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Intraductal Papillary Mucinous Neoplasms Arise From Multiple Independent Clones, Each With Distinct Mutations

Fischer, Catherine G; Beleva Guthrie, Violeta; Braxton, Alicia M; Zheng, Lily; Wang, Pei; Song, Qianqian; Griffin, James F; Chianchiano, Peter E; Hosoda, Waki; Niknafs, Noushin; Springer, Simeon; Dal Molin, Marco; Masica, David; Scharpf, Robert B; Thompson, Elizabeth D; He, Jin; Wolfgang, Christopher L; Hruban, Ralph H; Roberts, Nicholas J; Lennon, Anne Marie; Jiao, Yuchen; Karchin, Rachel; Wood, Laura D
BACKGROUND & AIMS:Intraductal papillary mucinous neoplasms (IPMNs) are lesions that can progress to invasive pancreatic cancer and constitute an important system for studies of pancreatic tumorigenesis. We performed comprehensive genomic analyses of entire IPMNs to determine the diversity of somatic mutations in genes that promote tumorigenesis. METHODS:We microdissected neoplastic tissues from 6-24 regions each of 20 resected IPMNs, resulting in 227 neoplastic samples that were analyzed by capture-based targeted sequencing. Somatic mutations in genes associated with pancreatic tumorigenesis were assessed across entire IPMN lesions, and the resulting data were supported by evolutionary modeling, whole-exome sequencing, and in situ detection of mutations. RESULTS:We found a high prevalence of heterogeneity among mutations in IPMNs. Heterogeneity in mutations in KRAS and GNAS was significantly more prevalent in IPMNs with low-grade dysplasia than in IPMNs with high-grade dysplasia (P < .02). Whole-exome sequencing confirmed that IPMNs contained multiple independent clones, each with distinct mutations, as originally indicated by targeted sequencing and evolutionary modeling. We also found evidence for convergent evolution of mutations in RNF43 and TP53, which are acquired during later stages of tumorigenesis. CONCLUSIONS:In an analysis of the heterogeneity of mutations throughout IPMNs, we found that early-stage IPMNs contain multiple independent clones, each with distinct mutations, indicating their polyclonal origin. These findings challenge the model in which pancreatic neoplasms arise from a single clone. Increasing our understanding of the mechanisms of IPMN polyclonality could lead to strategies to identify patients at increased risk for pancreatic cancer.
PMID: 31175866
ISSN: 1528-0012
CID: 4741202

Dissecting the Stromal Signaling and Regulation of Myeloid Cells and Memory Effector T Cells in Pancreatic Cancer

Blair, Alex B; Kim, Victoria M; Muth, Stephen T; Saung, May Tun; Lokker, Nathalie; Blouw, Barbara; Armstrong, Todd D; Jaffee, Elizabeth M; Tsujikawa, Takahiro; Coussens, Lisa M; He, Jin; Burkhart, Richard A; Wolfgang, Christopher L; Zheng, Lei
PURPOSE:Myeloid cells are a prominent immunosuppressive component within the stroma of pancreatic ductal adenocarcinoma (PDAC). Previously, targeting myeloid cells has had limited success. Here, we sought to target the myeloid cells through modifying a specific stromal component. EXPERIMENTAL DESIGN:A murine model of metastatic PDAC treated with an irradiated whole-cell PDAC vaccine and PDAC specimens from patients treated with the same type of vaccine were used to assess the immune-modulating effect of stromal hyaluronan (HA) degradation by PEGPH20. RESULTS:effector memory T-cell infiltration, an increase in tumor-specific IFNγ, and improved survival. In the stroma of human PDACs treated with the same vaccine, decreased stromal CXCR4 expression significantly correlated with decreased HA and increased cytotoxic activities, suggesting CXCR4 is an important therapeutic target. CONCLUSIONS:This study represents the first to dissect signaling cascades following PDAC stroma remodeling via HA depletion, suggesting this not only overcomes a physical barrier for immune cell trafficking, but alters myeloid function leading to downstream selective increases in effector memory T-cell infiltration and antitumor activity.
PMCID:6726532
PMID: 31186314
ISSN: 1557-3265
CID: 4741212

Follow-up of Incidentally Detected Pancreatic Cystic Neoplasms: Do Baseline MRI and CT Features Predict Cyst Growth?

