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Precuneal and amygdala spontaneous activity and functional connectivity in war-zone-related PTSD
Yan, Xiaodan; Lazar, Mariana; Shalev, Arieh Y; Neylan, Thomas C; Wolkowitz, Owen M; Brown, Adam D; Henn-Haase, Clare; Yehuda, Rachel; Flory, Janine D; Abu-Amara, Duna; Sodickson, Daniel K; Marmar, Charles R
Abnormality in the "fear circuitry" has been known as a major neural characteristic of posttraumatic stress disorder (PTSD). Recent studies also revealed decreased functional connectivity in the default mode network in PTSD. The present study aims to investigate, in war-zone-related PTSD, the spontaneous activity and functional connectivity of the amygdala and the precuneus, which are two representative brain regions of the two networks, respectively. Two groups of 52 male US Operation Iraqi Freedom (OIF) and Operation Enduring Freedom (OEF) veterans (PTSD vs. controls), well matched on age and ethnicity, were clinically assessed and then studied in a resting state functional magnetic resonance imaging (fMRI) procedure. Functional connectivity analysis was conducted on the resting state fMRI data with the amygdala and precuneus as seeds. Compared with controls, veterans with PTSD had lower functional connectivity in the default mode network, as well as lower amygdala-frontal functional connectivity. Both the PTSD and the control group had a significant positive precuneal-amygdala functional connectivity without a significant group difference. The magnitudes of spontaneous activity of the amygdala and the precuneus were negatively correlated in the PTSD group and showed significant quadratic relationships with the amount of emotional abuse in early life trauma. These findings may improve our understanding about the relationships between fear circuitry and the default mode network in the context of war-zone-related PTSD.
PMID: 25561375
ISSN: 0165-1781
CID: 1428912
Characterization of a dielectric phantom for high-field magnetic resonance imaging applications
Duan, Qi; Duyn, Jeff H; Gudino, Natalia; de Zwart, Jacco A; van Gelderen, Peter; Sodickson, Daniel K; Brown, Ryan
PURPOSE: In this work, a generic recipe for an inexpensive and nontoxic phantom was developed within a range of biologically relevant dielectric properties from 150 MHz to 4.5 GHz. METHODS: The recipe includes deionized water as the solvent, NaCl to primarily control conductivity, sucrose to primarily control permittivity, agar-agar to gel the solution and reduce heat diffusivity, and benzoic acid to preserve the gel. Two hundred and seventeen samples were prepared to cover the feasible range of NaCl and sucrose concentrations. Their dielectric properties were measured using a commercial dielectric probe and were fitted to a 3D polynomial to generate a recipe describing the properties as a function of NaCl concentration, sucrose concentration, and frequency. RESULTS: Results indicated that the intuitive linear and independent relationships between NaCl and conductivity and between sucrose and permittivity are not valid. A generic polynomial recipe was developed to characterize the complex relationship between the solutes and the resulting dielectric values and has been made publicly available as a web application. In representative mixtures developed to mimic brain and muscle tissue, less than 2% difference was observed between the predicted and measured conductivity and permittivity values. CONCLUSIONS: It is expected that the recipe will be useful for generating dielectric phantoms for general magnetic resonance imaging (MRI) coil development at high magnetic field strength, including coil safety evaluation as well as pulse sequence evaluation (including B1 (+) mapping, B1 (+) shimming, and selective excitation pulse design), and other non-MRI applications which require biologically equivalent dielectric properties.
PMCID:4281072
PMID: 25281973
ISSN: 0094-2405
CID: 1299002
Golden-angle radial sparse parallel MRI: Combination of compressed sensing, parallel imaging, and golden-angle radial sampling for fast and flexible dynamic volumetric MRI
Feng, Li; Grimm, Robert; Tobias Block, Kai; Chandarana, Hersh; Kim, Sungheon; Xu, Jian; Axel, Leon; Sodickson, Daniel K; Otazo, Ricardo
PURPOSE: To develop a fast and flexible free-breathing dynamic volumetric MRI technique, iterative Golden-angle RAdial Sparse Parallel MRI (iGRASP), that combines compressed sensing, parallel imaging, and golden-angle radial sampling. METHODS: Radial k-space data are acquired continuously using the golden-angle scheme and sorted into time series by grouping an arbitrary number of consecutive spokes into temporal frames. An iterative reconstruction procedure is then performed on the undersampled time series where joint multicoil sparsity is enforced by applying a total-variation constraint along the temporal dimension. Required coil-sensitivity profiles are obtained from the time-averaged data. RESULTS: iGRASP achieved higher acceleration capability than either parallel imaging or coil-by-coil compressed sensing alone. It enabled dynamic volumetric imaging with high spatial and temporal resolution for various clinical applications, including free-breathing dynamic contrast-enhanced imaging in the abdomen of both adult and pediatric patients, and in the breast and neck of adult patients. CONCLUSION: The high performance and flexibility provided by iGRASP can improve clinical studies that require robustness to motion and simultaneous high spatial and temporal resolution. Magn Reson Med, 2013. (c) 2013 Wiley Periodicals, Inc.
