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Differentiating shunt-responsive normal pressure hydrocephalus from Alzheimer disease and normal aging: pilot study using automated MRI brain tissue segmentation
Serulle, Yafell; Rusinek, Henry; Kirov, Ivan I; Milch, Hannah; Fieremans, Els; Baxter, Alexander B; McMenamy, John; Jain, Rajan; Wisoff, Jeffrey; Golomb, James; Gonen, Oded; George, Ajax E
Evidence suggests that normal pressure hydrocephalus (NPH) is underdiagnosed in day to day radiologic practice, and differentiating NPH from cerebral atrophy due to other neurodegenerative diseases and normal aging remains a challenge. To better characterize NPH, we test the hypothesis that a prediction model based on automated MRI brain tissue segmentation can help differentiate shunt-responsive NPH patients from cerebral atrophy due to Alzheimer disease (AD) and normal aging. Brain segmentation into gray and white matter (GM, WM), and intracranial cerebrospinal fluid was derived from pre-shunt T1-weighted MRI of 15 shunt-responsive NPH patients (9 men, 72.6 +/- 8.0 years-old), 17 AD patients (10 men, 72.1 +/- 11.0 years-old) chosen as a representative of cerebral atrophy in this age group; and 18 matched healthy elderly controls (HC, 7 men, 69.7 +/- 7.0 years old). A multinomial prediction model was generated based on brain tissue volume distributions. GM decrease of 33 % relative to HC characterized AD (P < 0.005). High preoperative ventricular and near normal GM volumes characterized NPH. A multinomial regression model based on gender, GM and ventricular volume had 96.3 % accuracy differentiating NPH from AD and HC. In conclusion, automated MRI brain tissue segmentation differentiates shunt-responsive NPH with high accuracy from atrophy due to AD and normal aging. This method may improve diagnosis of NPH and improve our ability to distinguish normal from pathologic aging.
PMID: 25082631
ISSN: 0340-5354
CID: 1090402
Comparison of human septal nuclei MRI measurements using automated segmentation and a new manual protocol based on histology
Butler, Tracy; Zaborszky, Laszlo; Pirraglia, Elizabeth; Li, Jinyu; Wang, Xiuyuan Hugh; Li, Yi; Tsui, Wai; Talos, Delia; Devinsky, Orrin; Kuchna, Izabela; Nowicki, Krzysztof; French, Jacqueline; Kuzniecky, Rubin; Wegiel, Jerzy; Glodzik, Lidia; Rusinek, Henry; Deleon, Mony J; Thesen, Thomas
Septal nuclei, located in basal forebrain, are strongly connected with hippocampi and important in learning and memory, but have received limited research attention in human MRI studies. While probabilistic maps for estimating septal volume on MRI are now available, they have not been independently validated against manual tracing of MRI, typically considered the gold standard for delineating brain structures. We developed a protocol for manual tracing of the human septal region on MRI based on examination of neuroanatomical specimens. We applied this tracing protocol to T1 MRI scans (n=86) from subjects with temporal epilepsy and healthy controls to measure septal volume. To assess the inter-rater reliability of the protocol, a second tracer used the same protocol on 20 scans that were randomly selected from the 72 healthy controls. In addition to measuring septal volume, maximum septal thickness between the ventricles was measured and recorded. The same scans (n=86) were also analysed using septal probabilistic maps and Dartel toolbox in SPM. Results show that our manual tracing algorithm is reliable, and that septal volume measurements obtained via manual and automated methods correlate significantly with each other (p<.001). Both manual and automated methods detected significantly enlarged septal nuclei in patients with temporal lobe epilepsy in accord with a proposed compensatory neuroplastic process related to the strong connections between septal nuclei and hippocampi. Septal thickness, which was simple to measure with excellent inter-rater reliability, correlated well with both manual and automated septal volume, suggesting it could serve as an easy-to-measure surrogate for septal volume in future studies. Our results call attention to the important though understudied human septal region, confirm its enlargement in temporal lobe epilepsy, and provide a reliable new manual delineation protocol that will facilitate continued study of this critical region.
