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Filling A Void: Creating a Systematic Approach to Examining Post Mortem Brains of Unexpected Child Deaths [Meeting Abstract]
Faustin, Arline; Reichard, Ross; Thomas, Cheddhi; Shepherd, Timothy; O'Connell, Brooke; Crandall, Laura; McGuone, Declan; William, Christopher; Snuderl, Matija; Wisniewski, Thomas; Devinsky, Orrin
ISI:000404906900140
ISSN: 1554-6578
CID: 2645132
A genome-wide analysis of rapidly progressive IDH-mutated astrocytomas [Meeting Abstract]
Richardson, Timothy; Snuderl, Matija; Serrano, Jonathan; Karajannis, Matthias; Heguy, Adriana; Oliver, Dwight; Raisanen, Jack; Maher, Elizabeth; Pan, Edward; Barnett, Samuel; Cai, Chunyu; Habib, Amyn; Bachoo, Robert; Hatanpaa, Kimmo
ISI:000404906900098
ISSN: 1554-6578
CID: 2645102
Global reduction in H3K27me3 is a molecular surrogate for pediatric posterior fossa- group A ependymomas [Meeting Abstract]
Panwalkar, Pooja; Clark, Jonathan; Ramaswamy, Vijay; Hawes, Debra; Yang, Fuseng; Dunham, Christopher; Yip, Stephen; Hukin, Juliette; Sun, Yilun; Schipper, Matthew; Margol, Ashley; Pekmezci, Melike; Chung, Chan; Banda, Adam; Curry, Sarah J; Santi, Mariarita; Rodriguez, Fausto; Snuderl, Matija; Saratsis, Amanda M; Horbinski, Craig; Kool, Marcel; Pfister, Stephan M; Taylor, Michael D; Hawkins, Cynthia; Korshunov, Andrey; Judkins, Alexander R; Venneti, Sriram
ISI:000404906900033
ISSN: 1554-6578
CID: 2645082
Primitive Neuroectodermal Tumors of the Female Genital Tract: A Morphologic, Immunohistochemical, and Molecular Study of 19 Cases
Chiang, Sarah; Snuderl, Matija; Kojiro-Sanada, Sakiko; Quer Pi-Sunyer, Ariadna; Daya, Dean; Hayashi, Tohru; Bosincu, Luisanna; Ogawa, Fumihiro; Rosenberg, Andrew E; Horn, Lars-Christian; Wang, Lu; Iafrate, A John; Oliva, Esther
Primary primitive neuroectodermal tumor (PNET) of the female genital tract is rare, and its proper classification remains unclear. The clinical, histologic, and immunophenotypic features as well as EWSR1 rearrangement status of 19 gynecologic PNETs, including 10 ovarian, 8 uterine, and 1 vulvar tumors, are herein reported. Patient age ranged from 12 to 68 years, with a median age of 20 and 51 years among those with ovarian and uterine PNETs, respectively. Morphologic features of central nervous system (CNS) tumors were seen in 15 PNETs, including 9 medulloblastomas, 3 ependymomas, 2 medulloepitheliomas, and 1 glioblastoma, consistent with central PNET. The remaining 4 PNETs were composed entirely of undifferentiated small round blue cells and were classified as Ewing sarcoma/peripheral PNET. Eight PNETs were associated with another tumor type, including 5 ovarian mature cystic teratomas, 2 endometrial low-grade endometrioid carcinomas, and a uterine carcinosarcoma. By immunohistochemistry, 17 PNETs expressed at least 1 marker of neuronal differentiation, including synaptophysin, NSE, CD56, S100, and chromogranin in 10, 8, 14, 8, and 1 tumors, respectively. GFAP was positive in 4 PNETs, all of which were of central type. Membranous CD99 and nuclear Fli-1 staining was seen in 10 and 16 tumors, respectively, and concurrent expression of both markers was seen in both central and Ewing sarcoma/peripheral PNETs. All tumors expressed vimentin, whereas keratin cocktail (CAM5.2, AE1/AE3) staining was only focally present in 4 PNETs. Fluorescence in situ hybridization was successful in all cases and confirmed EWSR1 rearrangement in 2 of 4 tumors demonstrating morphologic features of Ewing sarcoma/peripheral PNET and concurrent CD99 and Fli-1 expression. In conclusion, central and Ewing sarcoma/peripheral PNETs may be encountered in the female genital tract with central PNETs being more common. Central PNETs show a spectrum of morphologic features that overlaps with CNS tumors but lack EWSR1 rearrangements. GFAP expression supports a morphologic impression of central PNET and is absent in Ewing sarcoma/peripheral PNET. Ewing sarcoma/peripheral PNETs lack morphologic features of CNS tumors.
