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Extent of Surgical Resection in Lower-Grade Gliomas: Differential Impact Based on Molecular Subtype
Patel, S H; Bansal, A G; Young, E B; Batchala, P P; Patrie, J T; Lopes, M B; Jain, R; Fadul, C E; Schiff, D
BACKGROUND AND PURPOSE/OBJECTIVE:Diffuse lower-grade gliomas are classified into prognostically meaningful molecular subtypes. We aimed to determine the impact of surgical resection on overall survival in lower-grade glioma molecular subtypes. MATERIALS AND METHODS/METHODS:) and 1p/19q status, after adjustment for age, sex, World Health Organization grade, chemotherapy administration, and radiation therapy administration. RESULTS:-wild-type lower-grade gliomas, pre-/postsurgical glioma volume and percentage of resection were not associated with overall survival. CONCLUSIONS:-mutant 1p/19q-noncodeleted astrocytomas.
PMID: 31248860
ISSN: 1936-959x
CID: 3963922
MR imaging phenotype correlates with extent of genome-wide copy number abundance in IDH mutant gliomas
Wu, Chih-Chun; Jain, Rajan; Neto, Lucidio; Patel, Seema; Poisson, Laila M; Serrano, Jonathan; Ng, Victor; Patel, Sohil H; Placantonakis, Dimitris G; Zagzag, David; Golfinos, John; Chi, Andrew S; Snuderl, Matija
PURPOSE/OBJECTIVE:There is variability in survival within IDH mutant gliomas determined by chromosomal events. Copy number variation (CNV) abundance associated with survival in low-grade and IDH mutant astrocytoma has been reported. Our purpose was to correlate the extent of genome-wide CNV abundance in IDH mutant astrocytomas with MRI features. METHODS:Presurgical MRI and CNV plots derived from Illumina 850k EPIC DNA methylation arrays of 18 cases of WHO grade II-IV IDH mutant astrocytomas were reviewed. IDH mutant astrocytomas were divided into CNV stable group (CNV-S) with ≤ 3 chromosomal gains or losses and lack of focal gene amplifications and CNV unstable group (CNV-U) with > 3 large chromosomal gains/losses and/or focal amplifications. The associations between MR features, relative cerebral blood volume (rCBV), CNV abundance, and time to progression were assessed. Tumor rCBV estimates were obtained using DSC T2* perfusion analysis. RESULTS:There were nine (50%) CNV-S and nine (50%) CNV-U IDH mutant astrocytomas. CNV-U tumors showed larger mean tumor size (P = 0.004) and maximum diameter on FLAIR (P = 0.004) and also demonstrated significantly higher median rCBV than CNV-S tumors (2.62 vs 0.78, P = 0.019). CNV-U tumors tended to have shorter time to progression although without statistical significance (P = 0.393). CONCLUSIONS:Larger size/diameter and higher rCBVs were seen associated CNV-U astrocytomas, suggesting a correlation of aggressive imaging phenotype with unstable and aggressive genotype in IDH mutant astrocytomas.
PMID: 31134296
ISSN: 1432-1920
CID: 3921332
Neuroimaging-Based Classification Algorithm for Predicting 1p/19q-Codeletion Status in IDH-Mutant Lower Grade Gliomas
Batchala, P P; Muttikkal, T J E; Donahue, J H; Patrie, J T; Schiff, D; Fadul, C E; Mrachek, E K; Lopes, M-B; Jain, R; Patel, S H
BACKGROUND AND PURPOSE/OBJECTIVE:-mutant lower grade gliomas based on simple neuroimaging metrics. MATERIALS AND METHODS/METHODS:-mutant lower grade gliomas. RESULTS:= 21); and 2) a logistic regression model based on texture, patient age, T2* susceptibility, primary lobe, and hydrocephalus. Independent validation of the classification algorithm rendered codeletion prediction accuracies of 81.1% and 79.2% in 2 independent readers. The metrics used in the algorithm were associated with moderate-substantial interreader agreement (κ = 0.56-0.79). CONCLUSIONS:-mutant lower grade gliomas.