PMCID:4180657
PMID: 24736183
ISSN: 1053-8119
CID: 908982
DCE-MRI of the liver: Effect of linear and nonlinear conversions on hepatic perfusion quantification and reproducibility
Aronhime, Shimon; Calcagno, Claudia; Jajamovich, Guido H; Dyvorne, Hadrien Arezki; Robson, Philip; Dieterich, Douglas; Isabel Fiel, M; Martel-Laferriere, Valerie; Chatterji, Manjil; Rusinek, Henry; Taouli, Bachir
PURPOSE: To evaluate the effect of different methods to convert magnetic resonance (MR) signal intensity (SI) to gadolinium concentration ([Gd]) on estimation and reproducibility of model-free and modeled hepatic perfusion parameters measured with dynamic contrast-enhanced (DCE)-MRI. MATERIALS AND METHODS: In this Institutional Review Board (IRB)-approved prospective study, 23 DCE-MRI examinations of the liver were performed on 17 patients. SI was converted to [Gd] using linearity vs. nonlinearity assumptions (using spoiled gradient recalled echo [SPGR] signal equations). The [Gd] vs. time curves were analyzed using model-free parameters and a dual-input single compartment model. Perfusion parameters obtained with the two conversion methods were compared using paired Wilcoxon test. Test-retest and interobserver reproducibility of perfusion parameters were assessed in six patients. RESULTS: There were significant differences between the two conversion methods for the following parameters: AUC60 (area under the curve at 60 s, P < 0.001), peak gadolinium concentration (Cpeak, P < 0.001), upslope (P < 0.001), Fp (portal flow, P = 0.04), total hepatic flow (Ft, P = 0.007), and MTT (mean transit time, P < 0.001). Our preliminary results showed acceptable to good reproducibility for all model-free parameters for both methods (mean coefficient of variation [CV] range, 11.87-23.7%), except for upslope (CV = 37%). Among modeled parameters, DV (distribution volume) had CV <22% with both methods, PV and MTT showed CV <21% and <29% using SPGR equations, respectively. Other modeled parameters had CV >30% with both methods. CONCLUSION: Linearity assumption is acceptable for quantification of model-free hepatic perfusion parameters while the use of SPGR equations and T1 mapping may be recommended for the quantification of modeled hepatic perfusion parameters. J. Magn. Reson. Imaging 2014;40:90-98 (c) 2013 Wiley Periodicals, Inc.
PMCID:4058642
PMID: 24923476
ISSN: 1053-1807
CID: 1033832
New magnetic resonance imaging methods in nephrology
Zhang, Jeff L; Morrell, Glen; Rusinek, Henry; Sigmund, Eric E; Chandarana, Hersh; Lerman, Lilach O; Prasad, Pottumarthi V; Niles, David; Artz, Nathan; Fain, Sean; Vivier, Pierre-Hugues; Cheung, Alfred K; Lee, Vivian S
Established as a method to study anatomic changes, such as renal tumors or atherosclerotic vascular disease, magnetic resonance imaging (MRI) to interrogate renal function has only recently begun to come of age. In this review, we briefly introduce some of the most important MRI techniques for renal functional imaging, and then review current findings on their use for diagnosis and monitoring of major kidney diseases. Specific applications include renovascular disease, diabetic nephropathy, renal transplants, renal masses, acute kidney injury, and pediatric anomalies. With this review, we hope to encourage more collaboration between nephrologists and radiologists to accelerate the development and application of modern MRI tools in nephrology clinics.
PMCID:3965662
PMID: 24067433
ISSN: 0085-2538
CID: 900422
Dynamic Contrast-Enhanced MR Renography for Renal Function Evaluation in Ureteropelvic Junction Obstruction: Feasibility Study
Krepkin, Konstantin; Won, Eugene; Ramaswamy, Krishna; Triolo, Michael; Stiffelma, Michael; Rusinek, Henry; Chandarana, Hersh
OBJECTIVE. The purpose of this study was to evaluate split renal function, estimate single-kidney renal function, and identify cause of obstruction in patients with ureteropelvic junction (UPJ) obstruction by using contrast-enhanced dynamic MR renography (MRR). MATERIALS AND METHODS. Seventeen patients with UPJ obstruction underwent MRR and diuresis nuclear renography. Nuclear renography assessment of split renal function and mechanical versus functional obstruction served as the reference standard. The Baumann-Rudin model for determining glomerular filtration rate (GFR) was applied to generate single-kidney renal function (SK-GFRMRR) from MRR cortical and medullary enhancement curves. MRR split renal function of the right kidney (SK-GFRMRR of the right kidney normalized to the sum of SK-GFRMRR of both kidneys) was compared with nuclear renography. The MRR estimate of total GFR (eGFRMRR) was compared with that derived from Modification of Diet in Renal Disease (MDRD) formula (eGFRMDRD). Renal pelvic rate of signal intensity change (PUR) was compared between functionally and mechanically obstructed kidneys. RESULTS. There was excellent correlation between MRR and nuclear renography measure of split renal function ratio (r = 0.87, p < 0.01), with mean difference of less than 10%. There was moderate correlation (r = 0.60, p = 0.01) between eGFRMRR and eGFRMDRD. eGFRMRR underestimated eGFRMDRD, with mean difference of 13.3 mL/min/1.73 m(2). PUR in mechanically obstructed units was significantly lower (0.39 +/- 0.26 vs 2.0 +/- 1.38 min(-1); p < 0.01) compared with functionally obstructed units. PUR discriminated mechanical from functional obstruction with accuracy of 89%. CONCLUSION. In patients with UPJ obstruction, MRR can measure split renal function, estimate eGFRMDRD with moderate correlation, and accurately discriminate mechanical from functional obstruction, thus potentially providing a "one-stop shop" examination.
