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person:snudem01
Tubulopapillary Carcinoma of the Breast: A Distinct Morphologic Entity with Molecular and Immunohistochemical Analysis [Meeting Abstract]
Salama, Abeer; Schwartz, Christopher; Zhu, Kelsey; Vasudevaraja, Varshini; Serrano, Jonathan; Jour, George; Park, Kyung; Snuderl, Matija; Cotzia, Paolo; Darvishian, Farbod
ISI:000770360200172
ISSN: 0023-6837
CID: 5243152
ADAPTIVE RESPONSES TO GENOME-WIDE DNA DAMAGE RESULT IN TOPOLOGIC GENOME REORGANIZATION IN GLIOBLASTOMA [Meeting Abstract]
Modrek, Aram; Do, Catherine; Zhang, Zeyan; Deng, Yingwen; Karp, Jerome; Ezhilarasan, Ravesanker; Valor, Belen; Cova, Giulia; Jafari, Matiar; Snuderl, Matija; Tsirigos, Aristotelis; Skok, Jane; Sulman, Erik
ISI:000888571000458
ISSN: 1522-8517
CID: 5526662
Clinical Validation of Stimulated Raman Histology for Rapid Intraoperative Diagnosis of CNS Tumors [Meeting Abstract]
Movahed-Ezazi, Misha; Nasir-moin, Mustafa; Fang, Camila; Pizzillo, Isabella; Galbraith, Kristyn; Krasnozhen, Olga; Schroff, Seema; Drexler, Steven; William, Christopher; Zagzag, David; Orringer, Daniel; Snuderl, Matija
ISI:000798368400131
ISSN: 0022-3069
CID: 5244332
A Comparison of the Classification of Pituitary Adenomas by Clinical, Immunohistochemical and Methylation Techniques [Meeting Abstract]
Belakhoua, Sarra; Tran, Ivy; Galbraith, Kristyn; Movahed-Ezazi, Misha; Serrano, Jonathan; Vasudevaraja, Varshini; Yang, Yiying; Golfinos, John; Pacione, Donato; Agrawal, Nidhi; Snuderl, Matija
ISI:000798368400184
ISSN: 0022-3069
CID: 5244342
Comparison of Fresh Cell Pellets and Cell Blocks for Genomic Profiling of Advanced Cancers in Pleural Effusion Specimens: Promising Preliminary Results from a Validation Study [Meeting Abstract]
Chen, Fei; Kim, Christine; Shen, Guomiao; Feng, Xiaojun; Jour, George; Cotzia, Paolo; Brandler, Tamar; Sun, Wei; Snuderl, Matija; Simsir, Aylin; Park, Kyung
ISI:000770360200230
ISSN: 0023-6837
CID: 5243162
Interpretation of DNA Methylation Profiling for Diagnosis of a Tumor-to-Tumor Metastasis: A Challenging and Rare Case [Meeting Abstract]
Roberts, Leah Geiser; Movahed-Ezazi, Misha; Snuderl, Matija; William, Christopher
ISI:000798368400191
ISSN: 0022-3069
CID: 5244372
Association of hyperglycemia and molecular subclass on survival in IDH-wildtype glioblastoma
Liu, Elisa K; Vasudevaraja, Varshini; Sviderskiy, Vladislav O; Feng, Yang; Tran, Ivy; Serrano, Jonathan; Cordova, Christine; Kurz, Sylvia C; Golfinos, John G; Sulman, Erik P; Orringer, Daniel A; Placantonakis, Dimitris; Possemato, Richard; Snuderl, Matija
BACKGROUND/UNASSIGNED:Hyperglycemia has been associated with worse survival in glioblastoma. Attempts to lower glucose yielded mixed responses which could be due to molecularly distinct GBM subclasses. METHODS/UNASSIGNED:Clinical, laboratory, and molecular data on 89 IDH-wt GBMs profiled by clinical next-generation sequencing and treated with Stupp protocol were reviewed. IDH-wt GBMs were sub-classified into RTK I (Proneural), RTK II (Classical) and Mesenchymal subtypes using whole-genome DNA methylation. Average glucose was calculated by time-weighting glucose measurements between diagnosis and last follow-up. RESULTS/UNASSIGNED:= .02). Methylation clustering did not identify unique signatures associated with high or low glucose levels. Metabolomic analysis of 23 tumors showed minimal variation across metabolites without differences between molecular subclasses. CONCLUSION/UNASSIGNED:Higher average glucose values were associated with poorer OS in RTKI and Mesenchymal IDH-wt GBM, but not RTKII. There were no discernible epigenetic or metabolomic differences between tumors in different glucose environments, suggesting a potential survival benefit to lowering systemic glucose in selected molecular subtypes.
