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Detection of Circulating Tumor DNA in Patients with Pancreatic Cancer Using Digital Next-Generation Sequencing
Macgregor-Das, Anne; Yu, Jun; Tamura, Koji; Abe, Toshiya; Suenaga, Masaya; Shindo, Koji; Borges, Michael; Koi, Chiho; Kohi, Shiro; Sadakari, Yoshihiko; Dal Molin, Marco; Almario, Jose A; Ford, Madeline; Chuidian, Miguel; Burkhart, Richard; He, Jin; Hruban, Ralph H; Eshleman, James R; Klein, Alison P; Wolfgang, Christopher L; Canto, Marcia I; Goggins, Michael
Circulating tumor DNA (ctDNA) measurements can be used to estimate tumor burden, but avoiding false-positive results is challenging. Herein, digital next-generation sequencing (NGS) is evaluated as a ctDNA detection method. Plasma KRAS and GNAS hotspot mutation levels were measured in 140 subjects, including 67 with pancreatic ductal adenocarcinoma and 73 healthy and disease controls. To limit chemical modifications of DNA that yield false-positive mutation calls, plasma DNA was enzymatically pretreated, after which DNA was aliquoted for digital detection of mutations (up to 384 aliquots/sample) by PCR and NGS. A digital NGS score of two SDs above the mean in controls was considered positive. Thirty-seven percent of patients with pancreatic cancer, including 31% of patients with stages I/II disease, had positive KRAS codon 12 ctDNA scores; only one patient had a positive GNAS mutation score. Two disease control patients had positive ctDNA scores. Low-normal-range digital NGS scores at mutation hotspots were found at similar levels in healthy and disease controls, usually at sites of cytosine deamination, and were likely the result of chemical modification of plasma DNA and NGS error rather than true mutations. Digital NGS detects mutated ctDNA in patients with pancreatic cancer with similar yield to other methods. Detection of low-level, true-positive ctDNA is limited by frequent low-level detection of false-positive mutation calls in plasma DNA from controls.
PMCID:7338889
PMID: 32205290
ISSN: 1943-7811
CID: 4741482
Hypothermia prevention in hepatopancreatobiliary surgery through a multidisciplinary perioperative protocol: A case-control, propensity-matched study [Letter]
Sorber, Rebecca; Crawford, Todd C; Wolfgang, Christopher L; Rizkalla, Nicole; Frank, Steven M; Atallah, Chady
PMID: 32361549
ISSN: 1873-4529
CID: 4741502
Synopsis of the UK National Institute for Health and Care Excellence Guidelines on the Diagnosis and Management of Pancreatic Cancer
Habib, Joseph R; Wolfgang, Christopher L
PMID: 32902606
ISSN: 2168-6262
CID: 4741632
International expert consensus on laparoscopic pancreaticoduodenectomy
Qin, Renyi; Kendrick, Michael L; Wolfgang, Christopher L; Edil, Barish H; Palanivelu, Chinnusamy; Parks, Rowan W; Yang, Yinmo; He, Jin; Zhang, Taiping; Mou, Yiping; Yu, Xianjun; Peng, Bing; Senthilnathan, Palanisamy; Han, Ho-Seong; Lee, Jae Hoon; Unno, Michiaki; Damink, Steven W M Olde; Bansal, Virinder Kumar; Chow, Pierce; Cheung, Tan To; Choi, Nim; Tien, Yu-Wen; Wang, Chengfeng; Fok, Manson; Cai, Xiujun; Zou, Shengquan; Peng, Shuyou; Zhao, Yupei
Importance/UNASSIGNED:While laparoscopic pancreaticoduodenectomy (LPD) is being adopted with increasing enthusiasm worldwide, it is still challenging for both technical and anatomical reasons. Currently, there is no consensus on the technical standards for LPD. Objective/UNASSIGNED:The aim of this consensus statement is to guide the continued safe progression and adoption of LPD. Evidence Review/UNASSIGNED:Summit on Minimally Invasive Pancreatico-Biliary Surgery in Wuhan, China. Findings/UNASSIGNED:Twenty-eight international experts from 8 countries constructed the expert panel. Sixteen statements were produced by the members of the expert panel. At least 80% of responders agreed with the majority (80%) of statements. Other than three randomized controlled trials published to date, most evidences were based on level 3 or 4 studies according to the AGREE II-GRS Instrument. Conclusions and Relevance/UNASSIGNED:The Wuhan international expert consensus meeting on LPD has produced a set of clinical practice statements for the safe development and progression of LPD. LPD is currently in its development and exploration stages, as defined by the international IDEAL framework for surgical innovation. More robust randomized controlled trial and registry study are essential to proceed with the assessment of LPD.
