Faculty Bibliography

Background: Application of Social Network Analysis (SNA) to acoustic telemetry is a useful approach to examine social behavior in fish. Atlantic Sturgeon (Acipenser oxyrinchus oxyrinchus) are ancient, long-lived anadromous finfish. Although Atlantic Sturgeon have been the subject of numerous telemetry studies, none have used SNA to analyze their co-occurrence behavior. During 2010-2014 Atlantic Sturgeon (n = 103) that were later genetically identified as being from the Saint John River, Canada and the Kennebec River, US were captured by otter trawl and brush weir in Minas Basin, Bay of Fundy, Canada, and acoustically tagged. Using data from moored acoustic receivers within foraging habitat in Minas Basin, we tested if Atlantic Sturgeon formed social associations that were random or structured during 2012 to 2014; and whether these co-occurrences consisted of individuals from the same river of origin or capture date. Results: Irrespective of genetic origin and initial capture date, Atlantic Sturgeon formed co-occurrences in Minas Basin that were significantly different than would be observed by chance during 2012 and very close to significant during 2013. Analysis demonstrated that some Atlantic Sturgeon preferentially co-occur within their primary feeding habitat. Conclusions: The current threats to Atlantic Sturgeon aggregations within the Bay of Fundy, Nova Scotia, include bycatch in fisheries throughout their coastal migration routes and more recently the development of tidal turbines along their migratory corridor to their summer aggregation site. It is important to determine if Atlantic Sturgeon form aggregations with conspecifics from the same population to inform management decisions regarding threats to groups of individuals. This study indicated that Atlantic Sturgeon may form preferential co-occurrences within their feeding aggregation and co-occurrences that were identified were not dependent upon population of origin or initial capture date.

The Atlantic Sturgeon Acipenser oxyrinchus oxyrinchus is an anadromous species that historically has been found along the Atlantic coast of North America from maritime Canada to the St. Johns River, Florida. Decades of overharvest and habitat loss has resulted in range-wide population declines, and in 2012 the species was listed under the U.S. Endangered Species Act as five Distinct Population Segments (DPSs). The extirpation of several populations, including some in the South Atlantic DPS, was identified as an important consideration in the final determination to list this DPS as endangered. In the St. Marys River, Georgia, the second-most southern river within their historical range, Atlantic Sturgeon were thought to have been extirpated for several decades. The objectives of this study were to document the seasonal occurrence of Atlantic Sturgeon in the St. Marys River and to document any evidence of an extant population in the river. During the summers of 2013-2016, we set 533 nets and captured a total of 25 Atlantic Sturgeon, including several age-1, river-resident juveniles. Genetic analyses indicated that these juveniles were descendants of a remnant population that is distinct but more closely related to other populations within the South Atlantic DPS than those in more northern rivers. Using acoustic telemetry, we monitored the movements and habitat use of 14 individual sturgeon in the St. Marys River estuary. Acoustically tagged juveniles resided mainly within the St. Marys River main stem, but we did detect a number of adult migrants using Cumberland Sound on a seasonal basis. Our results indicate that Atlantic Sturgeon persist in the St. Marys River and that the estuary also provides seasonally important habitat for migrating adults from other populations.

