2) connect with repositories of molecular data to demonstrate potential methods of integrating clinical and basic science data. MATERIALS/METHODS: De-identified patient-level radiation oncology data from the institutional big data platform (Hadoop) were extracted with the python packages pyodbc and pandas. For the purposes of this dashboard, radiation oncology specific clinical data elements were queried including the date of first radiation treatment, treatment location, treatment modality (SBRT, external beam, SRS, TBI, LDR/HDR brachytherapy), ICD10 codes, anatomic treatment site, number of fractions, treatment prescription, and dose per fraction. A python client connection with the publicly accessible instance of cBioPortal for Cancer Genomics was established using the Bravado library. Data transformation and cleaning was performed in python using panda's data frames. A web-based dashboard to facilitate user-defined visualizations was implemented using the Dash python library and interactive visualizations of subsets of extracted data were generated in real-time using the plotly plotting library.
RESULT(S): We developed a web-based dashboard that gives users without extensive programming expertise the ability to explore de-identified clinical data extracted from Hadoop. As proof of principle, the dashboard was used to visualize the clinical impact of the COVID-19 pandemic on radiation oncology patient volumes, revealing a significant decline in new radiation treatments in April and May of 2020 (-54% and -36% compared to 2019) during the initial COVID-19 surge. Furthermore, the dashboard allows users to interact with the cBioPortal for Cancer Genomics repository, which currently houses clinical and molecular data from 301 publicly available studies spanning 869 different cancer types. This interface with cBioPortal illustrates the potential for future integration of clinically meaningful sequencing results with clinical outcomes data.
CONCLUSION(S): We built an interactive web-based dashboard to enable general users' easy access to de-identified clinical data stored within the institutional big data platform. Additional data sources, including external molecular data can be connected to the dashboard allowing for future integration.
Copyright
EMBASE:636625718
ISSN: 1879-355x
CID: 5081992

Image Guided Volumetrically Modulated Total Body Irradiation (TBI): Progress on Single Institution Phase 2 Clinical Trial

Teruel, J R; Galavis, P; McCarthy, A; Taneja, S; Malin, M; Hitchen, C; Yuan, Y; Barbee, D; Gerber, N K
PURPOSE/OBJECTIVE(S): TBI is a backbone of many conditioning regimens for hematopoietic stem cell transplants but can lead to both acute and late toxicity including radiation-induced interstitial pneumonitis. The incidence of idiopathic pneumonia syndrome (IPS) after TBI-based myeloablative conditioning regimens ranges from 7% to 35%. The purpose of this study is to implement image guided volumetrically modulated technique (VMAT) for TBI with the goal of lung sparing and improved target coverage. MATERIALS/METHODS: Nine patients have been treated using image-guided VMAT based TBI at our institution as part of a single-arm phase 2 clinical trial for patients undergoing myeloablative conditioning regimens. The trial was approved by our internal review board (IRB) in September 2020 and aims to accrue 15 patients within one year. All patients enrolled in the trial have signed informed consent. The primary endpoints of the study are the following dosimetric constraints: V100% >= 90%, D98% >= 85% of Rx dose for the planning target volume (PTV), and a mean lung dose < 9 Gy. PTV is defined as the body contour cropped 5 mm from the surface and excluding lungs and kidneys but extended 3 mm into these organs. Additional secondary dosimetric endpoints include mean dose to each individual kidney < 11 Gy, and maximum dose to 2cc of the entire body < 130% of Rx dose. Clinical endpoints include the occurrence of IPS in the first 100 days after transplant, occurrence of acute graft versus host disease (GVHD), transplant related mortality or mortality in the first 100 days following transplant.
RESULT(S): Patients were treated to 12 Gy in 8 BID fractions (n=6) or 13.2 Gy in 8 BID fractions (n=3) over four consecutive days. All patients were able to complete treatment to the prescribed dose as planned. All patient plans met dosimetric constraints of the study. The median PTV V100% was 93.2% of Rx dose (Max: 95.6%, Min: 92.1%), the median PTV D98% was 90.2% of Rx dose (Max: 94.3%, Min: 88.3%), and the median lung dose mean was 7.63 Gy (Max: 7.94 Gy, Min: 7.29 Gy). In addition, individual kidney mean doses were < 11 Gy, and body maximum dose (D2cc) was < 130% of Rx dose for all patients. At this time, only one patient (12 Gy treatment) has reached the 100 day post-transplant follow-up with the following findings: no relapse on bone marrow biopsy, no pneumonitis, resolved acute GVHD overall grade 1 (skin: 1, GI: 0, Liver: 0), resolved dermatitis (grade 1), resolved vomiting (grade 2), ongoing diarrhea and nausea (grade 1, previously grade 2).
CONCLUSION(S): Our initial results indicate that primary and secondary dosimetric endpoints were achievable for all protocol patients treated thus far. As the trial progresses, secondary clinical endpoints at 100 day follow-up will be analyzed to evaluate occurrence of IPS, survival, and treatment related toxicities.
Copyright
EMBASE:636625880
ISSN: 1879-355x
CID: 5082192

