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Measurable residual disease detection by high throughput sequencing improves risk stratification for pediatric B-ALL
Wood, Brent; Wu, David; Crossley, Beryl; Dai, Yunfeng; Williamson, David; Gawad, Charles; Borowitz, Michael J; Devidas, Meenakshi; Maloney, Kelly W; Larsen, Eric; Winick, Naomi; Raetz, Elizabeth; Carroll, William L; Hunger, Stephen P; Loh, Mignon; Robins, Harlan; Kirsch, Ilan
Early response to induction chemotherapy is an important prognostic factor in B lymphoblastic leukemia (B-ALL). Here, we compare high throughput sequencing (HTS) of IGH and TRG genes versus flow cytometry (FC) for measurable residual disease (MRD) detection at the end of induction chemotherapy in pediatric patients with newly diagnosed B-ALL. 619 paired pretreatment and end of induction bone marrow samples from Children's Oncology Group (COG) studies AALL0331 (clinicaltrials.gov NCT00103285) (standard-risk; SR with MRD by FC at any level) and AALL0232 (clinicaltrials.gov NCT00075725) (high-risk; HR with day 29 MRD <0.1% by FC) were evaluated by HTS and FC for Event-free (EFS) and Overall Survival (OS). HTS and FC showed similar 5-year EFS and OS for MRD positive and negative patients using an MRD threshold of 0.01%. However, there was a high discordant rate with HTS identifying 55 (38.7%) more patients MRD positive at this threshold. These discrepant patients have worse outcomes than FC MRD negative patients. Additionally, the increased analytic sensitivity of HTS permitted identification of 19.9% of SR patients without MRD at any detectable level who had excellent 5-year EFS (98.1%) and OS (100%). The higher analytic sensitivity and lower false negative rate of HTS improves upon FC for measurable residual disease detection in pediatric B lymphoblastic leukemia by identifying a novel subset of patients at end of induction who are essentially cured using current chemotherapy and identifying MRD at 0.01% in up to one-third of patients who are missed at the same threshold by FC.
PMCID:5865233
PMID: 29284596
ISSN: 1528-0020
CID: 2927182
Toxicity associated with intensive postinduction therapy incorporating clofarabine in the very high-risk stratum of patients with newly diagnosed high-risk B-lymphoblastic leukemia: A report from the Children's Oncology Group study AALL1131
Salzer, Wanda L; Burke, Michael J; Devidas, Meenakshi; Chen, Si; Gore, Lia; Larsen, Eric C; Borowitz, Michael; Wood, Brent; Heerema, Nyla A; Carroll, Andrew J; Hilden, Joanne M; Loh, Mignon L; Raetz, Elizabeth A; Winick, Naomi J; Carroll, William L; Hunger, Stephen P
BACKGROUND:Children, adolescents, and young adults with very high-risk (VHR) B acute lymphoblastic leukemia (B-ALL) have poor outcomes, and novel therapies are needed for this subgroup. The AALL1131 study evaluated postinduction therapy using cyclophosphamide (CPM), etoposide (ETOP), and clofarabine (CLOF) for patients with VHR B-ALL. METHODS:Patients who were 1 to 30 years old and had VHR B-ALL received modified Berlin-Frankfurt-Münster therapy after induction and were randomized to 1) CPM, cytarabine, mercaptopurine, vincristine (VCR), and pegaspargase (control arm), 2) CPM, ETOP, VCR, and pegaspargase (experimental arm 1), or 3) CPM, ETOP, CLOF (30 mg/m2 /d × 5), VCR, and pegaspargase (experimental arm 2) during the second half of consolidation and delayed intensification. RESULTS:The rates of grade 4/5 infections and grade 3/4 pancreatitis were significantly increased in experimental arm 2. The dose of CLOF was, therefore, reduced to 20 mg/m2 /d × 5, and myeloid growth factor was required after CLOF administration. Despite these changes, 4 of 39 patients (10.3%) developed grade 4 infections, with 1 of these patients developing a grade 5 acute kidney injury attributed to CLOF, whereas only 1 of 46 patients (2.2%) in experimental arm 1 developed grade 4 infections, and there were no grade 4/5 infections in the control arm (n = 20). Four patients in experimental arm 2 had prolonged cytopenias for >60 days, whereas none did in the control arm or experimental arm 1. Counts failed to recover for 2 of these patients, one having a grade 5 acute kidney injury and the other removed from protocol therapy; both events occurred 92 days after the start of consolidation part 2. CONCLUSIONS:In AALL1131, CLOF, administered with CPM and ETOP, was associated with unacceptable toxicity. Cancer 2017. © 2017 American Cancer Society.
