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Environmental impact of colorectal cancer screening with colonoscopy and multi-target stool DNA (mt-sDNA) testing
Alcock, Rebecca; Shaukat, Aasma; Kisiel, John B; Hernandez, Lyndon V; Delarmente, Benjo A; Estes, Chris; Bartels, Jeff; Lester, Jason; Vahdat, Vahab; Limburg, Paul J; Fendrick, A Mark
The substantial carbon footprint imparted by medical services warrants increased attention to their environmental impact. National guideline organizations such as the US Preventive Services Task Force (USPSTF) recommend multiple modalities for average-risk colorectal cancer (CRC) screening with varying resource intensity. The aim of this study was to quantify the environmental burden for 2 of the most used CRC screening modalities, colonoscopy and the multi-target stool DNA (mt-sDNA) test. A validated CRC microsimulation model was used to estimate the number of screening and follow-up tests for a cohort of 1 million average-risk individuals who underwent screening between ages 45 and 75. Component resources used for mt-sDNA, including waste products, energy, and transportation for colonoscopy and mt-sDNA, were collected from January 1, 2023, to January 1, 2024, and converted to carbon-equivalent emissions. Resources used for colonoscopy were captured from the literature. Resources devoted to screening colonoscopy were substantially (59%) higher than those to mt-sDNA, even when including follow-up colonoscopy. Of note, follow-up colonoscopy accounted for the majority (64%) of total emissions for the mt-sDNA screening strategy. Compared with colonoscopy screening, mt-sDNA substantially reduces the carbon emissions attributable to population-level CRC screening. Environmental impact should be included as a factor when choosing among guideline-recommended CRC screening strategies.
PMCID:11897791
PMID: 40078452
ISSN: 2976-5390
CID: 5808632
Development of a prognostic risk model for colorectal cancer and association of the prognostic model with cancer stem cell and immune cell infiltration
Zhang, Jian; Ambe, Peter C; Shaukat, Aasma
BACKGROUND/UNASSIGNED:The development of a prognostic model for patients with colorectal cancer (CRC) can facilitate the assessment of patient survival and the effectiveness of clinical treatments. A reasonable prognostic model can provide a basis for individualized treatment, prognostic risk stratification, and subsequent therapy for CRC patients. The aim of our study was to construct a prognostic model for patients with CRC using sequencing data derived from The Cancer Genome Atlas (TCGA) database. METHODS/UNASSIGNED:Sequencing data of paracancerous tissues (n=51) and CRC samples (n=647) were downloaded from the TCGA database. Least absolute shrinkage and selection operator (LASSO) and Cox regression analyses were employed to identify prognostic factors. A restricted cubic spline (RCS) model was used to assess the nonlinear relationship between risk score and poor overall survival (OS). The Genomics of Drug Sensitivity in Cancer (GDSC) database was accessed to evaluate the correlation between the prognostic model's risk score and drug sensitivity. The single-sample gene set enrichment analysis (ssGSEA), estimate, and CIBERSORT algorithms were applied to quantify the association between prognostic genes and immune cell infiltration in CRC. RESULTS/UNASSIGNED:) (HR =1.55; 95% CI: 1.09-2.20; P=0.02) function as independent prognostic factors for CRC. Based on these six genes, the developed prognostic assessment model identified a strong association between high risk score and poor OS (HR =2.43; 95% CI: 1.67-3.53; P<0.001) in patients with CRC. Furthermore, the analysis revealed a nonlinear relationship (P<0.001) between continuous variation in risk score and the risk of poor OS. Additionally, specific genes included in the prognostic model were found to be strongly associated with cancer stem cell and immune cell infiltration in CRC. CONCLUSIONS/UNASSIGNED:We developed a prognostic risk model incorporating a six-gene panel for patients with CRC. Our analysis revealed a nonlinear relationship between this prognostic model and OS in patients with CRC. A high risk score was associated with poor prognosis, indicating that the adverse outcomes observed in patients with CRC may be influenced by cancer stem cell and immune cell infiltration. Our model provides a promising predictive method for the prognosis of CRC patients, but it still needs to be validated in a larger sample size.