PMCID:7423539
PMID: 32832497
ISSN: 2304-3881
CID: 4741592
Pancreatic circulating tumor cell detection by targeted single-cell next-generation sequencing
Yu, Jun; Gemenetzis, Georgios; Kinny-Köster, Benedict; Habib, Joseph R; Groot, Vincent P; Teinor, Jonathan; Yin, Lingdi; Pu, Ning; Hasanain, Alina; van Oosten, Floortje; Javed, Ammar A; Weiss, Matthew J; Burkhart, Richard A; Burns, William R; Goggins, Michael; He, Jin; Wolfgang, Christopher L
BACKGROUND AND AIMS/OBJECTIVE:Single-cell next-generation sequencing (scNGS) technology has been widely used in genomic profiling, which relies on whole-genome amplification (WGA). However, WGA introduces errors and is especially less accurate when applied to single nucleotide variant (SNV) analysis. Targeted scNGS for SNV without WGA has not been described. We aimed to develop a method to detect circulating tumor cells (CTCs) with DNA SNVs. METHODS:We tested this targeted scNGS method with three driver mutant genes (KRAS/TP53/SMAD4) on one pancreatic cancer cell line AsPC-1 and then applied it to patients with metastatic PDAC for the validation. RESULTS:All single-cell of AsPC-1 and spiked-in AsPC-1Â cells in healthy donor blood, which were isolated by the filtration with size or by flow cytometry, were detected by targeted scNGS method. All blood samples from six patients with metastatic PDAC, for the validation of target scNGS method, showed CTCs with SNVs of KRAS/TP53/SMAD4 and the positive confirmation of immunofluorescent stainings with Pan-CK/Vimentin/CD45. Four patients with early stage disease, one patient with benign pancreatic cyst and a healthy control sample all showed concordant results between targeted scNGS and CTC enumeration. CONCLUSIONS:The novel technique of targeted scNGS for SNV analysis, without pre-amplification, is a promising method for identifying and characterizing circulating tumor cells.
PMID: 32896616
ISSN: 1872-7980
CID: 4741602
Commentary: Anatomic versus biologic resectability: The role of predictive biomarkers in guiding surgical management [Editorial]
Habib, Joseph R; Wolfgang, Christopher L
PMID: 32900493
ISSN: 1532-7361
CID: 4741612
Impact and clinical usefulness of genetic data in the surgical management of colorectal cancer liver metastasis: a narrative review
Margonis, Georgios Antonios; Kreis, Martin E; Wang, Jaeyun Jane; Kamphues, Carsten; Wolfgang, Christopher L; Weiss, Matthew J
Importance/UNASSIGNED:In patients who undergo surgery for colorectal cancer liver metastases (CRLM), a number of somatic mutations have been associated with worse overall (OS) and recurrence-free survival (RFS). Although useful, an association with prognosis does not necessarily equate to an impact on surgical management. Objective/UNASSIGNED:The aim of this review was to investigate whether the best-studied somatic mutations impact surgical management of CRLM by informing: (I) post-hepatectomy surveillance; (II) selection of surgical technique; (III) selection of optimal margin width; and (IV) selection of patients for surgery. Lastly, we discuss the refinement of genetic data from overall mutation status to specific variants, as well as lesser studied somatic mutations. Evidence Review/UNASSIGNED:We conducted a computerized search using PubMed and Google Scholar for reports published so far, using mesh headings and keywords related to genetic data and CRLM. Findings/UNASSIGNED:Genetic data may impact surgical management of CRLM in three ways. Firstly, KRAS mutations can predict lung recurrences. Secondly, KRAS mutations may help tailor margin width. Thirdly, KRAS mutations may help tailor surgical technique. Conclusions/UNASSIGNED:Although genetic data may impact post-hepatectomy surveillance, selection of surgical technique and optimal margin width, their use to guide surgical selection remains elusive, as the data cannot support denying surgery to patients according to their somatic mutation profile.
PMCID:7720057
PMID: 33299826
ISSN: 2304-3881
CID: 4741792
Mesoportal bypass, interposition graft, and mesocaval shunt: Surgical strategies to overcome superior mesenteric vein involvement in pancreatic cancer
Kinny-Köster, Benedict; van Oosten, Floortje; Habib, Joseph R; Javed, Ammar A; Cameron, John L; Lafaro, Kelly J; Burkhart, Richard A; Burns, William R; He, Jin; Fishman, Elliot K; Wolfgang, Christopher L
BACKGROUND:In pancreatic cancer, extensive tumor involvement of the mesenteric venous system poses formidable challenges to operative resection. Such involvement can result from cavernous collateral veins leading to increased intraoperative blood loss or long-segment vascular defects of not only just the superior mesenteric vein but also even jejunal/ileal branches. Strategies to facilitate margin-free resection and safe vascular reconstruction in pancreatic surgery are important, particularly because systemic control of the tumor is improving with multi-agent chemotherapy regimens. METHODS:We describe a systematic, multidisciplinary assessment for patients with pancreatic cancer that involves the superior mesenteric vein, as well as the preoperative planning of those undergoing operative resection. In addition, detailed descriptions of operative approaches and technical strategies, which evolved with increasing experience at a high-volume center, are presented. RESULTS:For the preoperative evaluation of tumor-free, vascular locations for potential reconstruction and collateralization, computed tomographic imaging with high-resolution of vascular structures (used with 3-dimensional or cinematic rendering) allows a precise calibration of radiographic data with intraoperative findings. From an operative perspective, we identified 5 potential strategies to consider for resection: collateral preservation, mesoportal bypass (preresection), mesoportal interposition graft (postresection), mesocaval shunt, and various combinations of these strategies. Many of these techniques use interposition grafts, making it essential to assess autologous veins (preferred conduit for reconstruction) or to prepare cryopreserved vascular allografts (an alternative conduit, which must be thawed and should be matched for size and blood type). CONCLUSION/CONCLUSIONS:Herein we share operative strategies to overcome involvement of the superior mesenteric vein in pancreatic cancer. Improvements in preoperative planning and operative technique can address common barriers to resection with curative intent.
