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GRASP-Pro: imProving GRASP DCE-MRI through self-calibrating subspace-modeling and contrast phase automation

Feng, Li; Wen, Qiuting; Huang, Chenchan; Tong, Angela; Liu, Fang; Chandarana, Hersh
PURPOSE/OBJECTIVE:To propose a highly accelerated, high-resolution dynamic contrast-enhanced MRI (DCE-MRI) technique called GRASP-Pro (golden-angle radial sparse parallel imaging with imProved performance) through a joint sparsity and self-calibrating subspace constraint with automated selection of contrast phases. METHODS:GRASP-Pro reconstruction enforces a combination of an explicit low-rank subspace-constraint and a temporal sparsity constraint. The temporal basis used to construct the subspace is learned from an intermediate reconstruction step using the low-resolution portion of radial k-space, which eliminates the need for generating the basis using auxiliary data or a physical signal model. A convolutional neural network was trained to generate the contrast enhancement curve in the artery, from which clinically relevant contrast phases are automatically selected for evaluation. The performance of GRASP-Pro was demonstrated for high spatiotemporal resolution DCE-MRI of the prostate and was compared against standard GRASP in terms of overall image quality, image sharpness, and residual streaks and/or noise level. RESULTS:Compared to GRASP, GRASP-Pro reconstructed dynamic images with enhanced sharpness, less residual streaks and/or noise, and finer delineation of the prostate without prolonging reconstruction time. The image quality improvement reached statistical significance (P < 0.05) in all the assessment categories. The neural network successfully generated contrast enhancement curves in the artery, and corresponding peak enhancement indexes correlated well with that from the manual selection. CONCLUSION/CONCLUSIONS:GRASP-Pro is a promising method for rapid and continuous DCE-MRI. It enables superior reconstruction performance over standard GRASP and allows reliable generation of artery enhancement curve to guide the selection of desired contrast phases for improving the efficiency of GRASP MRI workflow.
PMID: 31400028
ISSN: 1522-2594
CID: 4034522

Consensus report from the 8th International Forum for Liver Magnetic Resonance Imaging

Zech, Christoph J; Ba-Ssalamah, Ahmed; Berg, Thomas; Chandarana, Hersh; Chau, Gar-Yang; Grazioli, Luigi; Kim, Myeong-Jin; Lee, Jeong Min; Merkle, Elmar M; Murakami, Takamichi; Ricke, Jens; B Sirlin, Claude; Song, Bin; Taouli, Bachir; Yoshimitsu, Kengo; Koh, Dow-Mu
OBJECTIVES/OBJECTIVE:The 8th International Forum for Liver Magnetic Resonance Imaging (MRI), held in Basel, Switzerland, in October 2017, brought together clinical and academic radiologists from around the world to discuss developments in and reach consensus on key issues in the field of gadoxetic acid-enhanced liver MRI since the previous Forum held in 2013. METHODS:Two main themes in liver MRI were considered in detail at the Forum: the use of gadoxetic acid for contrast-enhanced MRI in patients with liver cirrhosis and the technical performance of gadoxetic acid-enhanced liver MRI, both opportunities and challenges. This article summarises the expert presentations and the delegate voting on consensus statements discussed at the Forum. RESULTS AND CONCLUSIONS/CONCLUSIONS:It was concluded that gadoxetic acid-enhanced MRI has higher sensitivity for the diagnosis of hepatocellular carcinoma (HCC), when compared with multidetector CT, by utilising features of hyperenhancement in the arterial phase and hypointensity in the hepatobiliary phase (HBP). Recent HCC management guidelines recognise an increasing role for gadoxetic acid-enhanced MRI in early diagnosis and monitoring post-resection. Additional research is needed to define the role of HBP in predicting microvascular invasion, to better define washout during the transitional phase in gadoxetic acid-enhanced MRI for HCC diagnosis, and to reduce the artefacts encountered in the arterial phase. Technical developments are being directed to shortening the MRI protocol for reducing time and patient discomfort and toward utilising faster imaging and non-Cartesian free-breathing approaches that have the potential to improve multiphasic dynamic imaging. KEY POINTS/CONCLUSIONS:• Gadoxetic acid-enhanced MRI provides higher diagnostic sensitivity than CT for diagnosing HCC. • Gadoxetic acid-enhanced MRI has roles in early-HCC diagnosis and monitoring post-resection response. • Faster imaging and free-breathing approaches have potential to improve multiphasic dynamic imaging.
PMID: 31385048
ISSN: 1432-1084
CID: 4033062

