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Genome-wide Association Study Identifies Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region

Skibola, Christine F; Berndt, Sonja I; Vijai, Joseph; Conde, Lucia; Wang, Zhaoming; Yeager, Meredith; de Bakker, Paul I W; Birmann, Brenda M; Vajdic, Claire M; Foo, Jia-Nee; Bracci, Paige M; Vermeulen, Roel C H; Slager, Susan L; de Sanjose, Silvia; Wang, Sophia S; Linet, Martha S; Salles, Gilles; Lan, Qing; Severi, Gianluca; Hjalgrim, Henrik; Lightfoot, Tracy; Melbye, Mads; Gu, Jian; Ghesquieres, Herve; Link, Brian K; Morton, Lindsay M; Holly, Elizabeth A; Smith, Alex; Tinker, Lesley F; Teras, Lauren R; Kricker, Anne; Becker, Nikolaus; Purdue, Mark P; Spinelli, John J; Zhang, Yawei; Giles, Graham G; Vineis, Paolo; Monnereau, Alain; Bertrand, Kimberly A; Albanes, Demetrius; Zeleniuch-Jacquotte, Anne; Gabbas, Attilio; Chung, Charles C; Burdett, Laurie; Hutchinson, Amy; Lawrence, Charles; Montalvan, Rebecca; Liang, Liming; Huang, Jinyan; Ma, Baoshan; Liu, Jianjun; Adami, Hans-Olov; Glimelius, Bengt; Ye, Yuanqing; Nowakowski, Grzegorz S; Dogan, Ahmet; Thompson, Carrie A; Habermann, Thomas M; Novak, Anne J; Liebow, Mark; Witzig, Thomas E; Weiner, George J; Schenk, Maryjean; Hartge, Patricia; De Roos, Anneclaire J; Cozen, Wendy; Zhi, Degui; Akers, Nicholas K; Riby, Jacques; Smith, Martyn T; Lacher, Mortimer; Villano, Danylo J; Maria, Ann; Roman, Eve; Kane, Eleanor; Jackson, Rebecca D; North, Kari E; Diver, W Ryan; Turner, Jenny; Armstrong, Bruce K; Benavente, Yolanda; Boffetta, Paolo; Brennan, Paul; Foretova, Lenka; Maynadie, Marc; Staines, Anthony; McKay, James; Brooks-Wilson, Angela R; Zheng, Tongzhang; Holford, Theodore R; Chamosa, Saioa; Kaaks, Rudolph; Kelly, Rachel S; Ohlsson, Bodil; Travis, Ruth C; Weiderpass, Elisabete; Clavel, Jacqueline; Giovannucci, Edward; Kraft, Peter; Virtamo, Jarmo; Mazza, Patrizio; Cocco, Pierluigi; Ennas, Maria Grazia; Chiu, Brian C H; Fraumeni, Joseph F Jr; Nieters, Alexandra; Offit, Kenneth; Wu, Xifeng; Cerhan, James R; Smedby, Karin E; Chanock, Stephen J; Rothman, Nathaniel
Genome-wide association studies (GWASs) of follicular lymphoma (FL) have previously identified human leukocyte antigen (HLA) gene variants. To identify additional FL susceptibility loci, we conducted a large-scale two-stage GWAS in 4,523 case subjects and 13,344 control subjects of European ancestry. Five non-HLA loci were associated with FL risk: 11q23.3 (rs4938573, p = 5.79 x 10(-20)) near CXCR5; 11q24.3 (rs4937362, p = 6.76 x 10(-11)) near ETS1; 3q28 (rs6444305, p = 1.10 x 10(-10)) in LPP; 18q21.33 (rs17749561, p = 8.28 x 10(-10)) near BCL2; and 8q24.21 (rs13254990, p = 1.06 x 10(-8)) near PVT1. In an analysis of the HLA region, we identified four linked HLA-DRbeta1 multiallelic amino acids at positions 11, 13, 28, and 30 that were associated with FL risk (pomnibus = 4.20 x 10(-67) to 2.67 x 10(-70)). Additional independent signals included rs17203612 in HLA class II (odds ratio [ORper-allele] = 1.44; p = 4.59 x 10(-16)) and rs3130437 in HLA class I (ORper-allele = 1.23; p = 8.23 x 10(-9)). Our findings further expand the number of loci associated with FL and provide evidence that multiple common variants outside the HLA region make a significant contribution to FL risk.
PMCID:4185120
PMID: 25279986
ISSN: 0002-9297
CID: 1283182