PMCID:11921271
PMID: 40115909
ISSN: 2078-6891
CID: 5813712
Advanced Adenoma and Long-Term Risk of Colorectal Cancer, Cancer-Related Mortality, and Mortality
Shaukat, Aasma; Goffredo, Paolo; Wolf, Jack M; Rudser, Kyle; Church, Timothy R
PMCID:11826353
PMID: 39946134
ISSN: 2574-3805
CID: 5793812
Sex Differences in Long COVID
Shah, Dimpy P; Thaweethai, Tanayott; Karlson, Elizabeth W; Bonilla, Hector; Horne, Benjamin D; Mullington, Janet M; Wisnivesky, Juan P; Hornig, Mady; Shinnick, Daniel J; Klein, Jonathan D; Erdmann, Nathaniel B; Brosnahan, Shari B; Lee-Iannotti, Joyce K; Metz, Torri D; Maughan, Christine; Ofotokun, Ighovwerha; Reeder, Harrison T; Stiles, Lauren E; Shaukat, Aasma; Hess, Rachel; Ashktorab, Hassan; Bartram, Logan; Bassett, Ingrid V; Becker, Jacqueline H; Brim, Hassan; Charney, Alexander W; Chopra, Tananshi; Clifton, Rebecca G; Deeks, Steven G; Erlandson, Kristine M; Fierer, Daniel S; Flaherman, Valerie J; Fonseca, Vivian; Gander, Jennifer C; Hodder, Sally L; Jacoby, Vanessa L; Kotini-Shah, Pavitra; Krishnan, Jerry A; Kumar, Andre; Levy, Bruce D; Lieberman, David; Lin, Jenny J; Martin, Jeffrey N; McComsey, Grace A; Moukabary, Talal; Okumura, Megumi J; Peluso, Michael J; Rosen, Clifford J; Saade, George; Shah, Pankil K; Sherif, Zaki A; Taylor, Barbara S; Tuttle, Katherine R; Urdaneta, Alfredo E; Wallick, Julie A; Wiley, Zanthia; Zhang, David; Horwitz, Leora I; Foulkes, Andrea S; Singer, Nora G; ,
IMPORTANCE/UNASSIGNED:A substantial number of individuals worldwide experience long COVID, or post-COVID condition. Other postviral and autoimmune conditions have a female predominance, but whether the same is true for long COVID, especially within different subgroups, is uncertain. OBJECTIVE/UNASSIGNED:To evaluate sex differences in the risk of developing long COVID among adults with SARS-CoV-2 infection. DESIGN, SETTING, AND PARTICIPANTS/UNASSIGNED:This cohort study used data from the National Institutes of Health (NIH) Researching COVID to Enhance Recovery (RECOVER)-Adult cohort, which consists of individuals enrolled in and prospectively followed up at 83 sites in 33 US states plus Washington, DC, and Puerto Rico. Data were examined from all participants enrolled between October 29, 2021, and July 5, 2024, who had a qualifying study visit 6 months or more after their initial SARS-CoV-2 infection. EXPOSURE/UNASSIGNED:Self-reported sex (male, female) assigned at birth. MAIN OUTCOMES AND MEASURES/UNASSIGNED:Development of long COVID, measured using a self-reported symptom-based questionnaire and scoring guideline at the first study visit that occurred at least 6 months after infection. Propensity score matching was used to estimate risk ratios (RRs) and risk differences (95% CIs). The full model included demographic and clinical characteristics and social determinants of health, and the reduced model included only age, race, and ethnicity. RESULTS/UNASSIGNED:Among 12 276 participants who had experienced SARS-CoV-2 infection (8969 [73%] female; mean [SD] age at infection, 46 [15] years), female sex was associated with higher risk of long COVID in the primary full (RR, 1.31; 95% CI, 1.06-1.62) and reduced (RR, 1.44; 95% CI, 1.17-1.77) models. This finding was observed across all age groups except 18 to 39 years (RR, 1.04; 95% CI, 0.72-1.49). Female sex was associated with significantly higher overall long COVID risk when the analysis was restricted to nonpregnant participants (RR, 1.50; 95%: CI, 1.27-1.77). Among participants aged 40 to 54 years, the risk ratio was 1.42 (95% CI, 0.99-2.03) in menopausal female participants and 1.45 (95% CI, 1.15-1.83) in nonmenopausal female participants compared with male participants. CONCLUSIONS AND RELEVANCE/UNASSIGNED:In this prospective cohort study of the NIH RECOVER-Adult cohort, female sex was associated with an increased risk of long COVID compared with male sex, and this association was age, pregnancy, and menopausal status dependent. These findings highlight the need to identify biological mechanisms contributing to sex specificity to facilitate risk stratification, targeted drug development, and improved management of long COVID.