Pancreas deformation in the presence of tumors using feature tracking from free-breathing XD-GRASP MRI

Chitiboi, Teodora; Muckley, Matthew; Dane, Bari; Huang, Chenchan; Feng, Li; Chandarana, Hersh
BACKGROUND:Quantifying the biomechanical properties of pancreatic tumors could potentially help with assessment of tumor aggressiveness, prognosis, and prediction of therapy response. PURPOSE/OBJECTIVE:To quantify respiratory-induced deformation in the pancreas and pancreatic lesions using XD-GRASP (eXtra-Dimensional Golden-angle RAdial Sparse Parallel), MRI. STUDY TYPE/METHODS:W) imaging were studied. SUBJECTS/METHODS:Thirty-two patients (12 male and 20 female) including nine with pancreatic lesions constituted our study cohort. FIELD STRENGTH/SEQUENCE/UNASSIGNED:WI contrast-enhanced gradient echo radial free-breathing acquisition. ASSESSMENT/RESULTS:Using the XD-GRASP imaging technique, the acquired free-breathing radial data were sorted and binned into 10 consecutive respiratory motion states that were jointly reconstructed. 3D deformation fields along the respiratory dimension were computed using an optical flow method and were analyzed in the pancreas. STATISTICAL TESTS/UNASSIGNED:The Wilcoxon signed-rank test was used to assess the difference in average displacement across pancreatic regions, while the Wilcoxon rank-sum test was used for displacement differences between patients with and without tumors. The interclass correlation coefficient (ICC) was computed to assess consistency between observers for each image quality measure. RESULTS:There was a significantly larger displacement in the pancreatic tail compared with the head (8.2 ± 3.7 mm > 5.8 ± 2.4 mm; P < 0.001) and body regions (8.2 ± 3.7 mm > 6.6 ± 2.9 mm; P < 0.001). Furthermore, there was reduced normalized average displacement in patients with pancreatic lesions compared with subjects without lesions (0.33 ± 0.1 < 0.69 ± 0.26, P < 0.001 for the head; 0.30 ± 0.1 < 0.84 ± 0.31, P < 0.001 for the body; and 0.44 ± 0.31 < 1.08 ± 0.53, P < 0.001 for the tail, respectively). DATA CONCLUSION/UNASSIGNED:Free-breathing respiratory motion-sorted XD-GRASP MRI has the potential to noninvasively characterize the biomechanical properties of the pancreas by quantifying breathing-induced mechanical displacement. LEVEL OF EVIDENCE/METHODS:4 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2019.
PMID: 30854767
ISSN: 1522-2586
CID: 3732932

Differential diagnosis of renal tumours [Meeting Abstract]