PMCID:5839964
PMID: 29266189
ISSN: 1097-0142
CID: 2893992
Preclinical efficacy of daratumumab in T-cell acute lymphoblastic leukemia (T-ALL)
Bride, Karen L; Vincent, Tiffaney L; Im, Soo-Yeon; Aplenc, Richard; Barrett, David M; Carroll, William L; Carson, Robin; Dai, Yunfeng; Devidas, Meenakshi; Dunsmore, Kimberly P; Fuller, Tori; Glisovic-Aplenc, Tina; Horton, Terzah M; Hunger, Stephen P; Loh, Mignon L; Maude, Shannon L; Raetz, Elizabeth A; Winter, Stuart S; Grupp, Stephan A; Hermiston, Michelle L; Wood, Brent L; Teachey, David T
As a consequence of acquired or intrinsic disease resistance, the prognosis for patients with relapsed or refractory T-cell acute lymphoblastic leukemia (T-ALL) is dismal. Novel, less toxic drugs are clearly needed. One of the most promising emerging therapeutic strategies for cancer treatment is targeted immunotherapy. Immune therapies have improved outcomes for patients with other hematologic malignancies including B-ALL, however no immune therapy has been successfully developed for T-ALL. We hypothesize targeting CD38 will be effective against T-ALL. We demonstrate that blasts from patients with T-ALL have robust surface CD38 surface expression and that this expression remains stable after exposure to multi-agent chemotherapy. CD38 is expressed at very low levels on normal lymphoid and myeloid cells and on a few tissues of non-hematopoietic origin, suggesting that CD38 may be an ideal target. Daratumumab is a human IgG1κ monoclonal antibody that binds CD38, and has been demonstrated to be safe and effective in patients with refractory multiple myeloma (MM). We tested daratumumab in a large panel of T-ALL patient-derived xenografts (PDX) and found striking efficacy in 14 of 15 different PDX. These data suggest that daratumumab is a promising novel therapy for pediatric T-ALL patients.
PMCID:5833263
PMID: 29305553
ISSN: 1528-0020
CID: 2927142
Outcome of pediatric patients with acute lymphoblastic leukemia/lymphoblastic lymphoma with hypersensitivity to pegaspargase treated with PEGylated Erwinia asparaginase, pegcrisantaspase: A report from the Children's Oncology Group
Rau, Rachel E; Dreyer, ZoAnn; Choi, Mi Rim; Liang, Wei; Skowronski, Roman; Allamneni, Krishna P; Devidas, Meenakshi; Raetz, Elizabeth A; Adamson, Peter C; Blaney, Susan M; Loh, Mignon L; Hunger, Stephen P
BACKGROUND:Erwinia asparaginase is a Food and Drug Administration approved agent for the treatment of acute lymphoblastic leukemia (ALL) for patients who develop hypersensitivity to Escherichia coli derived asparaginases. Erwinia asparaginase is efficacious, but has a short half-life, requiring six doses to replace one dose of the most commonly used first-line asparaginase, pegaspargase, a polyethylene glycol (PEG) conjugated E. coli asparaginase. Pegcristantaspase, a recombinant PEGylated Erwinia asparaginase with improved pharmacokinetics, was developed for patients with hypersensitivity to pegaspargase. Here, we report a series of patients treated on a pediatric phase 2 trial of pegcrisantaspase. PROCEDURE/METHODS:Pediatric patients with ALL or lymphoblastic lymphoma and hypersensitivity to pegaspargase enrolled on Children's Oncology Group trial AALL1421 (Jazz 13-011) and received intravenous pegcrisantaspase. Serum asparaginase activity (SAA) was monitored before and after dosing; immunogenicity assays were performed for antiasparaginase and anti-PEG antibodies and complement activation was evaluated. RESULTS:Three of the four treated patients experienced hypersensitivity to pegcrisantaspase manifested as clinical hypersensitivity reactions or rapid clearance of SAA. Immunogenicity assays demonstrated the presence of anti-PEG immunoglobulin G antibodies in all three hypersensitive patients, indicating a PEG-mediated immune response. CONCLUSIONS:This small series of patients, nonetheless, provides data, suggesting preexisting immunogenicity against the PEG moiety of pegaspargase and poses the question as to whether PEGylation may be an effective strategy to optimize Erwinia asparaginase administration. Further study of larger cohorts is needed to determine the incidence of preexisting antibodies against PEG-mediated hypersensitivity to pegaspargase.
