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The regulation of protein synthesis in cancer
Cuesta, Rafael; Gupta, Malavika; Schneider, Robert J
Translational control of cancer is a multifaceted process, involving alterations in translation factor levels and activities that are unique to the different types of cancers and the different stages of disease. Translational alterations in cancer include adaptations of the tumor itself, of the tumor microenvironment, an integral component in disease, and adaptations that occur as cancer progresses from development to local disease and ultimately to metastatic disease. Adaptations include the overexpression and increased activity of specific translation factors, the physical or functional loss of translation regulatory components, increased production of ribosomes, selective mRNA translation, and alteration of signal transduction pathways to permit unfettered activation of protein synthesis. There is intense clinical interest to capitalize on the emerging new understanding of translational control in cancer by targeting specific components of the translation apparatus that are altered in disease for the development of specific cancer therapeutics. Clinical trial data are nascent but encouraging, suggesting that translational control constitutes an important new area for drug development in human cancer
PMID: 20374744
ISSN: 1878-0814
CID: 132875
Fluorescence in situ hybridization (FISH) break-apart probe helps detect lymphoma using fine-needle aspiration cell block material [Meeting Abstract]
Bragdon, Jeremy; Khullar, Poonam; Gupta, Mala; Koduru, Prasad
ISI:000259323400059
ISSN: 0002-9173
CID: 3533832
Diagnosis of intra-abdominal and mediastinal sarcoidosis with EUS-guided FNA
Michael, Hazar; Ho, Sammy; Pollack, Bonnie; Gupta, Mala; Gress, Frank
BACKGROUND:In the presence of a compatible clinical picture, the diagnosis of sarcoidosis requires pathologic confirmation of noncaseating epithelioid granuloma in affected tissues. The standard procedure of choice for most patients is a bronchoscopy with transbronchial biopsy (TBB), which has a diagnostic yield of 40% to 90%. The lowest yield with TBB is in cases that present with predominant mediastinal or intra-abdominal lymphadenopathy (LN) and minimal parenchymal lung involvement. OBJECTIVE:To study the diagnostic yield of EUS-guided FNA in diagnosing sarcoidosis with predominant LN or masses. DESIGN/METHODS:Retrospective chart review. SETTING/METHODS:Teaching university hospital. PATIENTS/METHODS:Analysis of 21 consecutive patients with sarcoidosis and predominant mediastinal and/or intra-abdominal LN or masses who underwent EUS-guided FNA. RESULTS:EUS-guided FNA diagnosed sarcoidosis in 18 of 21 patients (86%). In 3 patients, EUS-guided FNA was either not diagnostic or inconclusive, and patients underwent mediastinoscopy with lymphadenectomy, which established the diagnosis of sarcoidosis. Seven of the 21 patients (33%) had intra-abdominal LN and/or masses, and EUS-guided FNA of the intra-abdominal pathology was diagnostic of sarcoidosis in 4 of the 7 patients (57%). Four of the 21 patients (19%) had a history of malignancy, and use of EUS-guided FNA helped in ruling out the recurrence of malignancy in 3 of the 4 patients (75%). LIMITATIONS/CONCLUSIONS:Mycobacterial and fungal culture was not obtained in all patients. CONCLUSIONS:EUS-guided FNA offers a practical, minimally invasive technique for the diagnosis of sarcoidosis in patients who present with predominant mediastinal and/or intra-abdominal LN or masses.
