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Free-Breathing Volumetric Fat/Water Separation by Combining Radial Sampling, Compressed Sensing, and Parallel Imaging

Benkert, Thomas; Feng, Li; Sodickson, Daniel K; Chandarana, Hersh; Block, Kai Tobias
PURPOSE: Conventional fat/water separation techniques require that patients hold breath during abdominal acquisitions, which often fails and limits the achievable spatial resolution and anatomic coverage. This work presents a novel approach for free-breathing volumetric fat/water separation. METHODS: Multiecho data are acquired using a motion-robust radial stack-of-stars three-dimensional GRE sequence with bipolar readout. To obtain fat/water maps, a model-based reconstruction is used that accounts for the off-resonant blurring of fat and integrates both compressed sensing and parallel imaging. The approach additionally enables generation of respiration-resolved fat/water maps by detecting motion from k-space data and reconstructing different respiration states. Furthermore, an extension is described for dynamic contrast-enhanced fat-water-separated measurements. RESULTS: Uniform and robust fat/water separation is demonstrated in several clinical applications, including free-breathing noncontrast abdominal examination of adults and a pediatric subject with both motion-averaged and motion-resolved reconstructions, as well as in a noncontrast breast exam. Furthermore, dynamic contrast-enhanced fat/water imaging with high temporal resolution is demonstrated in the abdomen and breast. CONCLUSION: The described framework provides a viable approach for motion-robust fat/water separation and promises particular value for clinical applications that are currently limited by the breath-holding capacity or cooperation of patients. Magn Reson Med, 2016. (c) 2016 International Society for Magnetic Resonance in Medicine.
PMCID:5344788
PMID: 27612300
ISSN: 1522-2594
CID: 2238792

Multiparametric imaging of renal cancers [Meeting Abstract]

Chandarana, H
Small renal masses are increasingly diagnosed incidentally. This results in management dilemma because numbers of small renal masses are either benign tumours such as angiomyolipoma (AML) or oncocytoma, or are neoplasms with indolent behavior [1]. Surgical treatments although provide excellent oncologic control is associated with development and worsening of renal insufficiency and associated cardiovascular morbidity [2]. Therefore, ability to non-invasively investigate renal tumor histopathology and aggressiveness can guide treatment decision and lower treatment cost. Within this paradigm, the role of radiologist and imaging is evolving to predicting aggressiveness and biology of the tumor as well as providing operative guidance. MR imaging can play a very important role not only as a problem solving tool, but can provide deeper insight into tumour biology through techniques such as diffusion weighted imaging (DWI) and perfusion weighted imaging (PWI). Number of key observations highlighting the role of MR including advance imaging techniques in evaluation of renal masses is as listed below: 1. Differentiating benign renal masses from malignant tumour. - There is some controversy regarding the role of signal loss on opposed phase chemical shift imaging in discriminating AML from RCC [3,4]. - Lipid poor AML tend to have uniform low T2 signal, uniform enhancement without evidence for necrosis, and restricted diffusion [5,6]. - There is overlap in the morphologic features of Oncocytoma and RCC on conventional imaging [7, 8]. Pilot data suggests that DWI and PWI may have a role in discriminating these benign renal tumours. 2. Histologic subtyping R
EMBASE:615258447
ISSN: 1470-7330
CID: 2534002

Opportunities and challenges in imaging metastatic disease [Meeting Abstract]

Chandarana, H
Positron emission tomography (PET) and magnetic resonance (MR) imaging until recently has been performed by separate PET and MR devices with temporal delay between these two acquisitions. However, various recent hardware solutions have been developed by different vendors which permit simultaneous or near simultaneous PET and MR acquisition. However, the clinical translation of this modality for oncologic imaging requires not only identifying the appropriate clinical indications, but also understanding various components involved in establishing a PET/ MR service which include physical installation of the system, equipment safety, clinical workflow, technician and physician training, and monetary reimbursement. The current and potential clinical indications for imaging of metastatic disease can be broadly classified as follows: (1). Simultaneous local and distant staging of cancers such as rectal cancer and gynecologic malignancies. Here high spatial resolution of MRI provides information about local extent of the disease and PET is used predominantly for distant staging. (2). Problem solving for potential metastatic disease such as for small liver lesions, small lymph nodes, or bone marrow involvement. Additional information provided by MRI and PET can better characterize lesions and improve confidence in diagnosing presence or absence of metastatic disease. (3). Assessment of treatment response. Use of quantitative MR and PET information can potentially provide synergistic information in assessing treatment response. To address these clinical need there are number of operational considerations such as: (1). Protocol optimisation. (2). Workflow in scanning and interpretation of studies. Some of the technical challenges and limitations that need to be considered include: (1). Limitation of MRI for lung lesion detection. (2). Attenuation correction. (3). Registration of free-breathing PET and breath-hold thoacoabdominal MR data. While FDG PET/CT remains the workhorse for diagnosis and management of oncologic diseases, early experience shows that PET/MR may have a complementary role. PET/MR could potentially play a significant role in diagnosis and management algorithms of several malignancies
EMBASE:615258404
ISSN: 1470-7330
CID: 2534012