PMCID:5839116
PMID: 29090524
ISSN: 1545-5017
CID: 2927192
TP53 Germline Variations Influence the Predisposition and Prognosis of B-Cell Acute Lymphoblastic Leukemia in Children
Qian, Maoxiang; Cao, Xueyuan; Devidas, Meenakshi; Yang, Wenjian; Cheng, Cheng; Dai, Yunfeng; Carroll, Andrew; Heerema, Nyla A; Zhang, Hui; Moriyama, Takaya; Gastier-Foster, Julie M; Xu, Heng; Raetz, Elizabeth; Larsen, Eric; Winick, Naomi; Bowman, W Paul; Martin, Paul L; Mardis, Elaine R; Fulton, Robert; Zambetti, Gerard; Borowitz, Michael; Wood, Brent; Nichols, Kim E; Carroll, William L; Pui, Ching-Hon; Mullighan, Charles G; Evans, William E; Hunger, Stephen P; Relling, Mary V; Loh, Mignon L; Yang, Jun J
Purpose Germline TP53 variation is the genetic basis of Li-Fraumeni syndrome, a highly penetrant cancer predisposition condition. Recent reports of germline TP53 variants in childhood hypodiploid acute lymphoblastic leukemia (ALL) suggest that this type of leukemia is another manifestation of Li-Fraumeni syndrome; however, the pattern, prevalence, and clinical relevance of TP53 variants in childhood ALL remain unknown. Patients and Methods Targeted sequencing of TP53 coding regions was performed in 3,801 children from the Children's Oncology Group frontline ALL clinical trials, AALL0232 and P9900. TP53 variant pathogenicity was evaluated according to experimentally determined transcriptional activity, in silico prediction of damaging effects, and prevalence in non-ALL control populations. TP53 variants were analyzed for their association with ALL presenting features and treatment outcomes. Results We identified 49 unique nonsilent rare TP53 coding variants in 77 (2.0%) of 3,801 patients sequenced, of which 22 variants were classified as pathogenic. TP53 pathogenic variants were significantly over-represented in ALL compared with non-ALL controls (odds ratio, 5.2; P < .001). Children with TP53 pathogenic variants were significantly older at ALL diagnosis (median age, 15.5 years v 7.3 years; P < .001) and were more likely to have hypodiploid ALL (65.4% v 1.2%; P < .001). Carrying germline TP53 pathogenic variants was associated with inferior event-free survival and overall survival (hazard ratio, 4.2 and 3.9; P < .001 and .001, respectively). In particular, children with TP53 pathogenic variants were at a dramatically higher risk of second cancers than those without pathogenic variants, with 5-year cumulative incidence of 25.1% and 0.7% ( P < .001), respectively. Conclusion Loss-of-function germline TP53 variants predispose children to ALL and to adverse treatment outcomes with ALL therapy, particularly the risk of second malignant neoplasms.
