Faculty Bibliography

Immunohistochemical labeling is dependent on the ability of the primary antibody to recognize and bind its corresponding epitope in tissue and cells. Immunoreactivity between antibodies and their target epitopes can be highly variable in immunohistochemistry, due to pre-analytical processing of tissues. Specifically, formalin fixation results in the formation of cross-links and conformational changes of the target epitope. While antigen retrieval techniques can be used to reverse cross-linking and conformational effects of tissue processing, existing research has not specifically examined the epitope sequences of antibodies used in immunohistochemical assays. Amino acid epitope sequences from 102 commercially available antibodies were compiled and the relative amino acid frequency from the series determined and were compared to the relative abundance of amino acids in a larger group of proteins. The frequency of amino acids in the data set based on side chain polarity, charge, and structure was also examined. Our data indicate that the most abundant amino acids within epitope sequence were serine, proline, and leucine. In addition, serine, proline and glutamic acid were present more frequently in epitope sequences than in proteins in general. These preliminary findings suggest that amino acid sequences of epitopes antibodies used for immunohistochemistry may share commonality. In addition, the presence of specific amino acids with higher frequency in the epitope, as well as the properties of these amino acids within the target sequence, may play a role in the behavior of antibody-antigen reactions in immunohistochemical assays.

Estrogen receptors (ER) play important roles in the development and progression of breast and ovarian cancers. ERs mediate transcriptional regulation through interaction with cofactors and binding to response elements within the regulatory elements of target genes. Here, we examined the expression and function of TBLR1/TBL1XR1, a core component of NCoR (nuclear receptor corepressor) and SMRT (silencing mediator of retinoic acid and thyroid receptor) corepressor complexes, in breast and ovarian cancers. We found that although TBLR1 is present in both the nucleus and cytoplasm of normal and neoplastic breast and ovarian cells, it is expressed at significantly higher levels in the nucleus of malignant breast and ovarian cells compared to benign cells. TBLR1 functions as an ER corepressor to inhibit ER-mediated transcriptional activation in both breast and ovarian cell lines, but it has no effect on androgen receptor (AR) mediated transcriptional activation in these cells. Furthermore, ectopic expression of nuclear TBLR1 in breast and ovarian cancer cells stimulates cell proliferation. The increased cell proliferation by nuclear TBLR1 is through both ER-independent and ER-dependent mechanisms as evidenced by increased growth in hormone-free medium and estrogen medium, as well as reduced growth with ER knockdown by siRNA. Nuclear TBLR1 overexpression also increased migration and invasion in both breast and ovarian cancer cells. Determining the functional relationship between TBLR1 and ER may provide insights to develop novel treatment strategies and improve response to hormonal therapy in breast and ovarian cancers.

BACKGROUND: Long considered to be inert organelles for lipid storage, lipid droplets (LDs) have recently attracted great interest as dynamic structures central to cellular lipid and energy metabolism. hypoxia-inducible gene (HIG2) and perilipin 2 (PLIN2, adipophilin) are LD-associated proteins known to be upregulated by hypoxia (Bensaad, 2014) and/or following von Hippel-Lindau (VHL) gene inactivation (Togashi, 2005; Yao, 2005). We sought to determine whether overexpression of HIG2 and PLIN2 in response to hypoxia or pseudohypoxia may be involved in these histopathologic features of glioma and hemangioblastoma. METHODS: Tumor specimens from 12 patients with glioma grade II-IV (age 3-59 y) and 23 patients with CNS hemangioblastoma (age 15-63 y) were analyzed by immunohistochemistry (IHC) to delineate their expression of HIG2 and PLIN2. To evaluate the role of hypoxia, glioblastoma (GBM) tissues (n = 2) were double-label immunostained for HIF-1alpha and PLIN2 (Zagzag, 2008). Additionally, cultures of tumor spheres isolated from GBM patients (n = 2) (Bayin, 2014) were exposed to hypoxic (1% O2) conditions for 24-72 h, and the cell proteins analyzed by Western blots. RESULTS: HIG2 and PLIN2 were consistently expressed on LDs in hypoxic glioma tumor cells, including pseudopalisading cells in GBMs, but not in adjacent hyperplastic vessels, inflammatory cells or normal brain tissue, independently of tumor grade or the presence of IDH1 (n = 3) and/or TP53 (n = 7) mutations. Likewise, LDs in stromal tumor cells in hemangioblastoma were intensely immunopositive for HIG2 and PLIN2. Double-label IHC showed tight co-expression of HIF-1a and PLIN2 in glioma tumor cells, consistent with the hypoxic regulation of PLIN2. Similarly, expression of HIF-1a and HIG2 proteins was upregulated in GBM tumor spheres under hypoxic conditions. CONCLUSIONS: Our results suggest that HIG2 and PLIN2 are involved in the hypoxic adaptation of lipid metabolism during tumorigenesis, and may serve as specific biomarkers of glioma tumor cells and stromal cells in CNS hemangioblastoma