Pandey, Pallavi; Pandey, Ankur; Luo, Yan; Aliyari Ghasabeh, Mounes; Khoshpouri, Pegah; Ameli, Sanaz; O'Broin-Lennon, Anne Marie; Canto, Marcia; Hruban, Ralph H; Goggins, Michael S; Wolfgang, Christopher; Kamel, Ihab R
Background Incidental detection of pancreatic cystic neoplasm (PCN) has increased. Since a small percentage of PCNs possess malignant potential, management is challenging. The recently revised American College of Radiology (ACR) recommendations define PCN measurement and growth for different categories based on baseline cyst size. However, no data are available regarding PCN growth rate under the ACR-defined size categories. Purpose To assess growth of incidentally detected PCNs on long-term imaging follow-up using revised ACR recommendations and to evaluate the association between baseline imaging features and growth. Materials and Methods This retrospective study included PCNs with baseline imaging performed between January 2002 and May 2017, with two or more cross-sectional imaging studies performed at least 12 months apart. PCN assessment was based on ACR 2017 recommendations. Cyst features, including location, septations, and mural nodules and multiplicity, were noted. Time to cyst progression (growth by ACR criteria) was examined by using baseline PCN size, among other factors. Results A total of 646 cysts in 390 patients were followed up for a median of 50 months (range, 12-186 months). A total of 184 (28.5%) cysts increased in size, 52 (8.1%) decreased in size, and 410 (63.4%) remained stable. For groups in which baseline PCN size was smaller than 5 mm, 5-14 mm, 15-25 mm, and larger than 25 mm, growth was noted in seven (13.2%), 106 (28.9%), 49 (32.2%), and 22 (29.7%) cysts, respectively. ACR baseline size categories (subhazard ratio: 2.8 [5-14-mm PCN group], 3.4 [15-25-mm PCN group], and 2.7 [>25 mm group], as compared with the <5 mm PCN group; P < .05 for each) demonstrated association with growth. Presence of mural nodules, septations, or lesion multiplicity failed to demonstrate association with growth. Among PCNs smaller than 5 mm at baseline, 100% of PCNs at 3-year follow-up and 94.2% of PCNs at 5-year follow-up were likely to remain stable. Conclusion American College of Radiology baseline size category of 15-25-mm pancreatic cystic neoplasms (PCNs) demonstrated the highest (3.1 times) likelihood of growth, as compared with the category of PCNs smaller than 5 mm. PCNs smaller than 5 mm at baseline did not demonstrate growth at 3-year imaging follow-up. © RSNA, 2019 Online supplemental material is available for this article.
PMCID:6716563
PMID: 31310174
ISSN: 1527-1315
CID: 4741272

Cross Validation of the Monoclonal Antibody Das-1 in Identification of High-Risk Mucinous Pancreatic Cystic Lesions

Das, Koushik K; Geng, Xin; Brown, Jeffrey W; Morales-Oyarvide, Vicente; Huynh, Tiffany; Pergolini, Ilaria; Pitman, Martha B; Ferrone, Cristina; Al Efishat, Mohammad; Haviland, Dana; Thompson, Elizabeth; Wolfgang, Christopher; Lennon, Anne Marie; Allen, Peter; Lillemoe, Keith D; Fields, Ryan C; Hawkins, William G; Liu, Jingxia; Castillo, Carlos Fernandez-Del; Das, Kiron M; Mino-Kenudson, Mari
BACKGROUND & AIMS:Although pancreatic cystic lesions (PCLs) are frequently and incidentally detected, it is a challenge to determine their risk of malignancy. In immunohistochemical and enzyme-linked immunosorbent assay (ELISA) analyses of tissue and cyst fluid from pancreatic intraductal papillary mucinous neoplasms, the monoclonal antibody Das-1 identifies those at risk for malignancy with high levels of specificity and sensitivity. We aimed to validate the ability of Das-1 to identify high-risk PCLs in comparison to clinical guidelines and clinical features, using samples from a multicenter cohort. METHODS:We obtained cyst fluid samples of 169 PCLs (90 intraductal papillary mucinous neoplasms, 43 mucinous cystic neoplasms, and 36 non-mucinous cysts) from patients undergoing surgery at 4 tertiary referral centers (January 2010 through June 2017). Histology findings from surgical samples, analyzed independently and centrally re-reviewed in a blinded manner, were used as the reference standard. High-risk PCLs were those with invasive carcinomas, high-grade dysplasia, or intestinal-type intraductal papillary mucinous neoplasms with intermediate-grade dysplasia. An ELISA with Das-1 was performed in parallel using banked cyst fluid samples. We evaluated the biomarker's performance, generated area under the curve values, and conducted multivariate logistic regression using clinical and pathology features. RESULTS:The ELISA for Das-1 identified high-risk PCLs with 88% sensitivity, 99% specificity, and 95% accuracy, at a cutoff optical density value of 0.104. In 10-fold cross-validation analysis with 100 replications, Das-1 identified high-risk PCLs with 88% sensitivity and 98% specificity. The Sendai, Fukuoka, and American Gastroenterological Association guideline criteria identified high-risk PCLs with 46%, 52%, and 74% accuracy (P for comparison to Das-1 ELISA <.001). When we controlled for Das-1 in multivariate regression, main pancreatic duct dilation >5 mm (odds ratio, 14.98; 95% confidence interval, 2.63-108; P < .0012), main pancreatic duct dilation ≥1 cm (odds ratio, 47.9; 95% confidence interval, 6.39-490; P < .0001), and jaundice (odds ratio, 6.16; 95% confidence interval, 1.08-36.7; P = .0397) were significantly associated with high-risk PCLs. CONCLUSIONS:We validated the ability of an ELISA with the monoclonal antibody Das-1 to detect PCLs at risk for malignancy with high levels of sensitivity and specificity. This biomarker might be used in conjunction with clinical guidelines to identify patients at risk for malignancy.
PMCID:6707850
PMID: 31175863
ISSN: 1528-0012
CID: 4741192

