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A Bronchial Genomic Classifier for the Diagnostic Evaluation of Lung Cancer
Silvestri, Gerard A; Vachani, Anil; Whitney, Duncan; Elashoff, Michael; Porta Smith, Kate; Ferguson, J Scott; Parsons, Ed; Mitra, Nandita; Brody, Jerome; Lenburg, Marc E; Spira, Avrum; [Rafeq, Samaan]
BACKGROUND: Bronchoscopy is frequently nondiagnostic in patients with pulmonary lesions suspected to be lung cancer. This often results in additional invasive testing, although many lesions are benign. We sought to validate a bronchial-airway gene-expression classifier that could improve the diagnostic performance of bronchoscopy. METHODS: Current or former smokers undergoing bronchoscopy for suspected lung cancer were enrolled at 28 centers in two multicenter prospective studies (AEGIS-1 and AEGIS-2). A gene-expression classifier was measured in epithelial cells collected from the normal-appearing mainstem bronchus to assess the probability of lung cancer. RESULTS: A total of 639 patients in AEGIS-1 (298 patients) and AEGIS-2 (341 patients) met the criteria for inclusion. A total of 43% of bronchoscopic examinations were nondiagnostic for lung cancer, and invasive procedures were performed after bronchoscopy in 35% of patients with benign lesions. In AEGIS-1, the classifier had an area under the receiver-operating-characteristic curve (AUC) of 0.78 (95% confidence interval [CI], 0.73 to 0.83), a sensitivity of 88% (95% CI, 83 to 92), and a specificity of 47% (95% CI, 37 to 58). In AEGIS-2, the classifier had an AUC of 0.74 (95% CI, 0.68 to 0.80), a sensitivity of 89% (95% CI, 84 to 92), and a specificity of 47% (95% CI, 36 to 59). The combination of the classifier plus bronchoscopy had a sensitivity of 96% (95% CI, 93 to 98) in AEGIS-1 and 98% (95% CI, 96 to 99) in AEGIS-2, independent of lesion size and location. In 101 patients with an intermediate pretest probability of cancer, the negative predictive value of the classifier was 91% (95% CI, 75 to 98) among patients with a nondiagnostic bronchoscopic examination. CONCLUSIONS: The gene-expression classifier improved the diagnostic performance of bronchoscopy for the detection of lung cancer. In intermediate-risk patients with a nondiagnostic bronchoscopic examination, a negative classifier score provides support for a more conservative diagnostic approach. (Funded by Allegro Diagnostics and others; AEGIS-1 and AEGIS-2 ClinicalTrials.gov numbers, NCT01309087 and NCT00746759.).
PMCID:4838273
PMID: 25981554
ISSN: 1533-4406
CID: 2527032
Therapeutic bronchoscopy for malignant central airway obstruction: success rates and impact on dyspnea and quality of life
Ost, David E; Ernst, Armin; Grosu, Horiana B; Lei, Xiudong; Diaz-Mendoza, Javier; Slade, Mark; Gildea, Thomas R; Machuzak, Michael S; Jimenez, Carlos A; Toth, Jennifer; Kovitz, Kevin L; Ray, Cynthia; Greenhill, Sara; Casal, Roberto F; Almeida, Francisco A; Wahidi, Momen M; Eapen, George A; Feller-Kopman, David; Morice, Rodolfo C; Benzaquen, Sadia; Tremblay, Alain; Simoff, Michael; [Rafeq, Samaan]
BACKGROUND: There is significant variation between physicians in terms of how they perform therapeutic bronchoscopy, but there are few data on whether these differences impact effectiveness. METHODS: This was a multicenter registry study of patients undergoing therapeutic bronchoscopy for malignant central airway obstruction. The primary outcome was technical success, defined as reopening the airway lumen to > 50% of normal. Secondary outcomes were dyspnea as measured by the Borg score and health-related quality of life (HRQOL) as measured by the SF-6D. RESULTS: Fifteen centers performed 1,115 procedures on 947 patients. Technical success was achieved in 93% of procedures. Center success rates ranged from 90% to 98% (P = .02). Endobronchial obstruction and stent placement were associated with success, whereas American Society of Anesthesiology (ASA) score > 3, renal failure, primary lung cancer, left mainstem disease, and tracheoesophageal fistula were associated with failure. Clinically significant improvements in dyspnea occurred in 90 of 187 patients measured (48%). Greater baseline dyspnea was associated with greater improvements in dyspnea, whereas smoking, having multiple cancers, and lobar obstruction were associated with smaller improvements. Clinically significant improvements in HRQOL occurred in 76 of 183 patients measured (42%). Greater baseline dyspnea was associated with greater improvements in HRQOL, and lobar obstruction was associated with smaller improvements. CONCLUSIONS: Technical success rates were high overall, with the highest success rates associated with stent placement and endobronchial obstruction. Therapeutic bronchoscopy should not be withheld from patients based solely on an assessment of risk, since patients with the most dyspnea and lowest functional status benefitted the most.