PMCID:9653172
PMID: 36382106
ISSN: 2632-2498
CID: 5384812
Metabolic-imaging of human glioblastoma live tumors: A new precision-medicine approach to predict tumor treatment response early
Morelli, Mariangela; Lessi, Francesca; Barachini, Serena; Liotti, Romano; Montemurro, Nicola; Perrini, Paolo; Santonocito, Orazio Santo; Gambacciani, Carlo; Snuderl, Matija; Pieri, Francesco; Aquila, Filippo; Farnesi, Azzurra; Naccarato, Antonio Giuseppe; Viacava, Paolo; Cardarelli, Francesco; Ferri, Gianmarco; Mulholland, Paul; Ottaviani, Diego; Paiar, Fabiola; Liberti, Gaetano; Pasqualetti, Francesco; Menicagli, Michele; Aretini, Paolo; Signore, Giovanni; Franceschi, Sara; Mazzanti, Chiara Maria
Background/UNASSIGNED:Glioblastoma (GB) is the most severe form of brain cancer, with a 12-15 month median survival. Surgical resection, temozolomide (TMZ) treatment, and radiotherapy remain the primary therapeutic options for GB, and no new therapies have been introduced in recent years. This therapeutic standstill is primarily due to preclinical approaches that do not fully respect the complexity of GB cell biology and fail to test efficiently anti-cancer treatments. Therefore, better treatment screening approaches are needed. In this study, we have developed a novel functional precision medicine approach to test the response to anticancer treatments in organoids derived from the resected tumors of glioblastoma patients. Methods/UNASSIGNED:GB organoids were grown for a short period of time to prevent any genetic and morphological evolution and divergence from the tumor of origin. We chose metabolic imaging by NAD(P)H fluorescence lifetime imaging microscopy (FLIM) to predict early and non-invasively ex-vivo anti-cancer treatment responses of GB organoids. TMZ was used as the benchmark drug to validate the approach. Whole-transcriptome and whole-exome analyses were performed to characterize tumor cases stratification. Results/UNASSIGNED:Our functional precision medicine approach was completed within one week after surgery and two groups of TMZ Responder and Non-Responder tumors were identified. FLIM-based metabolic tumor stratification was well reflected at the molecular level, confirming the validity of our approach, highlighting also new target genes associated with TMZ treatment and identifying a new 17-gene molecular signature associated with survival. The number of MGMT gene promoter methylated tumors was higher in the responsive group, as expected, however, some non-methylated tumor cases turned out to be nevertheless responsive to TMZ, suggesting that our procedure could be synergistic with the classical MGMT methylation biomarker. Conclusions/UNASSIGNED:For the first time, FLIM-based metabolic imaging was used on live glioblastoma organoids. Unlike other approaches, ex-vivo patient-tailored drug response is performed at an early stage of tumor culturing with no animal involvement and with minimal tampering with the original tumor cytoarchitecture. This functional precision medicine approach can be exploited in a range of clinical and laboratory settings to improve the clinical management of GB patients and implemented on other cancers as well.
PMCID:9483168
PMID: 36132155
ISSN: 2234-943x
CID: 5335482
Ethnic distribution of molecularly classified brain tumors [Meeting Abstract]
Fang, Camila; Tran, Ivy; Vasudevaraja, Varshini; Serrano, Jonathan; Pizzillo, Isabella; Zhu, Kelsey; Movahed-Ezazi, Misha; Gao, Chengzhuo; Galbraith, Kristyn; Snuderl, Matija
ISI:000798368400188
ISSN: 0022-3069
CID: 5244362
DNA damage drives DNA methylation and 3D chromatin organization alterations in glioblastoma [Meeting Abstract]
Modrek, Aram S.; Do, Catherine; Zhang, Zeyan; Deng, Yingwen; Karp, Jerome; Ezhilarasan, Ravesanker; Cova, Giulia; Snuderl, Matija; Tsirigos, Aristotelis; Skok, Jane; Sulman, Erik P.
ISI:000892509507561
ISSN: 0008-5472
CID: 5526672