Recurrence after neoadjuvant therapy and resection of borderline resectable and locally advanced pancreatic cancer

Groot, Vincent P; Blair, Alex B; Gemenetzis, Georgios; Ding, Ding; Burkhart, Richard A; Yu, Jun; Borel Rinkes, Inne H M; Molenaar, I Quintus; Cameron, John L; Weiss, Matthew J; Wolfgang, Christopher L; He, Jin
INTRODUCTION/BACKGROUND:The incidence, timing, and implications of recurrence in patients who underwent neoadjuvant treatment and surgical resection of borderline resectable (BRPC) or locally advanced (LAPC) pancreatic cancer are not well established. MATERIALS AND METHODS/METHODS:Patients with BRPC/LAPC who underwent post-neoadjuvant resection between 2007 and 2015 were included. Associations between clinicopathologic characteristics and specific recurrence locations, recurrence-free survival (RFS), and overall survival from resection (OS) were assessed using Cox regression analyses. RESULTS:For 231 included patients, median survival from diagnosis and resection were 28.0 and 19.8 months, respectively. After a median RFS of 7.9 months, 189 (81.8%) patients had recurred. Multiple-site (n = 87, 46.0%) and liver-only recurrence (n = 28, 14.8%) generally occurred earlier and resulted in significantly worse OS when compared to local-only (n = 52, 27.5%) or lung-only recurrence (n = 18, 9.5%). Microscopic perineural invasion, yN1-yN2 status and elevated pre-surgery CA 19-9 >100 U/mL were associated with both local-only and multiple-site/liver-only recurrence. R1-margin was associated with local-only recurrence (HR 2.03). yN1-yN2 status and microscopic perineural invasion were independent predictors for both poor RFS and OS, while yT3-yT4 tumor stage (HR 1.39) and poor tumor differentiation (HR 1.60) were only predictive of poor OS. Adjuvant therapy was independently associated with both prolonged RFS (HR 0.73; median 7.0 vs. 10.9 months) and OS (HR 0.69; median 15.4 vs. 22.7 months). CONCLUSION/CONCLUSIONS:Despite neoadjuvant therapy leading to resection and relatively favorable pathologic tumor characteristics in BRPC/LAPC patients, more than 80% of patients experienced disease recurrence, 72.5% of which occurred at distant sites.
PMID: 31023560
ISSN: 1532-2157
CID: 4741112

Circulating Tumor DNA as a Clinical Test in Resected Pancreatic Cancer

Groot, Vincent P; Mosier, Stacy; Javed, Ammar A; Teinor, Jonathan A; Gemenetzis, Georgios; Ding, Ding; Haley, Lisa M; Yu, Jun; Burkhart, Richard A; Hasanain, Alina; Debeljak, Marija; Kamiyama, Hirohiko; Narang, Amol; Laheru, Daniel A; Zheng, Lei; Lin, Ming-Tseh; Gocke, Christopher D; Fishman, Elliot K; Hruban, Ralph H; Goggins, Michael G; Molenaar, I Quintus; Cameron, John L; Weiss, Matthew J; Velculescu, Victor E; He, Jin; Wolfgang, Christopher L; Eshleman, James R
PURPOSE:ctDNA assay in a Clinical Laboratory Improvement Amendments (CLIA) and College of American Pathology-certified clinical laboratory. EXPERIMENTAL DESIGN:mutations (G12D, G12V, G12R, and Q61H) in liquid biopsies. For clinical validation, 290 preoperative and longitudinal postoperative plasma samples were collected from 59 patients with PDAC. The utility of ctDNA status to predict PDAC recurrence during follow-up was assessed. RESULTS:= 0.011). CONCLUSIONS:ctDNA in a CLIA laboratory setting can be used to predict recurrence and survival in patients with PDAC.
PMCID:7403524
PMID: 31142500
ISSN: 1557-3265
CID: 4741182

