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Connection and Deformation of Pathological Images via a Macro Image for Comparing Different Modality Images of Brain Tumor
Ohnishi, Takashi; Tanaka, Takuya; Nakamura, Yuka; Hashimoto, Noriaki; Haneishi, Hideaki; Taylor, Jennie; Snuderl, Matija; Yagi, Yukako
ISI:000345418000001
ISSN: 2210-7185
CID: 1878512
INCREASED PERFUSION DUE TO VASCULAR NORMALIZATION IMPROVES OXYGENATION AND SURVIVAL IN GLIOBLASTOMA PATIENTS TREATED WITH CEDIRANIB WITH OR WITHOUT CHEMORADIATION [Meeting Abstract]
Batchelor, Tracy T; Gerstner, Elizabeth R; Emblem, Kyrre E; Duda, Dan G; Kalpathy-Cramer, Jayashree; Snuderl, Matija; Ancukiewicz, Marek; Polaskova, Pavlina; Pinho, Marco C; Jennings, Dominique; Plotkin, Scott R; Chi, Andrew S; Eichler, April F; Dietrich, Jorg; Hochberg, Fred H; Lu-Emerson, Christine; Iafrate, AJohn; Ivy, SPercy; Rosen, Bruce; Loeffler, Jay S; Wen, Patrick Y; Sorensen, AGreg; Jain, Rakesh K
ISI:000344236400043
ISSN: 1523-5866
CID: 1878502
Comparative evaluation of methylene blue and demeclocycline for enhancing optical contrast of gliomas in optical images
Wirth, Dennis; Snuderl, Matija; Curry, William; Yaroslavsky, Anna
PMID: 25239672
ISSN: 1083-3668
CID: 1252432
Merlin/NF2 Loss-Driven Tumorigenesis Linked to CRL4(DCAF1)-Mediated Inhibition of the Hippo Pathway Kinases Lats1 and 2 in the Nucleus
Li, Wei; Cooper, Jonathan; Zhou, Lu; Yang, Chenyi; Erdjument-Bromage, Hediye; Zagzag, David; Snuderl, Matija; Ladanyi, Marc; Hanemann, C Oliver; Zhou, Pengbo; Karajannis, Matthias A; Giancotti, Filippo G
It is currently unclear whether Merlin/NF2 suppresses tumorigenesis by activating upstream components of the Hippo pathway at the plasma membrane or by inhibiting the E3 ubiquitin ligase CRL4(DCAF1) in the nucleus. We found that derepressed CRL4(DCAF1) promotes YAP- and TEAD-dependent transcription by ubiquitylating and, thereby, inhibiting Lats1 and 2 in the nucleus. Genetic epistasis experiments and analysis of tumor-derived missense mutations indicate that this signaling connection sustains the oncogenicity of Merlin-deficient tumor cells. Analysis of clinical samples confirms that this pathway operates in NF2-mutant tumors. We conclude that derepressed CRL4(DCAF1) promotes activation of YAP by inhibiting Lats1 and 2 in the nucleus.
PMCID:4126592
PMID: 25026211
ISSN: 1535-6108
CID: 1070952
Hypermutable DNA chronicles the evolution of human colon cancer
Naxerova, Kamila; Brachtel, Elena; Salk, Jesse J; Seese, Aaron M; Power, Karen; Abbasi, Bardia; Snuderl, Matija; Chiang, Sarah; Kasif, Simon; Jain, Rakesh K
Intratumor genetic heterogeneity reflects the evolutionary history of a cancer and is thought to influence treatment outcomes. Here we report that a simple PCR-based assay interrogating somatic variation in hypermutable polyguanine (poly-G) repeats can provide a rapid and reliable assessment of mitotic history and clonal architecture in human cancer. We use poly-G repeat genotyping to study the evolution of colon carcinoma. In a cohort of 22 patients, we detect poly-G variants in 91% of tumors. Patient age is positively correlated with somatic mutation frequency, suggesting that some poly-G variants accumulate before the onset of carcinogenesis during normal division in colonic stem cells. Poorly differentiated tumors have fewer mutations than well-differentiated tumors, possibly indicating a shorter mitotic history of the founder cell in these cancers. We generate poly-G mutation profiles of spatially separated samples from primary carcinomas and matched metastases to build well-supported phylogenetic trees that illuminate individual patients' path of metastatic progression. Our results show varying degrees of intratumor heterogeneity among patients. Finally, we show that poly-G mutations can be found in other cancers than colon carcinoma. Our approach can generate reliable maps of intratumor heterogeneity in large numbers of patients with minimal time and cost expenditure.
PMCID:4020055
PMID: 24753616
ISSN: 0027-8424
CID: 909082
Toward High-Resolution Whole Organ Histology 3D Model Development [Meeting Abstract]
Hashimoto, N.; Taylor, J.; Tanaka, T.; Bautista, P. A.; Snuderl, M.; Yagi, Y.