Sturgeon species are imperiled world-wide by a variety of anthropogenic stressors including chemical contaminants. Atlantic sturgeon, Acipenser oxyrinchus, and shortnose sturgeon, Acipenser brevirostrum, are largely sympatric acipenserids whose young life-stages are often exposed to high levels of benthic-borne PCBs and PCDD/Fs in large estuaries along the Atlantic Coast of North America. In previous laboratory studies, we demonstrated that both sturgeon species are sensitive to early life-stage toxicities from exposure to environmentally relevant concentrations of coplanar PCBs and TCDD. The sensitivity of young life-stages of fishes to these contaminants varies among species by three orders of magnitude and often is due to variation in the structure and function of the aryl hydrocarbon receptor (AHR) pathway. Unlike mammals, fishes have two forms of AHR (AHR1 and AHR2) with AHR2 usually being more highly expressed across tissues and functional in mediating toxicities. Based on previous studies in white sturgeon, A. transmontanus, we hypothesized that sturgeon taxa are unusually sensitive to these contaminants because of higher levels of expression and functional activity of AHR1 than in other fish taxa. To address this possibility, we characterized AHR1 in both Atlantic Coast sturgeon species, evaluated its' in vivo expression in young life-stages and in multiple tissues of shortnose sturgeon, and tested its ability to drive reporter gene expression in AHR-deficient cells treated with graded doses of PCB126 and TCDD. Similar to white sturgeon and lake sturgeon, AHR1 amino acid sequences in Atlantic sturgeon and shortnose sturgeon were more similar to mammalian AHRs and avian AHR1s than to AHR1 in other fishes, suggesting their greater functionality in sturgeon species than in other fishes. Exposure to graded doses of coplanar PCBs and TCDD usually failed to significantly induce AHR1 expression in young life-stages or most tissues of shortnose sturgeon. However, in reporter gene assays, AHR1 drove higher levels of gene expression than AHR2 alone, but their binary combination failed to drive higher levels of expression than either AHR alone. In total, our results suggest that AHR1 may be more functional in sturgeon species than in other fishes, but probably does not explain their heightened sensitivity to these contaminants.

Atlantic sturgeon and shortnose sturgeon co-occur in many estuaries along the Atlantic Coast of North America. Both species are protected under the U.S. Endangered Species Act and internationally on the IUCN Red list and by CITES. Early life-stages of both sturgeons may be exposed to persistent aromatic hydrocarbon contaminants such as PCBs and PCDD/Fs which are at high levels in the sediments of impacted spawning rivers. Our objective was to compare the PCBs and TCDD sensitivities of both species with those of other fishes and to determine if environmental concentrations of these contaminants approach those that induce toxicity to their young life-stages under controlled laboratory conditions. Because our previous studies suggested that young life-stages of North American sturgeons are among the more sensitive of fishes to coplanar PCB and TCDD-induced toxicities, we were interested in identifying the molecular bases of this vulnerability. It is known that activation of the aryl hydrocarbon receptor 2 (AHR2) in fishes mediates most toxicities to these contaminants and transcriptional activation of xenobiotic metabolizing enzymes such as cytochrome P4501A (CYP1A). Previous studies demonstrated that structural and functional variations in AHRs are the bases for differing sensitivities of several vertebrate taxa to aromatic hydrocarbons. Therefore, in this study we characterized AHR2 and its expression in both sturgeons as an initial step in understanding the mechanistic bases of their sensitivities to these contaminants. We also used CYP1A expression as an endpoint to develop Toxicity Equivalency Factors (TEFs) for these sturgeons. We found that critical amino acid residues in the ligand binding domain of AHR2 in both sturgeons were identical to those of the aromatic hydrocarbon-sensitive white sturgeon, and differed from the less sensitive lake sturgeon. AHR2 expression was induced by TCDD (up to 6-fold) and by three of four tested coplanar PCB congeners (3-5-fold) in Atlantic sturgeon, but less so in shortnose sturgeon. We found that expression of AHR2 and CYP1A mRNA significantly covaried after exposure to TCDD and PCB77, PCB81, PCB126, but not PCB169 in both sturgeons. We also determined TEFs for the four coplanar PCBs in shortnose sturgeon based on comparison of CYP1A mRNA expression across all doses. Surprisingly, the TEFs for all four coplanar PCBs in shortnose sturgeon were much higher (6.4-162 times) than previously adopted for fishes by the WHO.

