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Introduction and overview to issue on new developments in pediatric hematology/oncology [Editorial]

Raetz, Elizabeth
PMID: 25564185
ISSN: 1531-698x
CID: 2927312

A genome-wide association study of susceptibility to acute lymphoblastic leukemia in adolescents and young adults

Perez-Andreu, Virginia; Roberts, Kathryn G; Xu, Heng; Smith, Colton; Zhang, Hui; Yang, Wenjian; Harvey, Richard C; Payne-Turner, Debbie; Devidas, Meenakshi; Cheng, I-Ming; Carroll, William L; Heerema, Nyla A; Carroll, Andrew J; Raetz, Elizabeth A; Gastier-Foster, Julie M; Marcucci, Guido; Bloomfield, Clara D; Mrozek, Krzysztof; Kohlschmidt, Jessica; Stock, Wendy; Kornblau, Steven M; Konopleva, Marina; Paietta, Elisabeth; Rowe, Jacob M; Luger, Selina M; Tallman, Martin S; Dean, Michael; Burchard, Esteban G; Torgerson, Dara G; Yue, Feng; Wang, Yanli; Pui, Ching-Hon; Jeha, Sima; Relling, Mary V; Evans, William E; Gerhard, Daniela S; Loh, Mignon L; Willman, Cheryl L; Hunger, Stephen P; Mullighan, Charles G; Yang, Jun J
Acute lymphoblastic leukemia (ALL) in adolescents and young adults (AYA: 16-39 years) is characterized by distinct presenting features and inferior prognosis compared to pediatric ALL. To better understand the disease etiology in this age group, we performed a genome-wide association study (GWAS) to comprehensively identify inherited genetic variants associated with susceptibility to AYA ALL. In the discovery GWAS, we compared genotype frequency at 635,297 SNPs in 308 AYA ALL cases and 6,661 non-ALL controls by using a logistic regression model with European, African and Native American genetic ancestries as a covariates. SNPs that reached association P
PMCID:4304112
PMID: 25468567
ISSN: 0006-4971
CID: 1371022

State of the art discovery with tumor profiling in pediatric oncology

Carroll, William L; Raetz, Elizabeth; Meyer, Julia
It is an exciting era in pediatric oncology with the advent of new technologies to comprehensively characterize cancer genomes in childhood tumors. Defining the genetic landscape of pediatric tumors has not only provided critical insight into tumor evolution, but it has also offered promise for more effective treatment in some cases, such as Philadelphia chromosome-positive acute lymphoblastic leukemia (ALL) and anaplastic lymphoma kinase (ALK)-mutated tumors. However, several challenges remain as the field of genomic tumor profiling emerges. This new technology is costly, and the overall impact on survival has yet to be determined. Tumor heterogeneity and clonal evolution have also presented challenges in the development of targeted therapy. In this article, we review breakthroughs in gene sequencing methodology and discuss examples where genomic discoveries have resulted in the recognition of tumor susceptibility as well as incorporation of targeted therapy. We also discuss how broad scale comprehensive tumor analyses have demonstrated the convergence of individual genetic alterations on common relevant pathways. Although the impact of tumor profiling is best studied within the context of rigorously designed clinical trials, there is promise that there will be growing opportunities for the adaption of precision medicine in pediatric oncology in the future.
PMID: 25993229
ISSN: 1548-8756
CID: 1863862

Frequency of actionable gene fusions in patients with Philadelphia chromosome-like (Ph-like) B-acute lymphoblastic leukemia (ALL): A retrospective study from the Children's Oncology Group (COG) [Meeting Abstract]

Reshmi, Shalini C; Harvey, Richard C; Smith, Amy; Chen, I-Ming; Valentine, Marc; Liu, Yu; Li, Yongjin; Zhang, Jinghui; Roberts, Kathryn G; Shao, Ying; Easton, John; Payne-Turner, Debbie; Devidas, Meenakshi; Heerema, Nyla; Carroll, Andrew J; Raetz, Elizabeth A; Borowitz, Michael J; Wood, Brent L; Angiolillo, Anne L; Burke, Michael M; Salzer, Wanda L; Zweidler-McKay, Patrick A; Rabin, Karen R; Carroll, William L; Loh, Mignon L; Hunger, Stephen P; Mullighan, Charles G; Willman, Cheryl L; Gastier-Foster, Julie M
ISI:000371597104357
ISSN: 1538-7445
CID: 2064532

The Genomic Landscape of Childhood T-Lineage Acute Lymphoblastic Leukemia [Meeting Abstract]