PMCID:5815403
PMID: 29300620
ISSN: 1527-7755
CID: 2927152
Longitudinal analysis of quality of life outcomes in children during treatment for acute lymphoblastic leukemia: A report from the Children's Oncology Group AALL0932 trial
Zheng, Daniel J; Lu, Xiaomin; Schore, Reuven J; Balsamo, Lyn; Devidas, Meenakshi; Winick, Naomi J; Raetz, Elizabeth A; Loh, Mignon L; Carroll, William L; Sung, Lillian; Hunger, Stephen P; Angiolillo, Anne L; Kadan-Lottick, Nina S
BACKGROUND: Children with average-risk acute lymphoblastic leukemia (AR-ALL) face many challenges that can adversely affect their quality of life (QOL). However, to the authors' knowledge, patterns and predictors of QOL impairment during therapy have not been well characterized to date. METHODS: Patients with AR-ALL who were enrolled on the Children's Oncology Group AALL0932 trial were offered participation in this prospective cohort study if they were aged >/=4 years at the time of diagnosis and had an English-speaking parent. At approximately 2 months, 8 months, 17 months, 26 months, and 38 months (boys only) after diagnosis, parents completed the Pediatric Quality of Life Inventory Generic Core Scales Version 4.0 (PedsQL4.0) and McMaster Family Assessment Device instruments for QOL (physical, emotional, and social functioning) and family functioning, respectively. The proportions of individuals scoring in the impaired range (2 standard deviations below the population mean) were calculated at each time point. Longitudinal impairment patterns and predictors were examined. RESULTS: A total of 594 participants with AR-ALL were diagnosed at a mean age of 6.0 years (standard deviation, 1.6 years). At 2 months, a substantial proportion of participants had impaired scores for physical (36.5%; 95% confidence interval [95% CI], 32.3%-40.8%) and emotional (26.2%; 95% CI, 22.5%-30.2%) functioning compared with population norms of 2.3%. These elevations persisted at 26 months. Emotional impairment at 2 months (odds ratio, 3.4; 95% CI, 1.5-7.7) was found to significantly predict emotional impairment at 26 months. In repeated measures analysis with multivariate modeling, unhealthy family functioning (odds ratio, 1.5; 95% CI, 1.1-2.1) significantly predicted emotional impairment controlling for age and sex. QOL outcomes were similar between sexes at the end of therapy (26 months for girls and 38 months for boys). CONCLUSIONS: Many children with AR-ALL experience physical and emotional functioning impairment that begins early in treatment and persists. Early screening may identify high-risk patients who might benefit from family-based interventions. Cancer 2017. (c) 2017 American Cancer Society.
PMCID:5808870
PMID: 29112230
ISSN: 1097-0142
CID: 2773072
A novel AGGF1-PDGFRβ fusion in pediatric T-cell acute lymphoblastic leukemia
Zabriskie, Matthew S; Antelope, Orlando; Verma, Anupam R; Draper, Lauren R; Eide, Christopher A; Pomicter, Anthony D; Tran, Thai Hoa; Druker, Brian J; Tyner, Jeffrey W; Miles, Rodney R; Graham, James M; Hwang, Jae-Yeon; Varley, Katherine E; Toydemir, Reha M; Deininger, Michael W; Raetz, Elizabeth A; O'Hare, Thomas
PMCID:5792293
PMID: 29284681
ISSN: 1592-8721
CID: 2927172
The potential of precision medicine for childhood acute lymphoblastic leukemia: opportunities and challenges
Mallory, Nicole; Pierro, Joanna; Raetz, Elizabeth; Carroll, William L.
ISI:000453774800004
ISSN: 2380-8993
CID: 5202852
Reply to I.J. Cohen [Letter]
Hardy, Kristina K; Embry, Leanne M; Kairalla, John A; Helian, Shanjun; Devidas, Meenakshi; Armstrong, F Daniel; Hunger, Stephen; Carroll, William L; Larsen, Eric; Raetz, Elizabeth A; Loh, Mignon L; Yang, Wenjian; Relling, Mary V; Noll, Robert B; Winick, Naomi
PMID: 29045162
ISSN: 1527-7755
CID: 2927212
Klinefelter syndrome and 47,XYY syndrome in children with B cell acute lymphoblastic leukaemia [Letter]
Rau, Rachel E; Carroll, Andrew J; Heerema, Nyla A; Arland, Lesley; Carroll, William L; Winick, Naomi J; Raetz, Elizabeth A; Loh, Mignon L; Yang, Wenjian; Relling, Mary V; Dai, Yunfeng; Devidas, Meenakshi; Hunger, Stephen P
PMCID:5247399
PMID: 27434379
ISSN: 1365-2141
CID: 2185382