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Identification of novel biomarkers differentially expressed between African-American and Caucasian-American prostate cancer patients
Ye, Fei; Han, Xiaoxia; Shao, Yonzhao; Lo, Jingzhi; Zhang, Fengxia; Wang, Jinhua; Melamed, Jonathan; Deng, Fang-Ming; Sfanos, Karen S; De Marzo, Angelo; Ren, Guoping; Wang, Dongwen; Zhang, David; Lee, Peng
Prostate cancer (PCa) incidence and mortality rate vary among racial and ethnic groups with the highest occurrence in African American (AA) men who have mortality rates twice that of Caucasians (CA). In this study, we focused on differential expression of proteins in AA prostate cancer compared to CA using Protein Pathway Array Analysis (PPAA), in order to identify protein biomarkers associated with PCa racial disparity. Fresh frozen prostate samples (n=90) obtained from radical prostatectomy specimens with PCa, including 25 AA tumor, 21 AA benign, 23 CA tumor, 21 CA benign samples were analyzed. A total of 286 proteins and phosphoproteins were assessed using PPAA. By PPAA analysis, 33 proteins were found to be significantly differentially expressed in tumor tissue (n=48, including both CA and AA) in comparison to benign tissue (n=42). We further compared protein expression levels between AA and CA tumor groups and found that 3 proteins were differentially expressed (P<0.05 and q<5%). Aurora was found to be significantly increased in AA tumors, while Cyclin D1 and HNF-3a proteins were downregulated in AA tumors. Predicted risk score was significantly different between AA and CA ethnic groups using logistic regression analysis. In conclusion, we identified Aurora, Cyclin D1 and HNF-3a proteins as being differentially expressed between AA and CA in PCa tissue. Our study suggests that these proteins might be involved in different pathways that lead to aggressive PCa behavior in AA patients, potentially serving as biomarkers for the PCa racial disparity.
PMCID:9077070
PMID: 35530298
ISSN: 2156-6976
CID: 5214062
Methylation Profiling of Papillary Renal Neoplasm with Reverse Polarity [Meeting Abstract]
Park, Kyung; Serrano, Jonathan; Tran, Ivy; Feng, Xiaojun; Chen, Fei; Vasudevaraja, Varshini; Mirsadraei, Leili; Snuderl, Matija; Deng, Fang-Ming
ISI:000770361801237
ISSN: 0893-3952
CID: 5208642
Kidney Tumor Classifier Using Whole Genome Methylation Array [Meeting Abstract]
Park, Kyung; Serrano, Jonathan; Chen, Fei; Tran, Ivy; Vasudevaraja, Varshini; Hoskoppal, Deepthi; Deng, Fang-Ming; Snuderl, Matija
ISI:000770361801236
ISSN: 0893-3952
CID: 5243342
Editorial: Molecular biomarkers and imaging markers in the prediction, diagnosis, and prognosis of bladder cancer
Luo, Yongwen; Deng, Fang-Ming; Zhang, Yi; Xiao, Yu
PMCID:9614322
PMID: 36313549
ISSN: 2296-634x
CID: 5358432
Stimulated Raman Spectroscopy as Rapid On-site Evaluation of Renal Neoplastic and Non-neoplastic Biopsies [Meeting Abstract]
Ren, Joyce; Mannas, Miles; Jones, Derek; Orringer, Daniel; Taneja, Samir; Deng, Fang-Ming
ISI:000770361803144
ISSN: 0893-3952
CID: 5243372
The Spectrum of Biopsy Site Histologic Change in the Radical Prostatectomy Specimen [Meeting Abstract]
Melamed, Jonathan; Ren, Joyce; Deng, Fang-Ming; Hoskoppal, Deepthi; Huang, Hongying; Jones, Derek
ISI:000770361801220
ISSN: 0893-3952
CID: 5243332
A phase 1/2 multicenter investigator-initiated trial of DKN-01 as monotherapy or in combination with docetaxel for the treatment of metastatic castration-resistant prostate cancer (mCRPC). [Meeting Abstract]
