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Predictive Factors Associated with Radiation Myelitis in Pediatric Cancer Patients: Results from the Pediatric Normal Tissue Effects in the Clinic (PENTEC) Initiative [Meeting Abstract]

Cooper, B. T.; Oh, C.; Mayo, C.; Rao, A. Nageswara; Keating, G. F.; Constine, L. S.; Laack, N. N., II
ISI:000447811601357
ISSN: 0360-3016
CID: 3493452

Consolidation Radiation Therapy for Extensive Stage Small Cell Lung Cancer: Determining the Optimal Dose Using the National Cancer Data Base [Meeting Abstract]

Shaikh, F.; Wu, P.; Tam, M.; Gerber, N. K.; Schiff, P. B.; Cooper, B. T.
ISI:000447811602196
ISSN: 0360-3016
CID: 3493312

Hypofractionated Whole-Breast Irradiation in Women Less Than 50 Years Old Treated on 4 Prospective Protocols

Shaikh, Fauzia; Chew, Jessica; Hochman, Tsivia; Purswani, Juhi; Maisonet, Olivier; Peat, Elecia; Huppert, Nelly; Cooper, Benjamin T; Tam, Moses; Goldberg, Judith D; Perez, Carmen A; Formenti, Silvia C; Gerber, Naamit K
PURPOSE/OBJECTIVE:Hypofractionated whole-breast radiation therapy (RT) has proved to be equivalent to conventionally fractionated RT in multiple randomized trials. There is controversy regarding its use in younger women because of their underrepresentation in trials and the concern for late toxicity. We evaluated disease control and cosmetic outcomes in patients aged <50 years treated with hypofractionated RT in 4 prospective single-institutional trials. METHODS AND MATERIALS/METHODS:From 2003 to 2015, 1313 patients were enrolled in 4 prospective protocols investigating the use of adjuvant hypofractionated RT after breast-conserving surgery with a daily or weekly concomitant boost. We identified the records of 348 patients aged <50 years at consultation for this analysis. Overall survival, disease-free survival, and local recurrence-free survival were estimated using the Kaplan-Meier method by study and across studies using meta-analytic methods. The late effects of RT, clinician-rated cosmesis, and patient-rated cosmesis were also evaluated. RESULTS:With a median follow-up period of 66.9 months, the overall survival rate was 99.6%, the disease-free survival rate was 96.3%, and the local recurrence-free survival rate was 97.7% at 3 years. Clinician-rated cosmesis (n = 242) was excellent or good in 93.4% of cases and fair or poor in 6.6%. Patient-rated cosmesis (n = 259) was excellent or good in 86.1% and fair or poor in 13.9%. When patients rated themselves differently than their physicians, patients more often rated themselves poorly compared with their physicians (P = .0044, Cochran-Mantel-Haenszel test). CONCLUSIONS:At a median follow-up of 5 years, an analysis of patients aged <50 years demonstrated that hypofractionated RT was safe and effective, with good to excellent cosmesis as assessed by both clinicians and patients.
PMID: 29859789
ISSN: 1879-355x
CID: 3144252

Hypofractionated Whole Breast Irradiation in Women Less Than 50 Years Old Treated on Prospective Protocols: A Report on Long-Term Cosmesis [Meeting Abstract]

Shaikh, F; Chew, J; Perez, CA; Tam, M; Cooper, BT; Maisonet, OG; Peat, E; Huppert, NE; Formenti, SC; Gerber, NK
ISI:000411559106098
ISSN: 1879-355x
CID: 2767682

Hypofractionated Proton Therapy for Early Stage Non-small Cell Lung Cancer: Clinical Outcomes and Comparative Dosimetric Analysis [Meeting Abstract]

Cooper, BT; Mah, D; Chen, CC; McCarthy, A; Darwish, H; Cahlon, O; Tsai, HK; Chon, BH
ISI:000411559103235
ISSN: 1879-355x
CID: 2767252

A DNA Methylation-Based Classifier for Accurate Molecular Diagnosis of Bone Sarcomas [Meeting Abstract]

Cooper, BT; Wu, SP; Bu, F; Bowman, CJ; Killian, JK; Serrano, J; Wang, S; Gorovets, D; Gorlick, RG; Ladanyi, M; Thomas, K; Snuderl, M; Karajannis, MA
ISI:000411559104225
ISSN: 1879-355x
CID: 2766742

A DNA methylation-based classifier for accurate molecular diagnosis of bone sarcomas [Meeting Abstract]