Chandarana, H
Incidence of kidney cancer is steadily rising likely due to incidental detection of small renal masses. Nearly 20% of all small renal masses (less than 4cm in size) are benign at pathology. Furthermore, these small renal cancers represents 70% of all newly diagnosed Renal Cell Cancers (RCC). Detection of small renal masses leads to management dilemma, as it is not always possible to characterise these lesions on conventional imaging. Inability to discriminate benign from malignant and indolent from aggressive tumour results in surgical treatment for many of these patients. Surgery provides excellent oncologic control but it is associated with increased morbidity. Treatment based on tumour aggressiveness will result in optimal outcome by selecting patients with aggressive tumour for surgery and avoiding unnecessary surgery in indolent tumours. Such a paradigm requires non-invasive methods to accurately diagnose tumours of different aggressiveness. Tumours of different histopathology differ in tumour aggressiveness. Imaging can help investigate renal tumour histopathology and aggressiveness and can impact treatment decision and lower treatment cost. Imaging can assist with: (A). Differentiating benign renal masses from malignant tumours. - Protenacious or hemorrhagic cysts are hyperdense on CT and T1 hyperintense on MRI. Differentiating these lesions from solid masses requires assessment of enhancement. To assess for enhancement we can obtain pre-and post-contrast imaging on CT or MRI. Dual energy CT permits a single phase CT imaging to assess for enhancement, thus decreasing radiation dose. Subtraction imaging on MRI is useful to assess for enhancement. - Benign angiomyolipoma (AML) contain bulk fat. This can be easily diagnosed on CT and MRI. - Lipid poor AML can be difficult to differentiate from other types of renal masses on CT imaging. MRI can be helpful in suggesting the diagnosis of lipid poor AML. Some of the MRI features that suggest diagnosis of AML include homogenous and uniform enhancement, homogenous T2 signal similar to that of muscle, and restricted diffusion with low ADC. Suggesting this diagnosis is important as diagnosis of lipid poor AML can be made confidently at core biopsy, thus avoiding surgery in these patients - It is nearly impossible to discriminate benign oncocytoma from chromophobe and clear cell subtypes of kidney cancers on conventional imaging. However, diffusion weighted imaging (DWI) and perfusion weighted imaging (PWI) has shown some promise in small pilot studies. (B). Tumour subtypes of solid R
EMBASE:629440532
ISSN: 1470-7330
CID: 4119162

Detection of hepatic steatosis and iron content at 3 Tesla: comparison of two-point Dixon, quantitative multi-echo Dixon, and MR spectroscopy

Zhan, Chenyang; Olsen, Sonja; Zhang, Hoi Cheung; Kannengiesser, Stephan; Chandarana, Hersh; Shanbhogue, Krishna Prasad
PURPOSE/OBJECTIVE:To compare qualitative results obtained from computer-aided dual-ratio analysis on T1-weighted two-point Dixon, with T2*-corrected multi-echo Dixon and T2-corrected multi-echo single-voxel MR spectroscopy sequence (MRS) for evaluation of liver fat and iron at 3T. METHODS AND MATERIALS/METHODS:This retrospective, HIPAA-compliant, IRB-approved study included 479 patients with known or suspected liver disease. Two-point Dixon, multi-echo Dixon, and MR spectroscopy sequences were performed for each patient at 3T. A receiver-operating characteristic analysis was performed to compare the diagnostic performance in 80 patients using biopsy as the standard. Sensitivity, specificity, PPV, and NPV of qualitative two-point Dixon results, multi-echo Dixon (PDFF and R2*), and MRS (fat fraction and R2 water) for detection of hepatic steatosis and siderosis were assessed. RESULTS:, respectively. CONCLUSION/CONCLUSIONS:The computer-aided dual-ratio discrimination with two-point Dixon is a useful qualitative screening tool with high negative predictive value for hepatic steatosis and iron overload. Multi-echo Dixon and MRS have similar accuracy for detection of hepatic steatosis and iron overload at 3 Tesla.
PMID: 31286208
ISSN: 2366-0058
CID: 3976472

"Pin the Tumor on the Kidney:" An Evaluation of how Surgeons Translate CT and MRI data to 3D Models

Wake, Nicole; Wysock, James S; Bjurlin, Marc A; Chandarana, Hersh; William, C Huang
OBJECTIVE:To quantify how surgeons translate two-dimensional (2D) CT or MRI data to a three-dimensional (3D) model and evaluate if 3D printed models improve tumor localization. MATERIALS AND METHODS/METHODS:Twenty patients with renal masses were randomly selected from our IRB approved prospective 3D modeling study. Three surgeons reviewed the clinically available CT or MRI data; and using computer-aided design (CAD) software, translated the renal tumor to the position on the kidney that corresponded with the image interpretation. The renal tumor location determined by each surgeon was compared to the true renal mass location determined by the segmented imaging data and the Dice Similarity Coefficient (DSC) was calculated to evaluate the spatial overlap accuracy. The exercise was repeated for a subset of patients with a 3D printed model. RESULTS:The mean DSC was 0.243 ± 0.236 for the entire cohort (n=60). There was no overlap between the actual renal tumor and renal tumor identified by the surgeons in 16/60 cases (26.67%). Seven cases were reviewed again by two surgeons in a different setting with a 3D printed renal cancer model. For these cases, the DSC improved from 0.277 ± 0.248 using imaging only to 0.796 ± 0.090 with the 3D printed model (p < 0.01). CONCLUSIONS:In this study, cognitive renal tumor localization based on CT and MRI data was poor. This study demonstrates that experienced surgeons cannot always translate 2D imaging studies into 3D. Furthermore, 3D printed models can improve tumor localization and potentially assist with appropriate surgical approach.
PMID: 31233814
ISSN: 1527-9995
CID: 3955222