Nyu clinical experience with total body irradiation: From 3d laterals to image-guided VMAT [Meeting Abstract]

Galavis, P; Hitchen, C; Mccarthy, A; Malin, M; Taneja, S; Ayyalasomayajula, S; Yuan, Y; Gerber, N; Barbee, D; Teruel, J
Purpose: Patients receiving myeloablative total body irradiation (TBI) doses >= 12Gy are at risk of developing interstitial pneumonitis. At our institution, TBI transitioned from extended distance opposed Laterals to image-guided VMAT, in an effort to improve coverage while sparing lungs and kidneys. This work presents a dosimetric comparison between 3D Laterals and VMAT.
Method(s): Nine patients were treated with VMAT as part of an ongoing phase II single-arm clinical trial. VMAT patients were CT-simulated supine, with thermoplastic masks for head/neck, chest/abdomen/pelvis and feet. VMAT planning (12Gy (n=6) or 13.2Gy (n=3) in 8-BID fractions) utilizes 6MV multi-isocentric arcs and AP/PA beams to treat the upper and lower body, respectively. Ten 3D Lateral patients were CT-simulated supine with arms positioned/immobilized for lung shielding, with rice compensation between legs/feet. Laterals plan (12Gy in 8-BID fractions) uses 15MV, beam spoiler, head compensation, and subfields to maintain coverage and mean-lungs dose <10.5Gy. Target (Body-5mm, extending 3mm into lungs and kidneys for VMAT; Body-2cm for Laterals) coverage was evaluated at V100%, and D98% (percentage of Rx). Absolute dose to lungs and kidneys were reportedResults: Median Target V100% and D98% for VMAT was 93.2% (Range: 95.6% to 92.1%) and 90.2% (94.3% to 88.3%), whereas for Laterals V100% and D98% was 57.3% (66.5% to 46.3%) and 80.6% (75.5% to 84%). The median Lung mean dose was 7.6Gy (7.3Gy to 7.9Gy) for VMAT. The median mean dose to kidney was 10.4Gy (10.1Gy to 10.7Gy) for VMAT, and 12.5Gy (11.9Gy to 13.5Gy) for Laterals.
Conclusion(s): We have established a VMAT-TBI program for patients requiring myeloablative irradiation. Improvement in target coverage is demonstrated by V100% and D98%, while reducing the mean dose to the lungs significantly from 10.5Gy to 8Gy
EMBASE:635748271
ISSN: 0094-2405
CID: 4987632

Investigation into the relationship patient setup accuracy and in-vivo transit dosimetry for image-guided volumetrically modulated total body irradiation (TBI) [Meeting Abstract]