PMCID:11755195
PMID: 39841477
ISSN: 2574-3805
CID: 5778522
Increasing Colorectal Cancer Screening in an Urban Black Community: A Pilot Randomized Clinical Trial of Multilevel Interventions
Shaukat, Aasma; Das, Taranika Sarkar; Shahin, George; Hayes, Richard; Ahn, Jiyoung
PMID: 39630401
ISSN: 1573-2568
CID: 5804452
Risk of malnutrition increases in the year prior to surgery among patients with inflammatory bowel disease
Chaudhary, Vasantham; Chung, Frank R; Delau, Olivia; Dane, Bari; Levine, Irving; Meng, Xucong; Chodosh, Joshua; da Luz Moreira, Andre; Simon, Jessica N; Axelrad, Jordan E; Katz, Seymour; Dodson, John; Shaukat, Aasma; Faye, Adam S
BACKGROUND/UNASSIGNED:In patients with inflammatory bowel disease (IBD) who need intestinal resection, prior data suggest that earlier surgical intervention may be associated with improved outcomes. However, surgery is often deferred for additional trials of advanced therapies, which potentially shifts patients from a fit to a frail preoperative state. OBJECTIVES/UNASSIGNED:This study aimed to evaluate clinical changes that occur in the year prior to intestinal resection in patients with IBD. DESIGN/UNASSIGNED:Retrospective cohort study. METHODS/UNASSIGNED:This was a multi-hospital retrospective study of patients ⩾18 years old who underwent initial IBD-related intestinal resection between January 1, 2018 and May 31, 2023. Clinical characteristics and radiographical skeletal muscle mass were compared using the Wilcoxon Signed-Rank test for continuous variables and McNemar's test for categorical variables. RESULTS/UNASSIGNED: = 0.06). CONCLUSION/UNASSIGNED:In the 6-12 months prior to an IBD-related intestinal resection, as compared to the month prior, individuals were less likely to be malnourished, have an infection, or need hospitalization for IBD. This suggests that minimizing delays to surgery may lead to improved outcomes.
PMCID:12365438
PMID: 40842457
ISSN: 1756-283x
CID: 5909332
Advancing Health Equity Through Telehealth: A Systematic Review and Meta-analysis of Remote vs. In-person Weight-loss Interventions among Black Women with Obesity [Review]
Farooque, Umar; Murtaza, Meer; Umer, Muhammad; Johar, Ayesha; Aparna, Fnu; Khan, Aqsa Riaz; Kumar, Anish; Ahmed, Nazeer; Qadri, Syeda Hafsa; Idrees, Hiba; Ullah, Aman; Aliyeva, Turkan; Shaukat, Aasma
ISI:001596212800001
ISSN: 2162-4968
CID: 5966212
A Retrospective Cohort Propensity-Matched Analysis of Colorectal Cancer Risk in Isolated Small Intestinal Crohn's Disease
Alsakarneh, Saqr; Al Ta'ani, Omar; Quezada, Sandra; Raufman, Jean-Pierre; Shaukat, Aasma; Ghoz, Hassan
PMCID:12547917
PMID: 41142519
ISSN: 2772-5723
CID: 5960932
Pilot evaluation of a novel, automated ergonomics assessment tool
El Kurdi, Bara; Babar, Sumbal; Soroush, Ali; Bapaye, Jay; Wasserman, Reid D; Echavarria, Juan; Shahab, Omer; Locke, Cameron; Yang, Jamie; Koachman, Michael; Mönkemüller, Klaus; Shaukat, Aasma
BACKGROUND AND STUDY AIMS/UNASSIGNED:Gastroenterologists are prone to endoscopy-related musculoskeletal injuries (ERI). Current interventions lack real-time monitoring and feedback. ErgoGenius, a novel artificial intelligence computer-vision tool, addresses this gap by providing continuous posture assessment and feedback without wearable motion trackers. The aim of this study was to determine the feasibility of ErgoGenius, its accuracy compared with human appraisers, and its ability to detect abnormal posture. METHODS/UNASSIGNED:-test was used to compare REBA scores between bed positions. RESULTS/UNASSIGNED:= 0.006). CONCLUSIONS/UNASSIGNED:ErgoGenius was successfully deployed to detect abnormal postures related to changes in bed position and quantify ERI risk. It performed at par with human appraisers. This tool shows promise in enhancing ergonomic practices among gastroenterologists and trainees, potentially leading to better health outcomes and reduced injury.
PMCID:12080516
PMID: 40376029
ISSN: 2364-3722
CID: 5844692
Disparity in Access to Physicians With High Adenoma Detection Rates
Adenusi, Adedeji; Meng, Xucong; Bilal, Mohammad; Gross, Seth; Pochapin, Mark; Shaukat, Aasma
PMCID:12148723
PMID: 40496702
ISSN: 2772-5723
CID: 5869222