PMCID:5525138
PMID: 28296680
ISSN: 1532-0979
CID: 2489992
Mutant IDH1 and seizures in patients with glioma
Chen, Hao; Judkins, Jonathon; Thomas, Cheddhi; Wu, Meijing; Khoury, Laith; Benjamin, Carolina G; Pacione, Donato; Golfinos, John G; Kumthekar, Priya; Ghamsari, Farhad; Chen, Li; Lein, Pamela; Chetkovich, Dane M; Snuderl, Matija; Horbinski, Craig
OBJECTIVE: Because the d-2-hydroxyglutarate (D2HG) product of mutant isocitrate dehydrogenase 1 (IDH1mut) is released by tumor cells into the microenvironment and is structurally similar to the excitatory neurotransmitter glutamate, we sought to determine whether IDH1mut increases the risk of seizures in patients with glioma, and whether D2HG increases the electrical activity of neurons. METHODS: Three WHO grade II-IV glioma cohorts from separate institutions (total N = 712) were retrospectively assessed for the presence of preoperative seizures and tumor location, WHO grade, 1p/19q codeletion, and IDH1mut status. Rat cortical neurons were grown on microelectrode arrays, and their electrical activity was measured before and after treatment with exogenous D2HG, in the presence or absence of the selective NMDA antagonist, AP5. RESULTS: Preoperative seizures were observed in 18%-34% of IDH1 wild-type (IDH1wt) patients and in 59%-74% of IDH1mut patients (p < 0.001). Multivariable analysis, including WHO grade, 1p/19q codeletion, and temporal lobe location, showed that IDH1mut was an independent correlate with seizures (odds ratio 2.5, 95% confidence interval 1.6-3.9, p < 0.001). Exogenous D2HG increased the firing rate of cultured rat cortical neurons 4- to 6-fold, but was completely blocked by AP5. CONCLUSIONS: The D2HG product of IDH1mut may increase neuronal activity by mimicking the activity of glutamate on the NMDA receptor, and IDH1mut gliomas are more likely to cause seizures in patients. This has rapid translational implications for the personalized management of tumor-associated epilepsy, as targeted IDH1mut inhibitors may improve antiepileptic therapy in patients with IDH1mut gliomas.
PMCID:5419985
PMID: 28404805
ISSN: 1526-632x
CID: 2528312
Rapid progression to glioblastoma in a subset of IDH-mutated astrocytomas: a genome-wide analysis
Richardson, Timothy E; Snuderl, Matija; Serrano, Jonathan; Karajannis, Matthias A; Heguy, Adriana; Oliver, Dwight; Raisanen, Jack M; Maher, Elizabeth A; Pan, Edward; Barnett, Samuel; Cai, Chunyu; Habib, Amyn A; Bachoo, Robert M; Hatanpaa, Kimmo J
According to the recently updated World Health Organization (WHO) classification (2016), grade II-III astrocytomas are divided into IDH-wildtype and IDH-mutant groups, the latter being significantly less aggressive in terms of both progression-free and total survival. We identified a small cohort of WHO grade II-III astrocytomas that harbored the IDH1 R132H mutation, as confirmed by both immunohistochemistry and molecular sequence analysis, which nonetheless had unexpectedly rapid recurrence and subsequent progression to glioblastoma. Among these four cases, the mean time to recurrence as glioblastoma was only 16 months and the mean total survival among the three patients who have died during the follow-up was only 31 months. We hypothesized that these tumors had other, unfavorable genetic or epigenetic alterations that negated the favorable effect of the IDH mutation. We applied genome-wide profiling with a methylation array (Illumina Infinium Human Methylation 450k) to screen for genetic and epigenetic alterations in these tumors. As expected, the methylation profiles of all four tumors were found to match most closely with IDH-mutant astrocytomas. Compared with a control group of four indolent, age-similar WHO grade II-III astrocytomas, the tumors showed markedly increased levels of overall copy number changes, but no consistent specific genetic alterations were seen across all of the tumors. While most IDH-mutant WHO grade II-III astrocytomas are relatively indolent, a subset may rapidly recur and progress to glioblastoma. The precise underlying cause of the increased aggressiveness in these gliomas remains unknown, although it may be associated with increased genomic instability.