Atlantic sturgeon Acipenser oxyrinchus surfacing behaviour was investigated in Minas Basin (45° 20' N; 64° 00' W) and the Bay of Fundy with pop-up satellite archival tags (MiniPAT) measuring physical variables (pressure, temperature, light). Of six tags deployed during June and July, five provided pop-up locations and two were recovered after c. 4 months. Analysis of recovered archival data revealed that the frequency of surfacing events was highest (78·9%) when A. oxyrinchus were in Minas Basin at depths <10 m. Surfacing frequency decreased substantially when fish migrated into greater depths of the Bay of Fundy (>40 m). The tidal cycle in Minas Basin had a significant relationship to surfacing frequency, with the most surfacing events (49·5%) occurring on the flood tide, from mid- to high-tide. Surfacing events ranged from 0-12 a day and the maximum number occurred between 2300 and 0300 hours. Maximum surfacing ascent speeds ranged from 0·50 to 4·17 m s^-1and maximum descent speeds ranged from 0·17 to 3·17 m s^-1. Buoyancy control, by gulping air to inflate the gas bladder, is proposed as the main reason for surfacing behaviour in A. oxyrinchus.

Atlantic tomcod in the Hudson River Estuary bioaccumulate high hepatic burdens of environmental toxicants. Previously, we demonstrated that Hudson River tomcod developed resistance to TCDD and PCB toxicity probably through strong natural selection during their early life-stages for a variant of the Aryl Hydrocarbon Receptor2 (AHR2). Here, we evaluated the genomic consequences of the resistant genotype by comparing global gene expression in larval tomcod from the Hudson River with expression in larvae from a nearby sensitive population (Shinnecock Bay). We developed an annotated draft tomcod genome to explore the effects of multigenerational exposure to toxicants and a functionally impaired AHR2 on the transcriptome. We used the tomcod genome as a reference in RNA-Seq to compare global gene expression in tomcod larvae from the Hudson River and Shinnecock Bay after experimental exposure of larvae to graded doses of TCDD. We found dramatic differences between offspring from the two populations in the number of genes that were differentially expressed at all doses (0.01, 0.1, and 1 ppb) and even in the vehicle controls. At the two lowest TCDD doses, 250 and 1,141 genes were differentially expressed in Shinnecock Bay larvae compared with 14 and 12, respectively, in Hudson River larvae. At the highest dose (1.0 ppb), 934 genes were differentially expressed in Shinnecock Bay larvae and 173 in Hudson River larvae, but only 28 (16%) of affected genes were shared among both populations. Given the large difference between the two populations in the number and identity of differentially expressed genes, it is likely that the AHR2 pathway interacts directly or indirectly with many genes beyond those known in the AHR2 battery and that other regulatory systems may also respond to TCDD exposure. The effects of chronic multi-generational exposure to environmental toxicants on the genome of Hudson River tomcod are much greater than previously expected.

Natural mortality of Atlantic sturgeon (Acipenser oxyrinchus) has been determined to be low (M = 0.07). Reported herein is the mortality by beach stranding of 11 Atlantic sturgeon in Scot's Bay, part of the inner Bay of Fundy in Nova Scotia, Canada on 22 June 2014. Genetic analyses, histological analysis and age determination were performed to determine origin, maturity stage and age of the stranded Atlantic sturgeon. Microsatellite and mitochondrial DNA analyses indicated that four of the Atlantic sturgeon (2 males and 2 females) were from the Saint John River, NB population, which was designated as threatened by the Committee on the Status of Endangered Wildlife in Canada. Seven Atlantic sturgeon (1 male, 5 females, 1 unknown) were from the Kennebec River, Maine population, that was listed as threatened under the Endangered Species Act in the U. S. Ageing of A. oxyrinchus by pectoral fin spine analysis determined that the mean age of the individuals from the Saint John River ( [Formula: see text] years, sd = 5.0) and the Kennebec River ( [Formula: see text] years, sd = 3.5) were not significantly different. This is the first report of a stranding event of Atlantic sturgeon, and describes a source of natural mortality affecting populations of concern in both Canada and the U. S.