Genome-wide association study identifies multiple susceptibility loci for diffuse large B-cell lymphoma [Meeting Abstract]

Cerhan, James R; Berndt, Sonja I; Vijai, Joseph; Ghesquieres, Herve; McKay, James; Wang, Sophia S; Wang, Zhaoming; Yeager, Meredith; Nieters, Alexandra; Cox, David; Monnereau, Alain; Flowers, Christopher; De Roos, Anneclaire J; Brooks-Wilson, Angela R; Lan, Qing; Severi, Gianluca; Melbye, Mads; Jackson, Rebecca D; Teras, Lauren R; Purdue, Mark; Vajdic, Claire; Albanes, Demetrius; Bertrand, Kimberly A; Zeleniuch-Jacquotte, Anne; Crouch, Simon; Zhang, Yawei; Vineis, Paolo; Slager, Susan L; Smedby, Karin E; Salles, Gilles; Skibola, Christine F; Rothman, Nathaniel; Chanock, Stephen J; NHL GWAS Project
ISI:000349910205303
ISSN: 1538-7445
CID: 1599332

Infertility and risk of incident endometrial carcinoma: a pooled analysis from the Epidemiology of Endometrial Cancer Consortium [Meeting Abstract]

Yang, Hannah P; Cook, Linda S; Weiderpass, Elisabete; Adami, Hans-Olov; Anderson, Kristin E; Cai, Hui; Cerhan, James R; Clendenen, Tess; Felix, Ashley S; Friedenreich, Christine; Garcia-Closas, Montserrat; Goodman, Marc T; Liang, Xiaolin; Lissowska, Jolanta; Lu, Lingeng; Magliocco, Anthony M; McCann, Susan E; Moysich, Kristen B; Olson, Sara H; Pike, Malcolm C; Polidoro, Silvia; Ricceri, Fulvio; Risch, Harvey; Sacerdote, Carlotta; Setiawan, VWendy; Shu, Xiao O; Spurdle, Amanda B; Trabert, Britton; Webb, Penelope M; Wentzensen, Nicolas; Xiang, Yong-Bing; Xu, Youming; Yu, Herbert; Zeleniuch-Jacquotte, Anne; Brinton, Louise A
ISI:000349906902379
ISSN: 1538-7445
CID: 1599152

Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer

Wolpin, Brian M; Rizzato, Cosmeri; Kraft, Peter; Kooperberg, Charles; Petersen, Gloria M; Wang, Zhaoming; Arslan, Alan A; Beane-Freeman, Laura; Bracci, Paige M; Buring, Julie; Canzian, Federico; Duell, Eric J; Gallinger, Steven; Giles, Graham G; Goodman, Gary E; Goodman, Phyllis J; Jacobs, Eric J; Kamineni, Aruna; Klein, Alison P; Kolonel, Laurence N; Kulke, Matthew H; Li, Donghui; Malats, Nuria; Olson, Sara H; Risch, Harvey A; Sesso, Howard D; Visvanathan, Kala; White, Emily; Zheng, Wei; Abnet, Christian C; Albanes, Demetrius; Andreotti, Gabriella; Austin, Melissa A; Barfield, Richard; Basso, Daniela; Berndt, Sonja I; Boutron-Ruault, Marie-Christine; Brotzman, Michelle; Buchler, Markus W; Bueno-de-Mesquita, H Bas; Bugert, Peter; Burdette, Laurie; Campa, Daniele; Caporaso, Neil E; Capurso, Gabriele; Chung, Charles; Cotterchio, Michelle; Costello, Eithne; Elena, Joanne; Funel, Niccola; Gaziano, J Michael; Giese, Nathalia A; Giovannucci, Edward L; Goggins, Michael; Gorman, Megan J; Gross, Myron; Haiman, Christopher A; Hassan, Manal; Helzlsouer, Kathy J; Henderson, Brian E; Holly, Elizabeth A; Hu, Nan; Hunter, David J; Innocenti, Federico; Jenab, Mazda; Kaaks, Rudolf; Key, Timothy J; Khaw, Kay-Tee; Klein, Eric A; Kogevinas, Manolis; Krogh, Vittorio; Kupcinskas, Juozas; Kurtz, Robert C; LaCroix, Andrea; Landi, Maria T; Landi, Stefano; Le Marchand, Loic; Mambrini, Andrea; Mannisto, Satu; Milne, Roger L; Nakamura, Yusuke; Oberg, Ann L; Owzar, Kouros; Patel, Alpa V; Peeters, Petra H M; Peters, Ulrike; Pezzilli, Raffaele; Piepoli, Ada; Porta, Miquel; Real, Francisco X; Riboli, Elio; Rothman, Nathaniel; Scarpa, Aldo; Shu, Xiao-Ou; Silverman, Debra T; Soucek, Pavel; Sund, Malin; Talar-Wojnarowska, Renata; Taylor, Philip R; Theodoropoulos, George E; Thornquist, Mark; Tjonneland, Anne; Tobias, Geoffrey S; Trichopoulos, Dimitrios; Vodicka, Pavel; Wactawski-Wende, Jean; Wentzensen, Nicolas; Wu, Chen; Yu, Herbert; Yu, Kai; Zeleniuch-Jacquotte, Anne; Hoover, Robert; Hartge, Patricia; Fuchs, Charles; Chanock, Stephen J; Stolzenberg-Solomon, Rachael S; Amundadottir, Laufey T
We performed a multistage genome-wide association study including 7,683 individuals with pancreatic cancer and 14,397 controls of European descent. Four new loci reached genome-wide significance: rs6971499 at 7q32.3 (LINC-PINT, per-allele odds ratio (OR) = 0.79, 95% confidence interval (CI) 0.74-0.84, P = 3.0 x 10-12), rs7190458 at 16q23.1 (BCAR1/CTRB1/CTRB2, OR = 1.46, 95% CI 1.30-1.65, P = 1.1 x 10-10), rs9581943 at 13q12.2 (PDX1, OR = 1.15, 95% CI 1.10-1.20, P = 2.4 x 10-9) and rs16986825 at 22q12.1 (ZNRF3, OR = 1.18, 95% CI 1.12-1.25, P = 1.2 x 10-8). We identified an independent signal in exon 2 of TERT at the established region 5p15.33 (rs2736098, OR = 0.80, 95% CI 0.76-0.85, P = 9.8 x 10-14). We also identified a locus at 8q24.21 (rs1561927, P = 1.3 x 10-7) that approached genome-wide significance located 455 kb telomeric of PVT1. Our study identified multiple new susceptibility alleles for pancreatic cancer that are worthy of follow-up studies.
PMCID:4191666
PMID: 25086665
ISSN: 1061-4036
CID: 1105052

Body size and multiple myeloma mortality: a pooled analysis of 20 prospective studies