Bosniak Classification of Cystic Renal Masses, Version 2019: An Update Proposal and Needs Assessment

Silverman, Stuart G; Pedrosa, Ivan; Ellis, James H; Hindman, Nicole M; Schieda, Nicola; Smith, Andrew D; Remer, Erick M; Shinagare, Atul B; Curci, Nicole E; Raman, Steven S; Wells, Shane A; Kaffenberger, Samuel D; Wang, Zhen J; Chandarana, Hersh; Davenport, Matthew S
Cystic renal cell carcinoma (RCC) is almost certainly overdiagnosed and overtreated. Efforts to diagnose and treat RCC at a curable stage result in many benign neoplasms and indolent cancers being resected without clear benefit. This is especially true for cystic masses, which compared with solid masses are more likely to be benign and, when malignant, less aggressive. For more than 30 years, the Bosniak classification has been used to stratify the risk of malignancy in cystic renal masses. Although it is widely used and still effective, the classification does not formally incorporate masses identified at MRI or US or masses that are incompletely characterized but are highly likely to be benign, and it is affected by interreader variability and variable reported malignancy rates. The Bosniak classification system cannot fully differentiate aggressive from indolent cancers and results in many benign masses being resected. This proposed update to the Bosniak classification addresses some of these shortcomings. The primary modifications incorporate MRI, establish definitions for previously vague imaging terms, and enable a greater proportion of masses to enter lower-risk classes. Although the update will require validation, it aims to expand the number of cystic masses to which the Bosniak classification can be applied while improving its precision and accuracy for the likelihood of cancer in each class.
PMID: 31210616
ISSN: 1527-1315
CID: 3939062

MR elastography of liver at 3 Tesla: comparison of gradient-recalled echo (GRE) and spin-echo (SE) echo-planar imaging (EPI) sequences and agreement across stiffness measurements

Zhan, Chenyang; Kannengiesser, Stephan; Chandarana, Hersh; Fenchel, Matthias; Ream, Justin; Shanbhogue, Krishna Prasad
PURPOSE/OBJECTIVE:To compare 2D gradient-recalled echo (GRE) and 2D spin-echo (SE) echo-planar imaging (EPI) MR elastography (MRE) for measurement of hepatic stiffness in adult patients with known or suspected liver disease at 3 Tesla. MATERIALS AND METHODS/METHODS:Three hundred and eighty-seven consecutive patients underwent MRE of the liver at 3 Tesla with 2D-GRE and 2D-SE-EPI sequences. 'Mean liver stiffness (LS)' calculated by averaging 3 ROIs in the right lobe, 'Maximum LS' calculated by an ROI in the right lobe; and 'Freehand LS' calculated by an ROI in the entire liver were measured by two independent readers. Inter-observer and inter-class variability in stiffness measurements were assessed. Stiffness values were correlated with degree of liver fibrosis (METAVIR scores) in 97 patients who underwent biopsy. The diagnostic performance was compared by a receiver-operating characteristic analysis. RESULTS:indicating iron overload). There is high reproducibility for both GRE and SE-EPI variants (ICC = 0.84-0.94 for both GRE and SE-EPI MRE). The highest sensitivity, specificity, and accuracy of differentiating mild fibrosis (F0-F2) from advanced fibrosis (F3-F4) are 0.84 (GRE Freehand measurement), 0.92 (GRE Maximum stiffness measurement), and 0.88 (GRE Freehand measurement), respectively. CONCLUSIONS:High intra-class correlation and intra-reader correlation are seen on measured hepatic stiffness for both 2D-GRE and 2D-SE-EPI MRE. 2D-SE-EPI has lower failure rate. Diagnostic performance of both sequences is equivalent, with highest sensitivity for 2D-GRE Freehand stiffness measurement, and highest specificity 2D-GRE Maximum stiffness measurement.
PMID: 30796479
ISSN: 2366-0058
CID: 3688102

Bosniak IIF and III Renal Cysts: Can Apparent Diffusion Coefficient-Derived Texture Features Discriminate Between Malignant and Benign IIF and III Cysts?