PMID: 24660706
ISSN: 0361-803x
CID: 900432
Measurement of renal tissue oxygenation with blood oxygen level-dependent MRI and oxygen transit modeling
Zhang, Jeff L; Morrell, Glen; Rusinek, Henry; Warner, Lizette; Vivier, Pierre-Hugues; Cheung, Alfred K; Lerman, Lilach O; Lee, Vivian S
Blood oxygen level-dependent (BOLD) MRI data of kidney, while indicative of tissue oxygenation level (Po2), is in fact influenced by multiple confounding factors, such as R2, perfusion, oxygen permeability, and hematocrit. We aim to explore the feasibility of extracting tissue Po2 from renal BOLD data. A method of two steps was proposed: first, a Monte Carlo simulation to estimate blood oxygen saturation (SHb) from BOLD signals, and second, an oxygen transit model to convert SHb to tissue Po2. The proposed method was calibrated and validated with 20 pigs (12 before and after furosemide injection) in which BOLD-derived tissue Po2 was compared with microprobe-measured values. The method was then applied to nine healthy human subjects (age: 25.7 +/- 3.0 yr) in whom BOLD was performed before and after furosemide. For the 12 pigs before furosemide injection, the proposed model estimated renal tissue Po2 with errors of 2.3 +/- 5.2 mmHg (5.8 +/- 13.4%) in cortex and -0.1 +/- 4.5 mmHg (1.7 +/- 18.1%) in medulla, compared with microprobe measurements. After injection of furosemide, the estimation errors were 6.9 +/- 3.9 mmHg (14.2 +/- 8.4%) for cortex and 2.6 +/- 4.0 mmHg (7.7 +/- 11.5%) for medulla. In the human subjects, BOLD-derived medullary Po2 increased from 16.0 +/- 4.9 mmHg (SHb: 31 +/- 11%) at baseline to 26.2 +/- 3.1 mmHg (SHb: 53 +/- 6%) at 5 min after furosemide injection, while cortical Po2 did not change significantly at approximately 58 mmHg (SHb: 92 +/- 1%). Our proposed method, validated with a porcine model, appears promising for estimating tissue Po2 from renal BOLD MRI data in human subjects.
PMCID:3949039
PMID: 24452640
ISSN: 1522-1466
CID: 918072
Performance of an automated renal segmentation algorithm based on morphological erosion and connectivity [Meeting Abstract]
Abiri, Benjamin; Park, Brian; Chandarana, Hersh; Mikheev, Artem; Lee, Vivian S; Rusinek, Henry
The precision, accuracy, and efficiency of a novel semi-automated renal segmentation technique for volumetric interpolated breath-hold sequence (VIBE) MRI sequences was analyzed using 7 clinical datasets (14 kidneys). Two observers performed whole-kidney segmentation using EdgeWave segmentation software based on constrained morphological growth. Ground truths were prepared by manual tracing of kidney on each of approximately 40 slices. Using the software, the average inter-observer disagreement was 2.7%+/- 2.1% for whole kidney volume, 2.1%+/- 1.8% for cortex, and 4.1%+/- 3.2% for medulla. In comparison to the ground truth kidney volume, the error was 2.8%+/- 2.5% for whole kidney volume, 3.1%+/- 1.7% for cortex, and 3.6%+/-.3.1% for medulla. It took an average of 4:14 +/- 1:42 minutes of operator time, plus 2:56 +/- 1:23 minutes of computer time to perform segmentation of one whole kidney, cortex, and medulla. Segmentation speed, inter-observer agreement and accuracy were several times better than those of our existing graph-cuts segmentation technique requiring approximately 20 minutes per case and with 7-10% error. With the expedited image processing, high inter-observer agreement, and volumes closely matching true values, kidney volumetry becomes a reality in many clinical applications.