Taneja, S; Teruel, J; Malin, M; Galavis, P; Mccarthy, A; Ayyalasomayajula, S; Hitchen, C; Gerber, N; Yuan, Y; Barbee, D
Purpose: In-vivo dosimetry for conventional total body irradiation (TBI) utilize point detectors placed along the patient surface to confirm the delivered dose matches prescription dose. However, in the volumetrically modulated arc therapy (VMAT) approach to TBI, the electronic portal imager device (EPID) can be utilized to acquire a 2-dimensional transmission fluence plane. This work explores the relationship between patient setup accuracy with transit in-vivo dosimetry.
Method(s): A total of 192 fields were investigated. Each VMAT plan consisted of four isocenters: head, chest, abdomen, and pelvis. Prior to treatment, the patient was imaged at the head, pelvis, and chest. Optimal couch shifts were determined for each isocenter under image guidance. The optimal IGRT shifts were determined using an inhouse application that minimized dose deviation using criteria established through plan uncertainty analysis performed in Eclipse. Translational couch residuals were recorded and defined as the difference in the global shift calculated and the optimal couch position with shifts. Transit dosimetry was measured per arc, and analyzed using SNC PerFRACTION with a gamma criteria of 10%/5mm, 5%/5mm, and 5%/7mm.
Result(s): Based on plan uncertainty analysis, clinical threshold for couch residuals were set to 7 mm (5 mm for chest isocenter) as there would be minimal impact on target coverage and organ sparing at those levels. Transit dosimetry showed that the average pass rate across all fields was 99.6%, 97.0%, and 99.2% for 10%/5mm, 5%/5mm, and 5%/7mm gamma criteria, respectively. Pearson correlation tests showed that there was weak correlation between gamma criteria and couch residuals. At stringent 3%/5mm gamma criteria, moderate correlation was found between lateral couch residuals for the head and chest and the head and chest arc analysis.
Conclusion(s): Transit dosimetry showed high pass rates using our couch residual tolerances, which confirmed the plan uncertainty analysis performed during treatment planning
EMBASE:635748254
ISSN: 0094-2405
CID: 4987642

Prostate-specific antigen kinetics and biochemical control following stereotactic body radiation therapy, high dose rate brachytherapy, and low dose rate brachytherapy: A multi-institutional analysis of 3502 patients

Levin-Epstein, Rebecca; Cook, Ryan R; Wong, J Karen; Stock, Richard G; Jeffrey Demanes, D; Collins, Sean P; Aghdam, Nima; Suy, Simeng; Mantz, Constantine; Katz, Alan J; Nickols, Nicholas G; Miszczyk, Leszek; Napieralska, Aleksandra; Namysl-Kaletka, Agnieszka; Prionas, Nicholas D; Bagshaw, Hilary; Buyyounouski, Mark K; Cao, Minsong; Mahal, Brandon A; Shabsovich, David; Dang, Audrey; Yuan, Ye; Rettig, Matthew B; Chang, Albert J; Jackson, William C; Spratt, Daniel E; Lehrer, Eric J; Zaorsky, Nicholas G; Kupelian, Patrick A; Steinberg, Michael L; Horwitz, Eric M; Jiang, Naomi Y; Kishan, Amar U
BACKGROUND AND PURPOSE/OBJECTIVE:Stereotactic body radiation therapy (SBRT), low dose rate brachytherapy (LDR-BT) and high dose rate brachytherapy (HDR-BT) are ablative-intent radiotherapy options for prostate cancer (PCa). These vary considerably in dose delivery, which may impact post-treatment prostate-specific antigen (PSA) patterns and biochemical control. We compared PSA kinetics between SBRT, HDR-BT, and LDR-BT, and assessed their relationships to biochemical recurrence-free survival (BCRFS). METHODS AND MATERIALS/METHODS:Retrospective PSA data were analyzed for 3502 men with low-risk (n = 2223; 63.5%), favorable intermediate-risk (n = 869; 24.8%), and unfavorable intermediate-risk (n = 410; 11.7%) PCa treated with SBRT (n = 1716; 49.0%), HDR-BT (n = 512; 14.6%), or LDR-BT (n = 1274; 36.4%) without upfront androgen deprivation therapy at 10 institutions from 1990 to 2017. We compared nadir PSA (nPSA), time to nPSA, achievement of nPSA <0.2 ng/mL and <0.5 ng/mL, rates of nPSA <0.4 ng/mL at 4 years, and BCRFS. RESULTS:Median follow-up was 72 months. Median nPSA and nPSA <0.2 ng/mL were stratified by risk group (interaction p ≤ 0.001). Median nPSA and time to nPSA were 0.2 ng/mL at 44 months after SBRT, 0.1-0.2 ng/mL at 37 months after HDR-BT, and 0.01-0.2 ng/mL at 51 months after LDR-BT (mean log nPSA p ≤ 0.009 for LDR-BT vs. SBRT or HDR-BT for low/favorable intermediate-risk). There were no differences in nPSA <0.4 ng/mL at 4 years (p ≥ 0.51). BCRFS was similar for all three modalities (p ≥ 0.27). Continued PSA decay beyond 4 years was predictive of durable biochemical control. CONCLUSION/CONCLUSIONS:LDR-BT led to lower nPSAs with longer continued decay compared to SBRT and HDR-BT, but no differences in BCRFS.
PMID: 32663537
ISSN: 1879-0887
CID: 4551102