PMID: 28421459
ISSN: 1573-7373
CID: 2532622
Polymorphous low-grade neuroepithelial tumor of the young (PLNTY): an epileptogenic neoplasm with oligodendroglioma-like components, aberrant CD34 expression, and genetic alterations involving the MAP kinase pathway
Huse, Jason T; Snuderl, Matija; Jones, David T W; Brathwaite, Carole D; Altman, Nolan; Lavi, Ehud; Saffery, Richard; Sexton-Oates, Alexandra; Blumcke, Ingmar; Capper, David; Karajannis, Matthias A; Benayed, Ryma; Chavez, Lukas; Thomas, Cheddhi; Serrano, Jonathan; Borsu, Laetitia; Ladanyi, Marc; Rosenblum, Marc K
Epileptogenic tumors affecting children and young adults are a morphologically diverse collection of neuroepithelial neoplasms that, as a group, exhibit varying levels of glial and/or neuronal differentiation. Recent advances in molecular profiling technology, including comprehensive DNA sequencing and methylation analysis, have enabled the application of more precise and biologically relevant classification schemes to these tumors. In this report, we describe a morphologically and molecularly distinct epileptogenic neoplasm, the polymorphous low-grade neuroepithelial tumor of the young (PLNTY), which likely accounts for a sizable portion of oligodendroglioma-like tumors affecting the pediatric population. Characteristic microscopic findings most notably include infiltrative growth, the invariable presence of oligodendroglioma-like cellular components, and intense immunolabeling for cluster of differentiation 34 (CD34). Moreover, integrative molecular profiling reveals a distinct DNA methylation signature for PLNTYs, along with frequent genetic abnormalities involving either B-Raf proto-oncogene (BRAF) or fibroblast growth factor receptors 2 and 3 (FGFR2, FGFR3). These findings suggest that PLNTY represents a distinct biological entity within the larger spectrum of pediatric, low-grade neuroepithelial tumors.
PMCID:5325850
PMID: 27812792
ISSN: 1432-0533
CID: 2297452
Live Digital Telepathology Enables Rapid Remote Frozen Section Diagnosis and Cytology Adequacy Assessment by Subspecialists [Meeting Abstract]
Kane, Yehonatan; Darvishian, Farbod; Deng, Fang-Ming; Moreira, Andre L; Simsir, Aylin; William, Christopher; Snuderl, Matija
ISI:000393724402076
ISSN: 1530-0307
CID: 2506802
Genome-Wide DNA Methylation Profiling in the Diagnosis of Pediatric Ewing Sarcoma, Osteosarcoma, and Synovial Sarcoma [Meeting Abstract]
Bu, Fang; Cooper, Benjamin; Wu, Peter; Ladanyi, Marc; Gorlick, Richard G; Karajannis, Matthias; Thomas, Kristen M; Snuderl, Matija
ISI:000393724402348
ISSN: 1530-0307
CID: 2506822
Whole Transcriptome Analysis Identifies Upregulated Genes and Pathways Differentially Expressed in Ductal Carcinoma In Situ Mimicking Usual Ductal Hyperplasia [Meeting Abstract]
Zeng, Jennifer; Serrano, Jonathan; Snuderl, Matija; Darvishian, Farbod
ISI:000393724400306
ISSN: 1530-0307
CID: 2506592