Liquid Biopsy as Surrogate for Tissue for Molecular Profiling in Pancreatic Cancer: A Meta-Analysis Towards Precision Medicine

Luchini, Claudio; Veronese, Nicola; Nottegar, Alessia; Cappelletti, Vera; Daidone, Maria G; Smith, Lee; Parris, Christopher; Brosens, Lodewijk A A; Caruso, Maria G; Cheng, Liang; Wolfgang, Christopher L; Wood, Laura D; Milella, Michele; Salvia, Roberto; Scarpa, Aldo
Liquid biopsy (LB) is a non-invasive approach representing a promising tool for new precision medicine strategies for cancer treatment. However, a comprehensive analysis of its reliability for pancreatic cancer (PC) is lacking. To this aim, we performed the first meta-analysis on this topic. We calculated the pooled sensitivity, specificity, positive (LR+) and negative (LR-) likelihood ratio, and diagnostic odds ratio (DOR). A summary receiver operating characteristic curve (SROC) and area under curve (AUC) were used to evaluate the overall accuracy. We finally assessed the concordance rate of all mutations detected by multi-genes panels. Fourteen eligible studies involving 369 patients were included. The overall pooled sensitivity and specificity were 0.70 and 0.86, respectively. The LR+ was 3.85, the LR- was 0.34 and DOR was 15.84. The SROC curve with an AUC of 0.88 indicated a relatively high accuracy of LB for molecular characterization of PC. The concordance rate of all mutations detected by multi-genes panels was 31.9%. LB can serve as surrogate for tissue in the molecular profiling of PC, because of its relatively high sensitivity, specificity and accuracy. It represents a unique opportunity to be further explored towards its introduction in clinical practice and for developing new precision medicine approaches against PC.
PMCID:6721631
PMID: 31405192
ISSN: 2072-6694
CID: 4741322

Liquid biopsy for the detection and management of surgically resectable tumors

Blanco, Barbara Aldana; Wolfgang, Christopher L
BACKGROUND:Traditional biopsies have numerous limitations in the developing era of precision medicine, with cancer treatment that relies on biomarkers to guide therapy. Tumor heterogeneity raises the potential for sampling error with the use of traditional biopsy of the primary tumor. Moreover, tumors continuously evolve as new clones arise in the natural course of the disease and under the pressure of treatment. Since traditional biopsy is invasive, it is neither feasible nor practical to perform serial biopsies to guide treatment in real time. PURPOSE/OBJECTIVE:The current manuscript will review the most commonly used types of liquid biopsy and how these apply to surgical patients in terms of diagnosis, prediction of outcome, and guiding therapy. CONCLUSIONS:Liquid biopsy has the potential to overcome many of the limitations of traditional biopsy as a highly tailored, minimally invasive, and cost-effective method to screen and monitor response to treatment. However, many challenges still need to be overcome before liquid biopsy becomes a reliable and widely available option.
PMID: 31385024
ISSN: 1435-2451
CID: 4741302