ISI:000331155802192
ISSN: 0023-6837
CID: 855362
Toward High-Resolution Whole Organ Histology 3D Model Development [Meeting Abstract]
Hashimoto, N.; Taylor, J.; Tanaka, T.; Bautista, P. A.; Snuderl, M.; Yagi, Y.
ISI:000331502202192
ISSN: 0893-3952
CID: 855342
PLACENTAL GROWTH FACTOR/NEUROPILIN 1 SIGNALING IS A THERAPEUTIC TARGET IN PEDIATRIC MEDULLOBLASTOMA [Meeting Abstract]
Snuderl, Matija; Batista, Ana; Kirkpatrick, Nathaniel; de Almodovar, Carmen Ruiz; Riedemann, Lars; Knevels, Ellen; Schmidt, Thomas; Peterson, Teresa; Roberge, Sylvie; Bais, Carlos; Yip, Stephen; Hasselblatt, Martin; Rossig, Claudia; Ferrara, Napoleone; Klagsbrun, Michael; Duda, Dan; Fukumura, Dai; Xu, Lei; Carmeliet, Peter; Jain, Rakesh
ISI:000318570500071
ISSN: 1522-8517
CID: 3318272
Clinical features of brain metastasis from salivary gland tumors
Venteicher, Andrew S; Walcott, Brian P; Sheth, Sameer A; Snuderl, Matija; Patel, Anoop P; Curry, William T; Nahed, Brian V
Salivary gland tumors comprise a group of 24 tumor subtypes with a wide range of clinical behaviors and propensities for metastasis. Several prognostic factors have been identified that help predict the development of systemic metastases, most commonly to the lung, liver, or bone. Metastases to the brain are rare. To better understand the behavior of salivary gland tumors that metastasise to the brain, we performed a retrospective cohort analysis on a series of patients to highlight features of their medical and surgical management. From 2007 to 2011, a database of 4117 elective craniotomies were queried at a single institution to identify patients surgically treated for salivary gland metastases to the brain. Three patients were identified. Histologic subtypes included salivary duct carcinoma, poorly differentiated carcinoma, and papillary mucinous adenocarcinoma. They had all undergone previous treatment for their primary malignancy. The mean time to intracranial metastasis was 48 months from initial diagnosis (range, 14-91 months). Treatment for intracranial metastases included surgical resection, whole brain radiation, stereotactic radiosurgery, and chemotherapy. Intracranial metastases from salivary gland tumors are rare, present years after diagnosis of the primary tumor, and are treatable with multimodality therapy.
PMCID:3749258
PMID: 23685104
ISSN: 0967-5868
CID: 909042
Increase in tumor-associated macrophages after antiangiogenic therapy is associated with poor survival among patients with recurrent glioblastoma
Lu-Emerson, Christine; Snuderl, Matija; Kirkpatrick, Nathaniel D; Goveia, Jermaine; Davidson, Christian; Huang, Yuhui; Riedemann, Lars; Taylor, Jennie; Ivy, Percy; Duda, Dan G; Ancukiewicz, Marek; Plotkin, Scott R; Chi, Andrew S; Gerstner, Elizabeth R; Eichler, April F; Dietrich, Jorg; Stemmer-Rachamimov, Anat O; Batchelor, Tracy T; Jain, Rakesh K
Antiangiogenic therapy is associated with increased radiographic responses in glioblastomas, but tumors invariably recur. Because tumor-associated macrophages have been shown to mediate escape from antiangiogenic therapy in preclinical models, we examined the role of macrophages in patients with recurrent glioblastoma. We compared autopsy brain specimens from 20 patients with recurrent glioblastoma who received antiangiogenic treatment and chemoradiation with 8 patients who received chemotherapy and/or radiotherapy without antiangiogenic therapy or no treatment. Tumor-associated macrophages were morphologically and phenotypically analyzed using flow cytometry and immunohistochemistry for CD68, CD14, CD163, and CD11b expression. Flow cytometry showed an increase in macrophages in the antiangiogenic-treated patients. Immunohistochemical analysis demonstrated an increase in CD68+ macrophages in the tumor bulk (P < .01) and infiltrative areas (P = .02) in antiangiogenic-treated patients. We also observed an increase in CD11b+ cells in the tumor bulk (P < .01) and an increase in CD163+ macrophages in infiltrative tumor (P = .02). Of note, an increased number of CD11b+ cells in bulk and infiltrative tumors (P = .05 and P = .05, respectively) correlated with poor overall survival among patients who first received antiangiogenic therapy at recurrence. In summary, recurrent glioblastomas showed an increased infiltration in myeloid populations in the tumor bulk and in the infiltrative regions after antiangiogenic therapy. Higher numbers of CD11b+ cells correlated with poor survival among these patients. These data suggest that tumor-associated macrophages may participate in escape from antiangiogenic therapy and may represent a potential biomarker of resistance and a potential therapeutic target in recurrent glioblastoma.
PMCID:3714160
PMID: 23828240
ISSN: 1522-8517
CID: 909052