AN ANALYSIS OF THE EFFECT OF 3D PRINTED RENAL CANCER MODELS ON SURGICAL PLANNING [Meeting Abstract]

Rude, Temitope; Wake, Nicole; Sodickson, Daniel K; Borin, James; Stifelman, Michael; Chandarana, Hersh; Huang, William C
ISI:000375278600474
ISSN: 1527-3792
CID: 2509792

REPORTING STANDARDS OF INDETERMINATE RENAL MASSES ON CT AND MRI: A NATIONAL SURVEY OF UROLOGISTS AND RADIOLOGISTS BY THE SOCIETY OF ABDOMINAL RADIOLOGY RCC DISEASE-FOCUSED PANEL [Meeting Abstract]

Hu, Eric; Silverman, Stuart; Smith, Andrew; Chandarana, Hersh; Hafez, Khaled; Palapattu, Ganesh; Davenport, Matt
ISI:000375278600464
ISSN: 1527-3792
CID: 2509782

Optimal target VOI size for accurate 4D coregistration of DCE-MRI [Meeting Abstract]

Park, Brian; Mikheev, Artem; Wadghiri, Youssef Zaim; Bertrand, Anne; Novikov, Dmitry; Chandarana, Hersh; Rusinek, Henry
Dynamic contrast enhanced (DCE) MRI has emerged as a reliable and diagnostically useful functional imaging technique. DCE protocol typically lasts 3-15 minutes and results in a time series of N volumes. For automated analysis, it is important that volumes acquired at different times be spatially coregistered. We have recently introduced a novel 4D, or volume time series, coregistration tool based on a user-specified target volume of interest (VOI). However, the relationship between coregistration accuracy and target VOI size has not been investigated. In this study, coregistration accuracy was quantitatively measured using various sized target VOIs. Coregistration of 10 DCE-MRI mouse head image sets were performed with various sized VOIs targeting the mouse brain. Accuracy was quantified by measures based on the union and standard deviation of the coregistered volume time series. Coregistration accuracy was determined to improve rapidly as the size of the VOI increased and approached the approximate volume of the target (mouse brain). Further inflation of the VOI beyond the volume of the target (mouse brain) only marginally improved coregistration accuracy. The CPU time needed to accomplish coregistration is a linear function of N that varied gradually with VOI size. From the results of this study, we recommend the optimal size of the VOI to be slightly overinclusive, approximately by 5 voxels, of the target for computationally efficient and accurate coregistration.
ISI:000378223800056
ISSN: 0277-786x
CID: 2228152

An analysis of the effect of 3D printed renal cancer models on surgical planning [Meeting Abstract]

Rude, T; Wake, N; Sodickson, D K; Stifelman, M; Borin, J; Chandarana, H; Huang, W C
Purpose Pre-operative three-dimensional (3D) printed renal malignancy models are tools with potential benefits in surgical training and patient education [1,2]. Most importantly, 3D models may facilitate surgical planning by allowing surgeons to assess tumor complexity as well as the relationship of the tumor to major anatomic structures [3]. The objective of this study was to evaluate this impact. Methods Imaging was obtained from an IRB approved, prospectively collected database of multiparametric magnetic resonance imaging (MRI) of renal masses. Ten cases eligible for elective partial nephrectomy were retrospectively selected. High-fidelity models were 3D printed in multiple colors based on T1 images (Fig. 1). Cases were reviewed by three attending surgeons and six senior residents with imaging alone and in addition to the 3D model. A standardized questionnaire was developed to capture the planned surgical approach and intraoperative technique in both sessions. Results Surgical approach was changed in 20 % of decisions, intraoperative considerations were changed in 40 % (Fig. 2). Thirty percent and 23 % of decisions in the attending and resident groups, respectively, were altered by the 3D model. Overall, every case was modified with this additional information. All participants reported that the models helped plan the surgical approach for partial nephrectomy. Most reported improved comprehension of anatomy and confidence in surgical plan. Half reported that the 3D printed model altered their surgical plan significantly. Due to use of T1 images, reconstruction of calyces and tertiary blood vessels were limited: 8 of the 9 participants desired more information regarding these structures. (Figure presented) Conclusion Utilization of 3D modeling may aid in pre-operative and intra-operative planning for both attending and resident surgeons. While 3D models with MR imaging is feasible, computed tomography (CT) imaging may provide additional anatomical information. Future study is required to prospectively assess the utility of models and pre-operative planning and intra-operative guidance
EMBASE:72343154
ISSN: 1861-6410
CID: 2204702