Low-Dose-Rate Brachytherapy Boosting Concurrent Chemoradiation as a Definitive Treatment Modality for Cervical Cancer: Long-term Clinical Results of Outcomes and Associated Toxicity

Refaat, Tamer; Donnelly, Eric D; Gentile, Michelle; Novak, Caroline; Yuan, Ye; Khedr, Gehan A; Helenowksi, Irene; Lurain, John; Schink, Julian; Rademaker, Alfred; Sathiaseelan, Vythialinga; Strauss, Jonathan B; Small, William
PURPOSE/OBJECTIVE:To review and report the long-term treatment-induced adverse events (AEs) and outcomes of concomitant chemoradiotherapy boosted by low-dose-rate (LDR) conventional brachytherapy (BT) planning in patients with locoregionally advanced cervical cancer. PATIENTS AND METHODS/METHODS:After obtaining institutional review board approval, we reviewed the records of patients with stage IB1 to IVA, intact cervical cancer who were treated at our institution between 1983 and 2009. Eligible patients underwent definitive radiotherapy with external-beam radiation concomitant with cisplatin-based chemotherapy and boosted by LDR BT. Patient, tumor, and treatment characteristics; treatment-induced AEs, namely, gastrointestinal and genitourinary toxicities, as well as treatment outcomes; locoregional control (LRC), distant control (DC), progression-free survival (PFS), and overall survival (OS) were reviewed and reported. RESULTS:The study included 129 eligible cervical cancer patients; the median age was 46 years (mean, 47 ± 11 y; range, 28 to 81 y), consisting of stages I, II, III, and IV (29.5%, 48.1%, 17.8%, and 4.6%, respectively). The median follow-up was 37 months (mean, 58 ± 59 mo; range, 3 to 275 mo). The 3-year OS, PFS, LRC, and DC were 75.9%, 71.6%, 84.7%, and 80.2%, respectively. The 5-year OS, PFS, LRC, and DC were 70.7%, 68.7%, 84.7%, and 78.3%, respectively. The 10-year OS, PFS, LRC, and DC were 68.7%, 62.3%, 82.5%, and 73.2%, respectively. Gastrointestinal and genitourinary grade 3 and 4 acute AEs were reported in 3.9% and 0%, and chronic grade 3 and 4 AEs were reported in 20.9% and 12.4% of all patients, respectively. CONCLUSIONS:Definitive chemoradiotherapy followed by conventional LDR BT boost is effective, feasible, and tolerable treatment modality for cervical cancer. A comparison with MRI image-guided BT shows comparable treatment outcomes with superior OS in favor of LDR BT but inferior LC with a relatively worse toxicity profile.
PMID: 24487420
ISSN: 1537-453x
CID: 4452452

The Bionanoprobe: Synchrotron-based Hard X-ray Fluorescence Microscopy for 2D/3D Trace Element Mapping

Chen, Si; Paunesku, Tatjana; Yuan, Ye; Jin, Qiaoling; Hornberger, Benjamin; Flachenecker, Claus; Lai, Barry; Brister, Keith; Jacobsen, Chris; Woloschak, Gayle; Vogt, Stefan
PMCID:4938013
PMID: 27398077
ISSN: 1551-9295
CID: 4452472