Teras, Lauren R; Kitahara, Cari M; Birmann, Brenda M; Hartge, Patricia A; Wang, Sophia S; Robien, Kim; Patel, Alpa V; Adami, Hans-Olov; Weiderpass, Elisabete; Giles, Graham G; Singh, Pramil N; Alavanja, Michael; Beane Freeman, Laura E; Bernstein, Leslie; Buring, Julie E; Colditz, Graham A; Fraser, Gary E; Gapstur, Susan M; Michael Gaziano, J; Giovannucci, Edward; Hofmann, Jonathan N; Linet, Martha S; Neta, Gila; Park, Yikyung; Peters, Ulrike; Rosenberg, Philip S; Schairer, Catherine; Sesso, Howard D; Stampfer, Meir J; Visvanathan, Kala; White, Emily; Wolk, Alicja; Zeleniuch-Jacquotte, Anne; de Gonzalez, Amy Berrington; Purdue, Mark P
Multiple myeloma (MM) is a rare but highly fatal malignancy. High body weight is associated with this cancer, but several questions remain regarding the aetiological relevance of timing and location of body weight. To address these questions, we conducted a pooled analysis of MM mortality using 1.5 million participants (including 1388 MM deaths) from 20 prospective cohorts in the National Cancer Institute Cohort Consortium. Proportional hazards regression was used to calculate pooled multivariate hazard ratios (HRs) and 95% confidence intervals (CIs). Associations with elevated MM mortality were observed for higher early-adult body mass index (BMI; HR = 1.22, 95% CI: 1.09-1.35 per 5 kg/m2 ) and for higher cohort-entry BMI (HR 1.09, 95% CI: 1.03-1.16 per 5 kg/m2 ) and waist circumference (HR = 1.06, 95% CI: 1.02-1.10 per 5 cm). Women who were the heaviest, both in early adulthood (BMI 25+) and at cohort entry (BMI 30+) were at greater risk compared to those with BMI 18.5
PMCID:4134758
PMID: 24861847
ISSN: 0007-1048
CID: 1050612

Pooling prospective studies to investigate the etiology of second cancers

Black, Amanda; Gibson, Todd M; Shiels, Meredith S; Park, Yikyung; Robien, Kim; Albanes, Demetrius; Weinstein, Stephanie J; Beane Freeman, Laura E; Andreotti, Gabriella; Purdue, Mark P; Fraumeni, Joseph F Jr; Hartge, Patricia; Tucker, Margaret A; Hoover, Robert N; Cerhan, James R; Zeleniuch-Jacquotte, Anne; Curtis, Rochelle E; Elena, Joanne; Sampson, Joshua N; Berrington de Gonzalez, Amy; Morton, Lindsay M
Background: With over 13 million cancer survivors in the United States today, second cancers are of rapidly growing importance. However, data on non-treatment risk factors for second cancers are sparse. We explored the feasibility of pooling data from cohort studies of cancer incidence to investigate second cancer etiology. Methods: We combined data from five prospective studies including more than 800,000 individuals. We compared study designs and populations; evaluated availability of and ability to harmonize risk factor data; compared incidence and survival for common first primary malignancies and incidence of second primary malignancies; and estimated sample size requirements. Results: Overall, 96,513 incident, first primary malignancies were diagnosed during 1985-2009. Incidence rates and survival following the first primary varied among the cohorts, but most of the heterogeneity could be explained by characteristics of the study populations (age, sex, smoking, and screening rates). 7,890 second primary cancers (excluding original primary site) were identified, yielding sufficient statistical power (>/=80%) for detecting modest associations with risk of all second cancers among survivors of common first primary malignancies (e.g., colorectal cancer); however, there were insufficient events for studying survivors of rarer cancers or identifying risk factors for specific second cancers. Conclusion: Pooling data from cohort studies to investigate non-treatment risk factors for second primary cancers appears feasible but there are important methodological issues - some of which are barriers to specific research questions - that require special attention. Impact: Increased understanding of non-treatment risk factors for second cancers will provide valuable prevention and surveillance information.
PMCID:4119533
PMID: 24832874
ISSN: 1055-9965
CID: 996512

Association between Class III Obesity (BMI of 40-59 kg/m2) and Mortality: A Pooled Analysis of 20 Prospective Studies