PMID: 30705071
ISSN: 1936-959x
CID: 3626892
Macrovascular Networks on Contrast-Enhanced Magnetic Resonance Imaging Improves Survival Prediction in Newly Diagnosed Glioblastoma
Puig, Josep; Biarnés, Carles; Daunis-I-Estadella, Pepus; Blasco, Gerard; Gimeno, Alfredo; Essig, Marco; Balaña, Carme; Alberich-Bayarri, Angel; Jimenez-Pastor, Ana; Camacho, Eduardo; Thio-Henestrosa, Santiago; Capellades, Jaume; Sanchez-Gonzalez, Javier; Navas-MartÃ, Marian; Domenech-Ximenos, Blanca; Del Barco, Sonia; Puigdemont, Montserrat; Leiva-Salinas, Carlos; Wintermark, Max; Nael, Kambiz; Jain, Rajan; Pedraza, Salvador
A higher degree of angiogenesis is associated with shortened survival in glioblastoma. Feasible morphometric parameters for analyzing vascular networks in brain tumors in clinical practice are lacking. We investigated whether the macrovascular network classified by the number of vessel-like structures (nVS) visible on three-dimensional T1-weighted contrastâ»enhanced (3D-T1CE) magnetic resonance imaging (MRI) could improve survival prediction models for newly diagnosed glioblastoma based on clinical and other imaging features. Ninety-seven consecutive patients (62 men; mean age, 58 ± 15 years) with histologically proven glioblastoma underwent 1.5T-MRI, including anatomical, diffusion-weighted, dynamic susceptibility contrast perfusion, and 3D-T1CE sequences after 0.1 mmol/kg gadobutrol. We assessed nVS related to the tumor on 1-mm isovoxel 3D-T1CE images, and relative cerebral blood volume, relative cerebral flow volume (rCBF), delay mean time, and apparent diffusion coefficient in volumes of interest for contrast-enhancing lesion (CEL), non-CEL, and contralateral normal-appearing white matter. We also assessed Visually Accessible Rembrandt Images scoring system features. We used ROC curves to determine the cutoff for nVS and univariate and multivariate cox proportional hazards regression for overall survival. Prognostic factors were evaluated by Kaplan-Meier survival and ROC analyses. Lesions with nVS > 5 were classified as having highly developed macrovascular network; 58 (60.4%) tumors had highly developed macrovascular network. Patients with highly developed macrovascular network were older, had higher volumeCEL, increased rCBFCEL, and poor survival; nVS correlated negatively with survival (r = -0.286; p = 0.008). On multivariate analysis, standard treatment, age at diagnosis, and macrovascular network best predicted survival at 1 year (AUC 0.901, 83.3% sensitivity, 93.3% specificity, 96.2% PPV, 73.7% NPV). Contrast-enhanced MRI macrovascular network improves survival prediction in newly diagnosed glioblastoma.
PMID: 30646519
ISSN: 2072-6694
CID: 3594832
There is an exception to every rule-T2-FLAIR mismatch sign in gliomas
Johnson, Derek R; Kaufmann, Timothy J; Patel, Sohil H; Chi, Andrew S; Snuderl, Matija; Jain, Rajan
The T2-FLAIR mismatch sign, in which a low-grade glioma is hyperintense on T2-weighted MR and centrally hypointense on T2-weighted FLAIR MR, has been reported as 100% specific for IDH-mutant astrocytomas in several series. We report several cases of "false positive" T2-FLAIR mismatch sign occurring outside the context of IDH-mutant astrocytomas, predominantly in children or young adults with pediatric-type gliomas. These results suggest caution in the interpretation of the T2-FLAIR mismatch sign in the pediatric glioma population.