von Hippel-Lindau Disease: Review of Genetics and Imaging

Shanbhogue, Krishna Prasad; Hoch, Michael; Fatterpaker, Girish; Chandarana, Hersh
von Hippel-Lindau (VHL) disease is an autosomal-dominant, hereditary, multisystem neoplasia syndrome with increased susceptibility to several benign and malignant tumors. VHL occurs in about 1 in 36,000 live births and is associated with germline mutation of the VHL tumor suppressor gene on the short arm of chromosome 3. VHL disease exhibits diverse genotype and phenotype correlations, exhibits variable intrafamilial and interfamilial expressivity, and can manifest with benign and malignant tumors of the central nervous system, kidneys, adrenals, pancreas, and reproductive organs. Imaging and management of this entity are therefore multidisciplinary. An overview of VHL disease is presented.
PMID: 27153780
ISSN: 1557-8275
CID: 2101362

Three-dimensional MR Cholangiopancreatography in a Breath Hold with Sparsity-based Reconstruction of Highly Undersampled Data

Chandarana, Hersh; Doshi, Ankur M; Shanbhogue, Alampady; Babb, James S; Bruno, Mary T; Zhao, Tiejun; Raithel, Esther; Zenge, Michael O; Li, Guobin; Otazo, Ricardo
Purpose To develop a three-dimensional breath-hold (BH) magnetic resonance (MR) cholangiopancreatographic protocol with sampling perfection with application-optimized contrast using different flip-angle evolutions (SPACE) acquisition and sparsity-based iterative reconstruction (SPARSE) of prospectively sampled 5% k-space data and to compare the results with conventional respiratory-triggered (RT) acquisition. Materials and Methods This HIPAA-compliant prospective study was institutional review board approved. Twenty-nine patients underwent conventional RT SPACE and BH-accelerated SPACE acquisition with 5% k-space sampling at 3 T. Spatial resolution and other parameters were matched when possible. BH SPACE images were reconstructed by enforcing joint multicoil sparsity in the wavelet domain (SPARSE-SPACE). Two board-certified radiologists independently evaluated BH SPARSE-SPACE and RT SPACE images for image quality parameters in the pancreatic duct and common bile duct by using a five-point scale. The Wilcoxon signed-rank test was used to compare BH SPARSE-SPACE and RT SPACE images. Results Acquisition time for BH SPARSE-SPACE was 20 seconds, which was significantly (P < .001) shorter than that for RT SPACE (mean +/- standard deviation, 338.8 sec +/- 69.1). Overall image quality scores were higher for BH SPARSE-SPACE than for RT SPACE images for both readers for the proximal, middle, and distal pancreatic duct, but the difference was not statistically significant (P > .05). For reader 1, distal common bile duct scores were significantly higher with BH SPARSE-SPACE acquisition (P = .036). More patients had acceptable or better overall image quality (scores >/= 3) with BH SPARSE-SPACE than with RT SPACE acquisition, respectively, for the proximal (23 of 29 [79%] vs 22 of 29 [76%]), middle (22 of 29 [76%] vs 18 of 29 [62%]), and distal (20 of 29 [69%] vs 13 of 29 [45%]) pancreatic duct and the proximal (25 of 28 [89%] vs 22 of 28 [79%]) and distal (25 of 28 [89%] vs 24 of 28 [86%]) common bile duct. Conclusion BH SPARSE-SPACE showed similar or superior image quality for the pancreatic and common duct compared with that of RT SPACE despite 17-fold shorter acquisition time. (c) RSNA, 2016.
PMCID:4949145
PMID: 26982678
ISSN: 1527-1315
CID: 2031992

Application of anatomically accurate, patient-specific 3D printed models from MRI data in urological oncology

Wake, N; Chandarana, H; Huang, W C; Taneja, S S; Rosenkrantz, A B
PMID: 26983650
ISSN: 1365-229x
CID: 2032012