At least 170 million people are chronically infected with hepatitis C virus (HCV). Owing to the narrow host range of HCV and restricted use of chimpanzees, there is currently no suitable animal model for HCV pathogenesis studies or the development of a HCV vaccine. To identify cellular determinants of interspecies transmission and establish a novel immunocompetent model system, we examined the ability of HCV to infect hepatocytes from a small nonhuman primate, the rhesus macaque (Macaca mulatta). We show that the rhesus orthologs of critical HCV entry factors support viral glycoprotein-dependent virion uptake. Primary hepatocytes from rhesus macaques are also permissive for HCV-RNA replication and particle production, which is enhanced when antiviral signaling is suppressed. We demonstrate that this may be owing to the diminished capacity of HCV to antagonize mitochondrial antiviral-signaling protein-dependent innate cellular defenses. To test the ability of HCV to establish persistent replication in vivo, we engrafted primary rhesus macaque hepatocytes into immunocompromised xenorecipients. Inoculation of resulting simian liver chimeric mice with either HCV genotype 1a or 2a resulted in HCV serum viremia for up to 10 weeks. CONCLUSION: Together, these data indicate that rhesus macaques may be a viable model for HCV and implicate host immunity as a potential species-specific barrier to HCV infection. We conclude that suppression of host immunity or further viral adaptation may allow robust HCV infection in rhesus macaques and creation of a new animal model for studies of HCV pathogenesis, lentivirus coinfection, and vaccine development. (Hepatology 2015;62:57-67).

The TLR7/8 agonist, Resiquimod has been used as an immune adjuvant in cancer vaccines. We evaluated the safety and immunogenicity of the cancer testis antigen NY-ESO-1 given in combination with Montanide with or without Resiquimod in high risk melanoma patients. In Part I of the study, patients received 100ug full length NY-ESO-1 protein emulsified in 1.25mL Montanide (day 1) followed by topical application of 1000mg of 0.2% Resiquimod gel on days 1 and 3 (Cohort 1) versus days 1, 3, and 5 (Cohort 2) of a 21 day cycle. In Part II, patients were randomized to receive 100ug NY-ESO-1 protein plus Montanide (day 1) followed by topical application of placebo gel (Arm-A; N=8) or 1000mg of 0.2% Resiquimod gel (Arm-B; N=12) using the dosing regimen established in Part I. The vaccine regimens were generally well-tolerated. NY-ESO-1 specific humoral responses were induced or boosted in all patients, many with high titers. In Part II, 16 of 20 patients in both arms had NY-ESO-1-specific CD4+ T cell responses. CD8+ T cell responses were only seen in 3 of 12 patients in Arm B. Patients with TLR7 SNP rs179008 had a greater likelihood of developing NY-ESO-1-specific CD8+ responses. In conclusion, NY-ESO-1 protein in combination with Montanide with or without topical Resiquimod is safe and induces both antibody and CD4+ cell responses in the majority of patients; the small proportion of CD8+ cell responses suggests that the addition of topical Resiquimod to Montanide is not sufficient to induce consistent NY-ESO-1 specific CD8+ cell responses.

In most exposed individuals, hepatitis C virus (HCV) establishes a chronic infection; this long-term infection in turn contributes to the development of liver diseases such as cirrhosis and hepatocellular carcinoma. The role of antibodies directed against HCV in disease progression is poorly understood. Neutralizing antibodies (nAbs) can prevent HCV infection in vitro and in animal models. However, the effects of nAbs on an established HCV infection are unclear. We demonstrate that three broadly nAbs-AR3A, AR3B, and AR4A-delivered with adeno-associated viral vectors can confer protection against viral challenge in humanized mice. Furthermore, we provide evidence that nAbs can abrogate an ongoing HCV infection in primary hepatocyte cultures and in a human liver chimeric mouse model. These results showcase a therapeutic approach to interfere with HCV infection by exploiting a previously unappreciated need for HCV to continuously infect new hepatocytes to sustain a chronic infection.