PMCID:4420181
PMID: 25358019
ISSN: 1931-3543
CID: 2527002
Results of the ASPIRE endoscopic lung volume reduction trial at study termination [Meeting Abstract]
Come, Carolyn; Abu-Hijleh, Muhanned; Berkowitz, David; Bezzi, Michela; Bhatt, Surya; Cases, Enrique; Chen, Alexander; Cooper, Christopher; Criner, Gerard; Dransfield, Mark; Flandes, Javier; Gildea, Thomas; Gotfried, Mark; Hogarth, Kyle; Kremer, Mordechai; Leeds, William; Liesching, Timothy; Marquette, Charles; Mularski, Richard; Pinto-Plata, Victor; Pritchett, Michael; Rafeq, Samaan; Rubio, Edmundo; Slebos, Dirk-Jan; Stratakos, Grigoris; Walsh, John; Washko, George; Wells, JMichael; Whitten, Patrick; Yusen, Roger; Zulueta, Javier
ISI:000209782501044
ISSN: 1399-3003
CID: 2507632
BRONCHIAL ASSOCIATED LYMPHOID TISSUE (BALT) LYMPHOMA - IS RITUXIMAB ALONE A VIABLE OPTION INSTEAD OF AGGRESSIVE LOCAL THERAPY AND HIGH DOSE CHEMOTHERAPY EVEN IN THE RELAPSED SETTING FOR THIS RATHER RARE ENTITY? [Meeting Abstract]
Sunkara, Rajitha; Lee, David; Schnieder, Douglas; Rafeq, Samaan; Chi, Dorcas
ISI:000339624904348
ISSN: 1556-1380
CID: 2507672
An Unusual Cause for Hypertensive Crisis After Cesarean Section [Meeting Abstract]
Raphael, Jonelle; Mittal, Anuj; Rafeq, Samaan
ISI:000326864001076
ISSN: 0012-3692
CID: 2507662
A Dual-Modality Ultrasound (EBUS and EUS) Approach to Diagnose Pulmonary Histoplasmosis [Meeting Abstract]
Mittal, Anuj; Raphael, Jonelle; Tsukada, Hisashi; Hoffner, Eileen; Rafeq, Samaan; Shah, Bhavesh; Kenney, Lawrence
ISI:000326864000181
ISSN: 0012-3692
CID: 2507652
Pharmacokinetics of Paclitaxel Delivery for the Airway by a New Endobronchial Drug Delivery Catheter: Experimental Study [Meeting Abstract]
Tsukada, Hisashi; Entcheva-Dimitrov, Plamena; Seward, Kirk; Rafeq, Samaan; Ernst, Armin
ISI:000326864000084
ISSN: 0012-3692
CID: 2507642
Macro and microscopic evaluation of paclitaxel delivery in the airway with a novel endobronchial injectable drug delivery catheter [Meeting Abstract]
Tsukada, Hisashi; Entcheva-Dimitrov, Plamena; Seward, Kirk; Rafeq, Samaan; Ernst, Armin
ISI:000209370403050
ISSN: 1399-3003
CID: 2507622
Pulmonary manifestations of relapsing polychondritis
Rafeq, Samaan; Trentham, David; Ernst, Armin
Relapsing polychondritis (RP) is a chronic multisystemic disease characterized by recurrent episodes of cartilage inflammation throughout the body. The lower respiratory tract is involved in 20% to 50% of patients and results in significant morbidity. Effective medical therapies and airway interventions are available in experienced centers; however, no single treatment is curative, and the prognosis of RP with airway disease remains overall guarded.
PMID: 20692543
ISSN: 1557-8216
CID: 2507612
Biomarkers in pulmonary arterial hypertension
Rafeq, S; Shah, A M; Preston, I R
Despite recent advances in medical treatment, pulmonary arterial hypertension (PAH) continues to be associated with high morbidity and mortality. While the diagnosis is established via a right heart catheterisation, current non-invasive measures of disease severity and response to treatment used in clinical practice are the 6-min walk distance and the World Health Organization functional class. Although both parameters correlate with disease severity and prognosis, they have significant limitations. A major shortcoming in assessing PAH is lack of standardised, non-invasive, objective parameters that function as biomarkers to help assess the severity and prognosis of disease and to follow patients' response to treatment. In this article, we will review current knowledge on potential biomarkers associated with diagnosis, prognosis and response to treatment of PAH. Most biomarkers are either being evaluated for potential use in clinical practice, or being used as research tools.
PMID: 19624798
ISSN: 1368-504x
CID: 2526982