Benchmarks in Pancreatic Surgery: A Novel Tool for Unbiased Outcome Comparisons

Sánchez-Velázquez, Patricia; Muller, Xavier; Malleo, Giuseppe; Park, Joon-Seong; Hwang, Ho-Kyoung; Napoli, Niccolò; Javed, Ammar A; Inoue, Yosuke; Beghdadi, Nassiba; Kalisvaart, Marit; Vigia, Emanuel; Walsh, Carrie D; Lovasik, Brendan; Busquets, Juli; Scandavini, Chiara; Robin, Fabien; Yoshitomi, Hideyuki; Mackay, Tara M; Busch, Olivier R; Hartog, Hermien; Heinrich, Stefan; Gleisner, Ana; Perinel, Julie; Passeri, Michael; Lluis, Nuria; Raptis, Dimitri A; Tschuor, Christoph; Oberkofler, Christian E; DeOliveira, Michelle L; Petrowsky, Henrik; Martinie, John; Asbun, Horacio; Adham, Mustapha; Schulick, Richard; Lang, Hauke; Koerkamp, Bas Groot; Besselink, Marc G; Han, Ho-Seong; Miyazaki, Masaru; Ferrone, Cristina R; Fernández-Del Castillo, Carlos; Lillemoe, Keith D; Sulpice, Laurent; Boudjema, Karim; Del Chiaro, Marco; Fabregat, Joan; Kooby, David A; Allen, Peter; Lavu, Harish; Yeo, Charles J; Barroso, Eduardo; Roberts, Keith; Muiesan, Paolo; Sauvanet, Alain; Saiura, Akio; Wolfgang, Christopher L; Cameron, John L; Boggi, Ugo; Yoon, Dong-Sup; Bassi, Claudio; Puhan, Milo A; Clavien, Pierre-Alain
OBJECTIVE:To use the concept of benchmarking to establish robust and standardized outcome references after pancreatico-duodenectomy (PD). BACKGROUND:Best achievable results after PD are unknown. Consequently, outcome comparisons among different cohorts, centers or with novel surgical techniques remain speculative. METHODS:This multicenter study analyzes consecutive patients (2012-2015) undergoing PD in 23 international expert centers in pancreas surgery. Outcomes in patients without significant comorbidities and major vascular resection (benchmark cases) were analyzed to establish 20 outcome benchmarks for PD. These benchmarks were tested in a cohort with a poorer preoperative physical status (ASA class ≥3) and a cohort treated by minimally invasive approaches. RESULTS:Two thousand three hundred seventy-five (38%) low-risk cases out of a total of 6186 PDs were analyzed, disclosing low in-hospital mortality (≤1.6%) but high morbidity, with a 73% benchmark morbidity rate cumulated within 6 months following surgery. Benchmark cutoffs for pancreatic fistulas (B-C), severe complications (≥ grade 3), and failure-to-rescue rate were 19%, 30%, and 9%, respectively. The ASA ≥3 cohort showed comparable morbidity but a higher in hospital-mortality (3% vs 1.6%) and failure-to-rescue rate (16% vs 9%) than the benchmarks. The proportion of benchmark cases performed varied greatly across centers and continents for both open (9%-93%) and minimally invasive (11%-62%) PD. Centers operating mostly on complex PD cases disclosed better results than those with a majority of low-risk cases. CONCLUSION:The proposed outcome benchmarks for PD, established in a large-scale international patient cohort and tested in 2 different cohorts, may allow for meaningful comparisons between different patient cohorts, centers, countries, and surgical techniques.
PMID: 30829701
ISSN: 1528-1140
CID: 4741052

Isolated pulmonary recurrence after resection of pancreatic cancer: the effect of patient factors and treatment modalities on survival

Groot, Vincent P; Blair, Alex B; Gemenetzis, Georgios; Ding, Ding; Burkhart, Richard A; van Oosten, A Floortje; Molenaar, I Quintus; Cameron, John L; Weiss, Matthew J; Yang, Stephen C; Wolfgang, Christopher L; He, Jin
BACKGROUND:The literature suggests favorable survival for patients with isolated pulmonary recurrence after resection of pancreatic ductal adenocarcinoma (PDAC) as compared to other recurrence patterns. Within this cohort, it remains unclear what factors are associated with improved survival. METHODS:Patients who developed pulmonary recurrence after pancreatectomy were selected from a prospective database. Predictors for post-recurrence survival (PRS) were analyzed using a multivariable Cox regression model. RESULTS:Ninety-six patients were included. Median recurrence-free survival (RFS), PRS and overall survival (OS) were 16.3, 18.8 and 39.6 months, respectively. Further systemic treatment and/or metastasectomy (n = 64, 67%) was associated with significantly improved PRS and OS when compared to best supportive care (n = 35, 22%) (26.3 vs. 5.3 and 48.1 vs. 18.4, respectively; both P < 0.001). Patients who were able to undergo metastasectomy (n = 19) achieved a PRS and OS of 35.0 and 68.9 months, respectively. More than 5 pulmonary lesions, symptoms and CA 19-9 ≥100 U/mL at time of recurrence were predictive of decreased PRS. A recurrence-free interval of >16 months and treatment for recurrence were independently associated with improved PRS. CONCLUSIONS:Isolated pulmonary recurrence occurs in 13% of patients with recurrent PDAC and is associated with a median OS of 40 months. Aggressive treatment in highly selected patients was correlated with improved survival.
PMID: 30777697
ISSN: 1477-2574
CID: 4741022