PMID: 18155422
ISSN: 0016-5107
CID: 3484262
HBME-1 and galectin-3 inummohistochemistry is useful for differentiating papillary thyroid carcinoma from nonpapillary thyroid lesions with similar nuclear features: A retrospective study of 57 cases [Meeting Abstract]
Bhanote, Monisha; Rijhwani, Kiran; Gupta, Mala; Pollack, Simcha
ISI:000240638900108
ISSN: 0002-9173
CID: 3484242
Diagnosis of Intraabdominal and Mediastinal Sarcoidosis Using Endoscopic Ultrasound Guided Fine Needle Aspiration [Meeting Abstract]
Michael, Hazar; Ho, Sammy; Pollack, Bonnie; Gupta, Mala; Gress, Frank
ISI:000207499900708
ISSN: 0016-5107
CID: 3484222
Methods for Detecting Genetic Abnormalities in Ovarian Carcinoma Using Fluorescence in situ Hybridization and Immunohistochemistry
Chapter by: Huang, Ngan F.; Gupta, Mala; Luke, Sunny
in: HANDBOOK OF IMMUNOHISTOCHEMISTRY AND IN SITU HYBRIDIZATION OF HUMAN CARCINOMAS, VOL 4: MOLECULAR GENETICS, GASTROINTESTINAL CARCINOMA, AND OVARIAN CARCINOMA by ; Hayat, MA
SAN DIEGO : ELSEVIER ACADEMIC PRESS INC, 2006
pp. 307-332
ISBN: 978-0-08-045787-1
CID: 3484252
Functional characterization of core promoter elements: the downstream core element is recognized by TAF1
Lee, Dong-Hoon; Gershenzon, Naum; Gupta, Malavika; Ioshikhes, Ilya P; Reinberg, Danny; Lewis, Brian A
Downstream elements are a newly appreciated class of core promoter elements of RNA polymerase II-transcribed genes. The downstream core element (DCE) was discovered in the human beta-globin promoter, and its sequence composition is distinct from that of the downstream promoter element (DPE). We show here that the DCE is a bona fide core promoter element present in a large number of promoters and with high incidence in promoters containing a TATA motif. Database analysis indicates that the DCE is found in diverse promoters, supporting its functional relevance in a variety of promoter contexts. The DCE consists of three subelements, and DCE function is recapitulated in a TFIID-dependent manner. Subelement 3 can function independently of the other two and shows a TFIID requirement as well. UV photo-cross-linking results demonstrate that TAF1/TAF(II)250 interacts with the DCE subelement DNA in a sequence-dependent manner. These data show that downstream elements consist of at least two types, those of the DPE class and those of the DCE class; they function via different DNA sequences and interact with different transcription activation factors. Finally, these data argue that TFIID is, in fact, a core promoter recognition complex
PMCID:1265815
PMID: 16227614
ISSN: 0270-7306
CID: 68411
Radiology-Pathology Conference: Bilateral renal oncocytomas [Case Report]
Shin, Lewis K; Badler, Ruth L; Bruno, Frank M; Gupta, Mala; Katz, Douglas S
Oncocytoma is an uncommon benign, typically solitary renal tumor first reported in 1942. Renal oncocytomas are rarely multiple and/or bilateral. Accurate preoperative diagnosis and differentiation from renal carcinoma is difficult. We report the radiology and pathology of a patient with bilateral renal oncocytomas and review the literature of this rare presentation.
PMID: 15471666
ISSN: 0899-7071
CID: 3002312
Detection of numerical chromosomal abnormalities in epithelial ovarian neoplasms by fluorescence in situ hybridization (FISH) and a review of the current literature
Huang, Ngan-Fong Tina; Gupta, Mala; Varghese, Sara; Rao, Sujatha; Luke, Sunny
Preliminary retrospective chromosomal analysis was performed using fluorescence in situ hybridization (FISH) with alphoid DNA probes for chromosomes 1, 3, 6, 8, 12, 17, and X. Twenty-four epithelial ovarian tumors were examined in this pilot study, including 8 borderline (LMP) serous tumors, 9 serous carcinoma, and 7 mucinous carcinoma. Hybridization signals were counted to demonstrate the frequency of aneusomy, trace chromosomal progression, and identify the predominance of chromosome copy number abnormalities that are specific to a particular histotype. The preliminary results revealed almost an equal number of mean aneusomies in serous (58.13 +/- 13%) and mucinous (64.33 +/- 10%) carcinoma, both of which were slightly higher than borderline serous tumors (50.57 +/- 17%). Hyposomies 3 and X were significantly higher in mucinous than in serous ovarian carcinomas, and lowest in borderline serous tumors (P<0.05 and P<0.01). Signal losses were a more frequent abnormality in all three histologic subtypes. Mucinous carcinomas showed a loss of chromosomes 8 (45.00 +/- 28%) and 3 (43.14 +/- 16%), in addition to a loss of chromosome X (56.29 +/- 12%). Serous carcinomas showed a gain of chromosome 1 (39.44 +/- 32%), followed by losses of chromosomes 6 (37.00 +/- 20%), 17 (36.44 +/- 19%), and 8 (36.89 +/- 19%). In borderline serous tumors, the most frequent findings were losses of chromosomes 6 (38.00 +/- 17%), 12 (36.88 +/- 17%), and 3 (36.13 +/- 21%). However, further research is necessary to substantiate these preliminary results and elucidate their clinical significance. A brief review of the literature pertaining to interphase cytogenetics in ovarian epithelial tumors is discussed also.
PMID: 12051640
ISSN: 1541-2016
CID: 3484282