Wu, S; Cooper, B T; Bu, F; Bowman, C; Killian, K; Serrano, J; Wang, S; Jackson, T; Gorovets, D; Gorlick, R G; Ladanyi, M; Thomas, K; Snuderl, M; Karajannis, M A
Background: Bone sarcomas present a unique diagnostic challenge because of the considerable morphologic overlap between different entities. The choice of optimal treatment, however, is dependent upon accurate diagnosis. Genome-wide DNA methylation profiling has emerged as a new approach to aid in the diagnosis of brain tumors, with diagnostic accuracy exceeding standard histopathology. In this work we developed and validated a methylation based classifier to differentiate between osteosarcoma, Ewing's sarcoma, and synovial sarcoma. Methods: DNA methylation status of 482,421 CpG sites in 15 osteosarcoma, 10 Ewing's sarcoma, and 11 synovial sarcoma samples were measured using the Illumina HumanMethylation450 array. From this training set of 36 samples we developed a random forest classifier using the 400 most differentially methylated CpG sites (FDR q value < 0.001). This classifier was then validated on 10 synovial sarcoma samples from TCGA, 86 osteosarcoma samples from TARGET-OS, and 15 Ewing's sarcoma from a recently published series (Huertas-Martinez et al., Cancer Letters 2016). Results: Methylation profiling revealed three distinct molecular clusters, each enriched with a single sarcoma subtype. Within the validation cohorts, all samples from TCGA were correctly classified as synovial sarcoma (10/10, sensitivity and specificity 100%). All but one sample from TARGET-OS were classified as osteosarcoma (85/86, sensitivity 98%, specificity 100%) and all but one sample from the Ewing's sarcoma series was classified as Ewing's sarcoma (14/15, sensitivity 93%, specificity 100%). The single misclassified osteosarcoma sample was classified as Ewing's sarcoma, and was later determined to be a misdiagnosed Ewing's sarcoma based on RNA-Seq demonstrating high EWRS1 and ETV1 expression. An additional clinical sample that was misdiagnosed as a synovial sarcoma by initial histolopathology, was accurately recognized as osteosarcoma by the methylation classifier. Conclusions: Osteosarcoma, Ewing's sarcoma and synovial sarcoma have distinct epigenetic profiles. Our validated methylation-based classifier can be used to provide an accurate diagnosis when histological and standard techniques are inconclusive
EMBASE:617435472
ISSN: 0732-183x
CID: 2651072

Impact of Evolving Radiation Therapy Techniques on Implant-Based Breast Reconstruction

Muresan, Horatiu; Lam, Gretl; Cooper, Benjamin T; Perez, Carmen A; Hazen, Alexes; Levine, Jamie P; Saadeh, Pierre B; Choi, Mihye; Karp, Nolan S; Ceradini, Daniel J
BACKGROUND: Patients undergoing implant-based reconstruction in the setting of postmastectomy radiation therapy suffer from increased complications and inferior outcomes compared with those not irradiated, but advances in radiation delivery have allowed for more nuanced therapy. The authors investigated whether these advances impact patient outcomes in implant-based breast reconstruction. METHODS: Retrospective chart review identified all implant-based reconstructions performed at a single institution from November of 2010 to November of 2013. These data were cross-referenced with a registry of patients undergoing breast irradiation. Patient demographics, treatment characteristics, and outcomes were analyzed. RESULTS: Three hundred twenty-six patients (533 reconstructions) were not irradiated, whereas 83 patients (125 reconstructions) received radiation therapy; mean follow-up was 24.7 months versus 26.0 months (p = 0.49). Overall complication rates were higher in the irradiated group (35.2 percent versus 14.4 percent; p < 0.01). Increased maximum radiation doses to the skin were associated with complications (maximum dose to skin, p = 0.05; maximum dose to 1 cc of skin, p = 0.01). Different treatment modalities (e.g., three-dimensional conformal, intensity-modulated, field-in-field, and hybrid techniques) did not impact complication rates. Prone versus supine positioning significantly decreased the maximum skin dose (58.5 Gy versus 61.7 Gy; p = 0.05), although this did not translate to significantly decreased complication rates in analysis of prone versus supine positioning. CONCLUSIONS: As radiation techniques evolve, the maximum dose to skin should be given consideration similar to that for heart and lung dosing, to optimize reconstructive outcomes. Prone positioning significantly decreases the maximum skin dose and trends toward significance in reducing reconstructive complications. With continued study, this may become clinically important. Interdepartmental studies such as this one ensure quality of care. CLINICAL QUESTION/LEVEL OF EVIDENCE: Therapeutic, III.
PMID: 28538549
ISSN: 1529-4242
CID: 2574862

Genome-Wide DNA Methylation Profiling in the Diagnosis of Pediatric Ewing Sarcoma, Osteosarcoma, and Synovial Sarcoma [Meeting Abstract]

Bu, Fang; Cooper, Benjamin; Wu, Peter; Ladanyi, Marc; Gorlick, Richard G; Karajannis, Matthias; Thomas, Kristen M; Snuderl, Matija
ISI:000394467302440
ISSN: 1530-0285
CID: 2517642

Genome-Wide DNA Methylation Profiling in the Diagnosis of Pediatric Ewing Sarcoma, Osteosarcoma, and Synovial Sarcoma [Meeting Abstract]

Bu, Fang; Cooper, Benjamin; Wu, Peter; Ladanyi, Marc; Gorlick, Richard G; Karajannis, Matthias; Thomas, Kristen M; Snuderl, Matija
ISI:000393724402348
ISSN: 1530-0307
CID: 2506822