PMID: 32951905
ISSN: 1532-7361
CID: 4741662
Gastric cancer following pancreaticoduodenectomy: Experience from a high-volume center and review of existing literature
Pflüger, Michael Johannes; Felsenstein, Matthäus; Schmocker, Ryan; Wood, Laura DeLong; Hruban, Ralph; Fujikura, Kohei; Rozich, Noah; van Oosten, Floortje; Weiss, Matthew; Burns, William; Yu, Jun; Cameron, John; Pratschke, Johann; Wolfgang, Christopher Lee; He, Jin; Burkhart, Richard Andrew
Background/UNASSIGNED:Prolonged survival of patients after pancreaticoduodenectomy can be associated with late complications due to altered gastrointestinal anatomy. The incidence of gastric cancer is increasingly reported. We set out to examine our experience with gastric cancer as a late complication after pancreaticoduodenectomy with a focus on incidence, risk factors, and outcomes. Methods/UNASSIGNED:We queried our prospectively collected institutional database for patients that developed gastric cancer after pancreaticoduodenectomy and conducted a systematic review of the literature. Results/UNASSIGNED:Our database revealed 6 patients who developed gastric cancer following pancreaticoduodenectomy, presenting with a mean age of 62.2 years and an even sex distribution. All of those patients underwent pancreaticoduodenectomy for malignant indications with an average time to development of metachronous gastric cancer of 8.3 years. Four patients complained of gastrointestinal discomfort prior to diagnosis of secondary malignancy. All of these cancers were poorly differentiated and were discovered at an advanced T stage (≥ 3). Only half developed at the gastrointestinal anastomosis. Four underwent surgery with a curative intent, and 2 patients are currently alive (mean postgastrectomy survival = 25.5 months). In accordance with previous literature, biliopancreatic reflux from pancreaticoduodenectomy reconstruction, underlying genetic susceptibility, and adjuvant therapy may play a causative role in later development of gastric cancer. Conclusion/UNASSIGNED:Long-term survivors after pancreaticoduodenectomy who develop nonspecific gastrointestinal complaints should be evaluated carefully for complications including gastric malignancy. This may serve as an opportunity to intervene on tumors that typically present at an advanced stage and with aggressive histology.
PMCID:7486455
PMID: 32954246
ISSN: 2589-8450
CID: 4741672
Surgical Needs of Internally Displaced Persons in Kerenik, West Darfur, Sudan
Kuwayama, David P; Chu, Kathryn M; Hartman, Zachary; Idris, Bashir; Wolfgang, Christopher; Frist, Hon William H
BACKGROUND:The burden of surgical disease in refugee and internally displaced person (IDP) populations has not been well defined. Populations fleeing conflict are mobile, limiting the effectiveness of traditional sampling methods. We employed novel sampling and survey techniques to conduct a population-based surgical needs assessment amongst IDPs in Kerenik, West Darfur, Sudan, over 4Â weeks in 2008. METHODS:Satellite imagery was used to identify man-made structures. Ground teams were guided by GPS to randomly selected households. A newly created surgical needs survey was administered by surgeons to household members. One randomly selected individual answered demographic and medical history questions pertaining to themselves and first-degree blood relatives. All household members were offered a physical examination looking for surgical disease. FINDINGS:There were 780 study participants; 82% were IDPs. A history since displacement of surgical and potentially surgical conditions was reported in 38% of respondents and by 73% of respondents in first-degree blood relatives. Surgical histories included trauma (gunshots, stabbings, assaults) (5% respondents; 27% relatives), burns (6% respondents; 14% relatives), and obstetrical problems (5% female respondents; 11% relatives). 1485 individuals agreed to physical examinations. Untreated surgical and potentially surgical disease was identified in 25% of participants. INTERPRETATION:We identified and characterized a high burden of surgical and potentially surgical disease in an IDP population in West Darfur. Our study is unique in its direct assessment of a traumatized, mobile, vulnerable population. Health officials and agencies charged with the care of IDP and refugee populations should be aware of the high prevalence of surgical and potentially surgical conditions in these communities. This study adds to the growing body of evidence that investment in surgical resources may address a significant portion of the overall burden of disease in marginalized populations.
PMID: 32462216
ISSN: 1432-2323
CID: 4741522