ISI:000337842400094
ISSN: 0277-786x
CID: 2509772
Blood pressure decrease correlates with tau pathology and memory decline in hypertensive elderly
Glodzik, Lidia; Rusinek, Henry; Pirraglia, Elizabeth; McHugh, Pauline; Tsui, Wai; Williams, Schantel; Cummings, Megan; Li, Yi; Rich, Kenneth; Randall, Catherine; Mosconi, Lisa; Osorio, Ricardo; Murray, John; Zetterberg, Henrik; Blennow, Kaj; de Leon, Mony
In hypertension (HTN), cerebral blood flow regulation limits are changed, and the threshold for blood pressure (BP) at which perfusion is safely maintained is higher. This shift may increase the brain's vulnerability to lower BP in subjects with vascular disease. We investigated whether longitudinal reduction in mean arterial pressure (MAP) was related to changes in cerebrospinal fluid (CSF) biomarkers of Alzheimer's disease in a group of cognitively healthy elderly with and without HTN. The relationships among MAP, memory decline, and hippocampal atrophy were also examined. Seventy-seven subjects (age 63.4 +/- 9.4, range 44-86 years; education 16.9 +/- 2.1, range 10-22 years; 60% women) were assessed twice, 2 +/- 0.5 years apart. At both time points, all subjects underwent full medical and neuropsychological evaluations, lumbar punctures, and magnetic resonance imaging examinations. Twenty-five subjects had HTN. Hyper- and normotensive subjects did not differ in their CSF biomarkers, hippocampal volumes (HipVs), or memory scores at baseline. In the entire study group, the increase in tau phosphorylated at threonine 181 (p-tau181) was associated with a decline in verbal episodic memory (beta = -0.30, p = 0.01) and HipV reduction (beta = -0.27, p = 0.02). However, longitudinal decrease in MAP was related to memory decline (beta = 0.50, p = 0.01) and an increase in p-tau181 (beta = -0.50, p = 0.01) only in subjects with HTN. Our findings suggest that the hypertensive group may be sensitive to BP reductions.
PMCID:3799812
PMID: 23969178
ISSN: 0197-4580
CID: 573802
PROSTATE TUMOR VOLUMES: AGREEMENT BETWEEN MRI AND HISTOLOGY USING NOVEL CO-REGISTRATION SOFTWARE [Meeting Abstract]
Le Nobin, Julien; Orczyk, Clement; Deng, Fang-Ming; Melamed, Jonathan; Rusinek, Henry; Taneja, Samir; Rosenkrantz, Andrew
ISI:000350277902471
ISSN: 1527-3792
CID: 1871812
DCE-MRI of the Liver: Reconstruction of the Arterial Input Function Using a Low Dose Pre-Bolus Contrast Injection
Jajamovich, Guido H; Calcagno, Claudia; Dyvorne, Hadrien A; Rusinek, Henry; Taouli, Bachir
PURPOSE: To assess the quality of the arterial input function (AIF) reconstructed using a dedicated pre-bolus low-dose contrast material injection imaged with a high temporal resolution and the resulting estimated liver perfusion parameters. MATERIALS AND METHODS: In this IRB-approved prospective study, 24 DCE-MRI examinations were performed in 21 patients with liver disease (M/F 17/4, mean age 56 y). The examination consisted of 1.3 mL and 0.05 mmol/kg of gadobenate dimeglumine for pre-bolus and main bolus acquisitions, respectively. The concentration-curve of the abdominal aorta in the pre-bolus acquisition was used to reconstruct the AIF. AIF quality and shape parameters obtained with pre-bolus and main bolus acquisitions and the resulting estimated hepatic perfusion parameters obtained with a dual-input single compartment model were compared between the 2 methods. Test-retest reproducibility of perfusion parameters were assessed in three patients. RESULTS: The quality of the pre-bolus AIF curve was significantly better than that of main bolus AIF. Shape parameters peak concentration, area under the time activity curve of gadolinium contrast at 60 s and upslope of pre-bolus AIF were all significantly higher, while full width at half maximum was significantly lower than shape parameters of main bolus AIF. Improved liver perfusion parameter reproducibility was observed using pre-bolus acquisition [coefficient of variation (CV) of 4.2%-38.7% for pre-bolus vs. 12.1-71.4% for main bolus] with the exception of distribution volume (CV of 23.6% for pre-bolus vs. 15.8% for main bolus). The CVs between pre-bolus and main bolus for the perfusion parameters were lower than 14%. CONCLUSION: The AIF reconstructed with pre-bolus low dose contrast injection displays better quality and shape parameters and enables improved liver perfusion parameter reproducibility, although the resulting liver perfusion parameters demonstrated no clinically significant differences between pre-bolus and main bolus acquisitions.
PMCID:4278725
PMID: 25546176
ISSN: 1932-6203
CID: 1419842