Liu, Yu; Easton, John; Shao, Ying; Wilkinson, Mark; Edmonson, Michael; Ma, Xiaotu; Smith, Malcolm A; Rusch, Michael; Auvil, Jaime Guidry; Gerhard, Daniela S; Relling, Mary V; Winick, Naomi J; Raetz, Elizabeth; Devidas, Meenakshi; Willman, Cheryl L; Harvey, Richard C; Carroll, William L; Dunsmore, Kimberly P; Winter, Stuart S; Wood, Brent L; Downing, James R; Loh, Mignon L; Hunger, Stephen P; Zhang, Jinghui; Mullighan, Charles G
ISI:000368019002128
ISSN: 1528-0020
CID: 2019402

Mixed Lineage Leukemia Rearrangements (MLL-R) Are Determinants of High Risk Disease in Homeobox A (HOXA)-deregulated T-Lineage Acute Lymphoblastic Leukemia: A Children's Oncology Group Study [Meeting Abstract]

Matlawska-Wasowska, Ksenia; Kang, Huining; Devidas, Meenakshi; Wen, Ji; Harvey, Richard C; Nickl, Christian C; Ness, Scott; Rusch, Michael; Li, Yongjin; Onozawa, Masahiro; Martinez, Carmen; Wood, Brent L; Asselin, Barbara; Chen, I-Ming L; Roberts, Kathryn G; Baruchel, Andre; Soulier, Jean; Dombret, Herve; Zhang, Jinghui; Larson, Richard S; Raetz, Elizabeth; Carroll, William L; Winick, Naomi J; Aplan, Peter D; Loh, Mignon L; Mullighan, Charles G; Hunger, Stephen P; Heerema, Nyla A; Carroll, Andrew J; Dunsmore, Kimberly P; Winter, Stuart S
ISI:000368019002131
ISSN: 1528-0020
CID: 2019422

Capizzi-Style Methotrexate with Pegasparagase (C-MTX) Is Superior to High-Dose Methotrexate (HDMTX) in T-Lineage Acute Lymphoblastic Leukemia (T-ALL): Results from Children's Oncology Group (COG) AALL0434 [Meeting Abstract]

Winter, Stuart S; Devidas, Meenakshi; Chen, Si; Asselin, Barbara; Carroll, William L; Wood, Brent L; Esiashvili, Natia; Nikki, Briegel J; Hayashi, Robert J; Loh, Mignon L; Carroll, Andrew J; Heerema, Nyla A; Raetz, Elizabeth; Winick, Naomi J; Hunger, Stephen P; Dunsmore, Kimberly P
ISI:000368019002231
ISSN: 1528-0020
CID: 2019432

Genetic and Response-Based Risk Classification Identifies a Subgroup of NCI High Risk Childhood B-Lymphoblastic Leukemia (HR B-ALL) with Outstanding Outcomes: A Report from the Children's Oncology Group (COG) [Meeting Abstract]

Raetz, Elizabeth; Loh, Mignon L; Devidas, Meenakshi; Maloney, Kelly; Larsen, Eric C; Mattano, Leonard A., Jr; Borowitz, Michael J; Wood, Brent L; Carroll, Andrew J; Heerema, Nyla A; Chen, I-Ming; Friedmann, Alison M; Schultz, Kirk R; Relling, Mary V; Harvey, Richard C; Gastier-Foster, Julie; Willman, Cheryl L; Winick, Naomi J; Hunger, Stephen P; Carroll, William L
ISI:000368019002244
ISSN: 1528-0020
CID: 2019442

Incidence of Allergic Reactions to Pegaspargase (PEG) Administered Intramuscularly Versus Intravenously (IM vs. IV) in Children and Young Adults with High Risk B-Lymphoblastic Leukemia (HR B-ALL): Results of Children's Oncology Group (COG) Studies AALL0232/AALL1131 [Meeting Abstract]

Salzer, Wanda; Burke, Michael J; Larsen, Eric C; Chen, Si; Gore, Lia; Hilden, Joanne M; Loh, Mignon L; Raetz, Elizabeth; Winick, Naomi J; Carroll, William L; Devidas, Meenakshi; Hunger, Stephen P
ISI:000368019004103
ISSN: 1528-0020
CID: 2019462

Glutamate Receptor Polymorphisms Contribute to Glucocorticoid-Associated Osteonecrosis [Meeting Abstract]

Chang, Tamara; Yang, Wenjian; Sara, Van Driest L; Kaste, Sue C; Bowten, Erica A; Basford, Melissa; Bastarache, Lisa; Roden, Dan M; Denny, Joshua C; Mattano, Leonard A; Larsen, Eric C; Winick, Naomi J; Carroll, William L; Cheng, Cheng; Pei, Deqing; Fernandez, Christian A; Liu, Chengcheng; Smith, Colton; Loh, Mignon; Raetz, Elizabeth A; Hunger, Stephen; Scheet, Paul; Jeha, Sima; Pui, Ching-Hon; Evans, William E; Devidas, Meenakshi; Relling, Mary V
ISI:000349233803192
ISSN: 1528-0020
CID: 1497552