Gillingham, Nicolas; Chandarana, Hersh; Kamath, Amita; Shaish, Hiram; Hindman, Nicole
OBJECTIVE:The aim of this study was to determine which apparent diffusion coefficient-derived texture features are associated with malignancy in Bosniak IIF and III renal cystic lesions. METHODS:Twenty benign and 7 malignant Bosniak IIF (22) or III (5) renal cysts, as evaluated with magnetic resonance imaging, were assessed for progression to pathology-confirmed malignancy. Whole-cyst volumes of interest were manually segmented from apparent diffusion coefficient maps. Texture features were extracted from each volume of interest, including first-order histogram-based features and higher-order features, and data were analyzed with the Mann-Whitney U test to predict malignant progression. RESULTS:Eleven of 17 first-order features were significantly greater in benign compared with malignant cysts. Eight higher-order gray-level co-occurrence matrix (GLCM) texture features were significantly different between groups, 5 of which were greater in the benign population. CONCLUSIONS:Apparent diffusion coefficient-derived texture measures may help differentiate between benign and malignant Bosniak IIF and III cysts.
PMID: 30801565
ISSN: 1532-3145
CID: 3698222

Renal and adrenal masses containing fat at MRI: Proposed nomenclature by the society of abdominal radiology disease-focused panel on renal cell carcinoma

Schieda, Nicola; Davenport, Matthew S; Pedrosa, Ivan; Shinagare, Atul; Chandarana, Hersch; Curci, Nicole; Doshi, Ankur; Israel, Gary; Remer, Erick; Wang, Jane; Silverman, Stuart G
This article proposes a consensus nomenclature for fat-containing renal and adrenal masses at MRI to reduce variability, improve understanding, and enhance communication when describing imaging findings. The MRI appearance of "macroscopic fat" occurs due to a sufficient number of aggregated adipocytes and results in one or more of: 1) intratumoral signal intensity (SI) loss using fat-suppression techniques, or 2) chemical shift artifact of the second kind causing linear or curvilinear India-ink (etching) artifact within or at the periphery of a mass at macroscopic fat-water interfaces. "Macroscopic fat" is most commonly observed in adrenal myelolipoma and renal angiomyolipoma (AML) and only rarely encountered in other adrenal cortical tumors and renal cell carcinomas (RCC). Nonlinear noncurvilinear signal intensity loss on opposed-phase (OP) compared with in-phase (IP) chemical shift MRI (CSI) may be referred to as "microscopic fat" and is due to: a) an insufficient amount of adipocytes, or b) the presence of fat within tumor cells. Determining whether the signal intensity loss observed on CSI is due to insufficient adipocytes or fat within tumor cells cannot be accomplished using CSI alone; however, it can be inferred when other imaging features strongly suggest a particular diagnosis. Fat-poor AML are homogeneously hypointense on T2 -weighted (T2 W) imaging and avidly enhancing; signal intensity loss at OP CSI is uncommon, but when present is usually focal and is caused by an insufficient number of adipocytes within adjacent voxels. Conversely, clear-cell RCC are heterogeneously hyperintense on T2 W imaging and avidly enhancing, with the signal intensity loss observed on OP CSI being typically diffuse and due to fat within tumor cells. Adrenal adenomas, adrenal cortical carcinoma, and adrenal metastases from fat-containing primary malignancies also show signal intensity loss on OP CSI due to fat within tumor cells and not from intratumoral adipocytes. Level of Evidence: 5 Technical Efficacy Stage: 3 J. Magn. Reson. Imaging 2019.
PMID: 30693607
ISSN: 1522-2586
CID: 3626532