PMID: 30565056
ISSN: 1432-1920
CID: 3557052
Cell surface Notch ligand DLL3 is a therapeutic target in isocitrate dehydrogenase mutant glioma
Spino, Marissa; Kurz, Sylvia C; Chiriboga, Luis; Serrano, Jonathan; Zeck, Briana; Sen, Namita; Patel, Seema; Shen, Guomiao; Vasudevaraja, Varshini; Tsirigos, Aristotelis; Suryadevara, Carter M; Frenster, Joshua D; Tateishi, Kensuke; Wakimoto, Hiroaki; Jain, Rajan; Riina, Howard A; Nicolaides, Theodore; Sulman, Erik P; Cahill, Daniel P; Golfinos, John G; Isse, Kumiko; Saunders, Laura R; Zagzag, David; Placantonakis, Dimitris G; Snuderl, Matija; Chi, Andrew S
PURPOSE/OBJECTIVE:Isocitrate dehydrogenase (IDH) mutant gliomas are a distinct glioma molecular subtype for which no effective molecularly-directed therapy exists. Low-grade gliomas, which are 80-90% IDH mutant, have high RNA levels of the cell surface Notch ligand DLL3. We sought to determine DLL3 expression by immunohistochemistry in glioma molecular subtypes and the potential efficacy of an anti-DLL3 antibody drug conjugate (ADC), rovalpituzumab tesirine (Rova-T), in IDH mutant glioma. EXPERIMENTAL DESIGN/METHODS:We evaluated DLL3 expression by RNA using TCGA data and by immunohistochemistry in a discovery set of 63 gliomas and 20 non-tumor brain tissues and a validation set of 62 known IDH wildtype and mutant gliomas using a monoclonal anti-DLL3 antibody. Genotype was determined using a DNA methylation array classifier or by sequencing. The effect of Rova-T on patient-derived endogenous IDH mutant glioma tumorspheres was determined by cell viability assay. RESULTS:Compared to IDH wildtype glioblastoma, IDH mutant gliomas have significantly higher DLL3 RNA (P<1x10-15) and protein by immunohistochemistry (P=0.0014 and P<4.3x10-6 in the discovery and validation set, respectively). DLL3 immunostaining was intense and homogeneous in IDH mutant gliomas, retained in all recurrent tumors, and detected in only 1 of 20 non-tumor brains. Patient-derived IDH mutant glioma tumorspheres overexpressed DLL3 and were potently sensitive to Rova-T in an antigen-dependent manner. CONCLUSIONS:DLL3 is selectively and homogeneously expressed in IDH mutant gliomas and can be targeted with Rova-T in patient-derived IDH mutant glioma tumorspheres. Our findings are potentially immediately translatable and have implications for therapeutic strategies that exploit cell surface tumor-associated antigens.
PMID: 30397180
ISSN: 1078-0432
CID: 3455762
State of the Art: Machine Learning Applications in Glioma Imaging
Lotan, Eyal; Jain, Rajan; Razavian, Narges; Fatterpekar, Girish M; Lui, Yvonne W
OBJECTIVE:Machine learning has recently gained considerable attention because of promising results for a wide range of radiology applications. Here we review recent work using machine learning in brain tumor imaging, specifically segmentation and MRI radiomics of gliomas. CONCLUSION/CONCLUSIONS:We discuss available resources, state-of-the-art segmentation methods, and machine learning radiomics for glioma. We highlight the challenges of these techniques as well as the future potential in clinical diagnostics, prognostics, and decision making.
PMID: 30332296
ISSN: 1546-3141
CID: 3368562
High-Grade Glioma, Including Diffuse Intrinsic Pontine Glioma
Chapter by: Karajannis, Matthias A; Snuderl, Matija; Yeh, Brian K; Walsh, Michael F; Jain, Rajan; Sahasrabudhe, Nikhil A; Wisoff, Jeffrey H
in: Brain Tumors in Children by Gajjar, Amar; Reaman, Gregory H; Racadio, Judy M; Smith, Franklin O (Eds)
Cham : Springer, 2018
pp. 193-221
ISBN: 3319432052
CID: 3732452
Anti-Myelin Oligodendrocyte Glycoprotein (MOG) Antibodies in a Patient with Ataxia, Diplopia, and an Enhancing Cerebellar Lesion [Meeting Abstract]
Gutman, Josef; Fouladvand, Mohammad; Jafar, Jafar; Jain, Rajan; Kister, Ilya
ISI:000453090805156
ISSN: 0028-3878
CID: 3732432
Two novel mutations in CP associated with Aceruloplasminemia and basal ganglia cavitation [Meeting Abstract]
Riboldi, Giulietta Maria; Anstett, Kara; Jain, Rajan; Lau, Heather; Swope, David
ISI:000453090804319
ISSN: 0028-3878
CID: 3561742