Wise, David R.; Pachynski, Russell Kent; Denmeade, Samuel R.; Aggarwal, Rahul Raj; Febles, Victor Ricardo Adorno; Balar, Arjun Vasant; Economides, Minas P.; Sirard, Cynthia A.; Troxel, Andrea; Griglun, Sarah; Leis, Dayna; Yang, Nina; Aranchiy, Viktoriya; Machado, Sabrina; Waalkes, Erika; Gargano, Gabrielle; Deng, Fang-Ming; Fadel, Ezeddin; Chiriboga, Luis; Melamed, Jonathan
ISI:000863680301467
ISSN: 0732-183x
CID: 5525642
Long non-coding RNA in prostate cancer
An, Christine; Wang, Ian; Li, Xin; Xia, Rong; Deng, Fangming
Prostate cancer is the most frequently diagnosed cancer in males and its development and progression remains an important area of study. Recently, long non-coding RNAs (lncRNAs) have been evidenced as key players in cancer pathogenesis. Specifically, dysregulation of long non-coding RNA (lncRNA) expression has shown to affect tumor proliferation and metastasis, acting as either tumor suppressors or oncogenes. However, its specific mechanisms and functions in prostate cancer remain unclear. This review provides an overview of currently available information on prostate cancer-related lncRNAs, including GAS5, GAS-007, MEG3, PCA3, PCAT14, PCAT1, PVT1, UCA1, SChLAP1, MALAT1, HOTAIR, and NEAT1. Notable tumor growth inhibitors include GAS5 and MEG3. GAS5 is evidenced to interfere with the AKT/MTOR signaling pathway through targeting microRNA mir-103. MEG3, however, is proposed to inhibit the cycle, sponge miR-9-5p, and induce gene silencing. PCAT1, PVT1, and UCA1 are important tumor growth promoters. PCAT1 is indicated to be a transcriptional repressor, a mir-145-5P sponge, and a P13K/AKT pathway activator. Studies suggest that PVT1 acts via microRNA targeting and regulating proliferating cell nuclear antigen. UCA1 may sponge miR-204 and miR-331-3p as well as regulate myosin VI. Thorough understanding of these lncRNAs may elucidate new aspects of prostate cancer pathology and serve a pivotal role in developing novel diagnostic and prognostic techniques.
PMCID:9301060
PMID: 35874287
ISSN: 2330-1910
CID: 5276152
Methylation Profiling of Papillary Renal Neoplasm with Reverse Polarity [Meeting Abstract]
Park, Kyung; Serrano, Jonathan; Tran, Ivy; Feng, Xiaojun; Chen, Fei; Vasudevaraja, Varshini; Mirsadraei, Leili; Snuderl, Matija; Deng, Fang-Ming
ISI:000770360201237
ISSN: 0023-6837
CID: 5208632
Middle Ear "Adenoma": a Neuroendocrine Tumor with Predominant L Cell Differentiation
Asa, Sylvia L; Arkun, Knarik; Tischler, Arthur S; Qamar, Adnan; Deng, Fang-Ming; Perez-Ordonez, Bayardo; Weinreb, Ilan; Bishop, Justin A; Wenig, Bruce M; Mete, Ozgur
This morphological and immunohistochemical study demonstrates that tumors currently known as "middle ear adenomas" are truly well-differentiated epithelial neuroendocrine tumors (NETs) composed of cells comparable to normal intestinal L cells, and therefore, these tumors resemble hindgut NETs. These tumors show consistent expression of glucagon, pancreatic polypeptide, PYY, and the transcription factor SATB2, as well as generic neuroendocrine markers and keratins. The same L cell markers are expressed by cells within the normal middle ear epithelium. These markers define a valuable immunohistochemical profile that can be used for differential diagnosis of middle ear neoplasms, particularly in distinguishing epithelial NETs from paragangliomas. The discovery of neuroendocrine cells expressing the same markers in non-neoplastic middle ear mucosa opens new areas of investigation into the physiology of the normal middle ear and the pathophysiology of middle ear disorders.
PMID: 34041698
ISSN: 1559-0097
CID: 4894972