Kitahara, Cari M; Flint, Alan J; Berrington de Gonzalez, Amy; Bernstein, Leslie; Brotzman, Michelle; MacInnis, Robert J; Moore, Steven C; Robien, Kim; Rosenberg, Philip S; Singh, Pramil N; Weiderpass, Elisabete; Adami, Hans Olov; Anton-Culver, Hoda; Ballard-Barbash, Rachel; Buring, Julie E; Freedman, D Michal; Fraser, Gary E; Beane Freeman, Laura E; Gapstur, Susan M; Gaziano, John Michael; Giles, Graham G; Hakansson, Niclas; Hoppin, Jane A; Hu, Frank B; Koenig, Karen; Linet, Martha S; Park, Yikyung; Patel, Alpa V; Purdue, Mark P; Schairer, Catherine; Sesso, Howard D; Visvanathan, Kala; White, Emily; Wolk, Alicja; Zeleniuch-Jacquotte, Anne; Hartge, Patricia
BACKGROUND: The prevalence of class III obesity (body mass index [BMI]>/=40 kg/m2) has increased dramatically in several countries and currently affects 6% of adults in the US, with uncertain impact on the risks of illness and death. Using data from a large pooled study, we evaluated the risk of death, overall and due to a wide range of causes, and years of life expectancy lost associated with class III obesity. METHODS AND FINDINGS: In a pooled analysis of 20 prospective studies from the United States, Sweden, and Australia, we estimated sex- and age-adjusted total and cause-specific mortality rates (deaths per 100,000 persons per year) and multivariable-adjusted hazard ratios for adults, aged 19-83 y at baseline, classified as obese class III (BMI 40.0-59.9 kg/m2) compared with those classified as normal weight (BMI 18.5-24.9 kg/m2). Participants reporting ever smoking cigarettes or a history of chronic disease (heart disease, cancer, stroke, or emphysema) on baseline questionnaires were excluded. Among 9,564 class III obesity participants, mortality rates were 856.0 in men and 663.0 in women during the study period (1976-2009). Among 304,011 normal-weight participants, rates were 346.7 and 280.5 in men and women, respectively. Deaths from heart disease contributed largely to the excess rates in the class III obesity group (rate differences = 238.9 and 132.8 in men and women, respectively), followed by deaths from cancer (rate differences = 36.7 and 62.3 in men and women, respectively) and diabetes (rate differences = 51.2 and 29.2 in men and women, respectively). Within the class III obesity range, multivariable-adjusted hazard ratios for total deaths and deaths due to heart disease, cancer, diabetes, nephritis/nephrotic syndrome/nephrosis, chronic lower respiratory disease, and influenza/pneumonia increased with increasing BMI. Compared with normal-weight BMI, a BMI of 40-44.9, 45-49.9, 50-54.9, and 55-59.9 kg/m2 was associated with an estimated 6.5 (95% CI: 5.7-7.3), 8.9 (95% CI: 7.4-10.4), 9.8 (95% CI: 7.4-12.2), and 13.7 (95% CI: 10.5-16.9) y of life lost. A limitation was that BMI was mainly ascertained by self-report. CONCLUSIONS: Class III obesity is associated with substantially elevated rates of total mortality, with most of the excess deaths due to heart disease, cancer, and diabetes, and major reductions in life expectancy compared with normal weight. Please see later in the article for the Editors' Summary.
PMCID:4087039
PMID: 25003901
ISSN: 1549-1277
CID: 1066322

Circulating Estrogen Metabolites and Risk of Breast Cancer in Postmenopausal Women

Arslan, Alan A; Koenig, Karen L; Lenner, Per; Afanasyeva, Yelena; Shore, Roy E; Chen, Yu; Lundin, Eva; Toniolo, Paolo; Hallmans, Goran; Zeleniuch-Jacquotte, Anne
Background: It has been hypothesized that predominance of the 2-hydroxylation estrogen metabolism pathway over the 16alpha-hydroxylation pathway may be inversely associated with breast cancer risk. Methods: We examined the associations of invasive breast cancer risk with circulating 2-OHE1, 16alpha-OHE1, and the 2-OHE1:16alpha-OHE1 ratio in a case-control study of postmenopausal women nested within two prospective cohorts: the New York University Women's Health Study (NYUWHS) and the Northern Sweden Mammary Screening Cohort (NSMSC), with adjustment for circulating levels of estrone, and additional analyses by tumor estrogen receptor (ER) status. Levels of 2-OHE1 and 16alpha-OHE1 were measured using ESTRAMET 2/16 assay in stored serum or plasma samples from 499 incident breast cancer cases and 499 controls, who were matched on cohort, age, and date of blood donation. Results: Overall, no significant associations were observed between breast cancer risk and circulating levels of 2-OHE1, 16alpha-OHE1, or their ratio in either cohort and in combined analyses. For 2-OHE1, there was evidence of heterogeneity by ER status in models adjusting for estrone (p
PMCID:4082442
PMID: 24769889
ISSN: 1055-9965
CID: 922822

A pooled analysis of waist circumference and mortality in 650,000 adults

Cerhan, James R; Moore, Steven C; Jacobs, Eric J; Kitahara, Cari M; Rosenberg, Philip S; Adami, Hans-Olov; Ebbert, Jon O; English, Dallas R; Gapstur, Susan M; Giles, Graham G; Horn-Ross, Pamela L; Park, Yikyung; Patel, Alpa V; Robien, Kim; Weiderpass, Elisabete; Willett, Walter C; Wolk, Alicja; Zeleniuch-Jacquotte, Anne; Hartge, Patricia; Bernstein, Leslie; Berrington de Gonzalez, Amy
OBJECTIVES: To assess the independent effect of waist circumference on mortality across the entire body mass index (BMI) range and to estimate the loss in life expectancy related to a higher waist circumference. PATIENTS AND METHODS: We pooled data from 11 prospective cohort studies with 650,386 white adults aged 20 to 83 years and enrolled from January 1, 1986, through December 31, 2000. We used proportional hazards regression to estimate hazard ratios (HRs) and 95% CIs for the association of waist circumference with mortality. RESULTS: During a median follow-up of 9 years (maximum, 21 years), 78,268 participants died. After accounting for age, study, BMI, smoking status, alcohol consumption, and physical activity, a strong positive linear association of waist circumference with all-cause mortality was observed for men (HR, 1.52 for waist circumferences of >/=110 vs <90 cm; 95% CI, 1.45-1.59; HR, 1.07 per 5-cm increment in waist circumference; 95% CI, 1.06-1.08) and women (HR, 1.80 for waist circumferences of >/=95 vs <70 cm; 95% CI, 1.70-1.89; HR, 1.09 per 5-cm increment in waist circumference; 95% CI, 1.08-1.09). The estimated decrease in life expectancy for highest vs lowest waist circumference was approximately 3 years for men and approximately 5 years for women. The HR per 5-cm increment in waist circumference was similar for both sexes at all BMI levels from 20 to 50 kg/m(2), but it was higher at younger ages, higher for longer follow-up, and lower among male current smokers. The associations were stronger for heart and respiratory disease mortality than for cancer. CONCLUSIONS: In white adults, higher waist circumference was positively associated with higher mortality at all levels of BMI from 20 to 50 kg/m(2). Waist circumference should be assessed in combination with BMI, even for those in the normal BMI range, as part of risk assessment for obesity-related premature mortality.
PMCID:4104704
PMID: 24582192
ISSN: 0025-6196
CID: 829592

Free beta-human chorionic gonadotropin, total human chorionic gonadotropin and maternal risk of breast cancer

Toriola, Adetunji T; Tolockiene, Egle; Schock, Helena; Surcel, Helja-Marja; Zeleniuch-Jacquotte, Anne; Wadell, Goran; Toniolo, Paolo; Lundin, Eva; Grankvist, Kjell; Lukanova, Annekatrin
Background: We investigated whether the free beta-human chorionic gonadotropin (free beta-hCG) would provide additional information to that provided by total hCG alone and thus be useful in future epidemiological studies relating hCG to maternal breast cancer risk. Materials & methods: Cases (n = 159) and controls (n = 286) were a subset of our previous study within the Northern Sweden Maternity Cohort on total hCG during primiparous pregnancy and breast cancer risk. Results: The associations between total hCG (hazard ratio: 0.79; 95% CI: 0.49-1.27), free beta-hCG (hazard ratio: 0.85; 95% CI: 0.33-2.18) and maternal risk of breast cancer were very similar in all analyses and mutual adjustment for either one had minor effects on the risk estimates. Conclusion: In the absence of a reliable assay on intact hCG, total hCG alone can be used in epidemiological studies investigating hCG and breast cancer risk, as free beta-hCG does not appear to provide any additional information.
PMCID:4143888
PMID: 24559445
ISSN: 1479-6694
CID: 829962