PMCID:3991777
PMID: 24142845
ISSN: 0740-3194
CID: 817022
The Need for Speed: Accelerating CMR Imaging Assessment of Cardiac Function [Editorial]
Axel, Leon; Sodickson, Daniel K
PMID: 25212794
ISSN: 1876-7591
CID: 1209462
Parametric analysis of the spatial resolution and signal-to-noise ratio in super-resolved spatiotemporally encoded (SPEN) MRI
Ben-Eliezer, Noam; Shrot, Yoav; Frydman, Lucio; Sodickson, Daniel K
PURPOSE: Spatiotemporally Encoded (SPEN) MRI is based on progressive point-by-point refocusing of the image in the spatial rather than the k-space domain through the use of frequency-swept radiofrequency pulses and quadratic phase profiles. This technique provides high robustness against frequency-offsets including B0 inhomogeneities and chemical-shift (e.g., fat/water) distortions, and can consequently perform fMRI at challenging regions such as the orbitofrontal cortex and the olfactory bulb, as well as to improve imaging near metallic implants. This work aims to establish a comprehensive framework for the implementation and super-resolved reconstruction of SPEN-based imaging, and to accurately quantify this method's spatial-resolution and signal-to-noise ratio (SNR). THEORY AND METHODS: A stepwise formalism was laid-out for calculating the optimal experimental parameters for SPEN, followed by analytical analysis of the ensuing SNR and spatial-resolution versus conventional k-space encoding. Predictions were then confirmed using computer simulations and experimentally. RESULTS: Our findings show that SPEN is governed by the same fundamental signal-processing principles as k-space encoding, leading to similar averaging properties, and ultimately similar spatial-resolution and SNR levels as k-space encoding. CONCLUSION: Presented analysis is applicable to general multidimensional SPEN designs and provides a unified framework for the analysis of future SPEN and similar approaches based on quadratic phase encoding. Magn Reson Med, 2013. (c) 2013 Wiley Periodicals, Inc.
PMID: 24136737
ISSN: 0740-3194
CID: 817032
Approaching Ultimate Intrinsic SNR in a Uniform Spherical Sample with Finite Arrays of Loop Coils
Vaidya, Manushka V; Sodickson, Daniel K; Lattanzi, Riccardo
We investigated to what degree and at what rate the ultimate intrinsic (UI) signal-to-noise ratio (SNR) may be approached using finite radiofrequency detector arrays. We used full-wave electromagnetic field simulations based on dyadic Green's functions to compare the SNR of arrays of loops surrounding a uniform sphere with the ultimate intrinsic SNR (UISNR), for increasing numbers of elements over a range of magnetic field strengths, voxel positions, sphere sizes, and acceleration factors. We evaluated the effect of coil conductor losses and the performance of a variety of distinct geometrical arrangements such as "helmet" and "open-pole" configurations in multiple imaging planes. Our results indicate that UISNR at the center is rapidly approached with encircling arrays and performance is substantially lower near the surface, where a quadrature detection configuration tailored to voxel position is optimal. Coil noise is negligible at high field, where sample noise dominates. Central SNR for practical array configurations such as the helmet is similar to that of close-packed arrangements. The observed trends can provide physical insights to improve coil design.
PMCID:4470621
PMID: 26097442
ISSN: 1552-5031
CID: 1640812
Joint reconstruction of simultaneously acquired MR-PET data with multi sensor compressed sensing based on a joint sparsity constraint
Knoll, Florian; Koesters, Thomas; Otazo, Ricardo; Block, Tobias; Feng, Li; Vunckx, Kathleen; Faul, David; Nuyts, Johan; Boada, Fernando; Sodickson, Daniel K
PMCID:4545956
PMID: 26501612
ISSN: 2197-7364
CID: 1816702
MRI of the hip at 7T: Feasibility of bone microarchitecture, high-resolution cartilage, and clinical imaging
Chang, Gregory; Deniz, Cem M; Honig, Stephen; Egol, Kenneth; Regatte, Ravinder R; Zhu, Yudong; Sodickson, Daniel K; Brown, Ryan
PURPOSE: To demonstrate the feasibility of performing bone microarchitecture, high-resolution cartilage, and clinical imaging of the hip at 7T. MATERIALS AND METHODS: This study had Institutional Review Board approval. Using an 8-channel coil constructed in-house, we imaged the hips of 15 subjects on a 7T magnetic resonance imaging (MRI) scanner. We applied: 1) a T1-weighted 3D fast low angle shot (3D FLASH) sequence (0.23 x 0.23 x 1-1.5 mm3 ) for bone microarchitecture imaging; 2) T1-weighted 3D FLASH (water excitation) and volumetric interpolated breath-hold examination (VIBE) sequences (0.23 x 0.23 x 1.5 mm3 ) with saturation or inversion recovery-based fat suppression for cartilage imaging; 3) 2D intermediate-weighted fast spin-echo (FSE) sequences without and with fat saturation (0.27 x 0.27 x 2 mm) for clinical imaging. RESULTS: Bone microarchitecture images allowed visualization of individual trabeculae within the proximal femur. Cartilage was well visualized and fat was well suppressed on FLASH and VIBE sequences. FSE sequences allowed visualization of cartilage, the labrum (including cartilage and labral pathology), joint capsule, and tendons. CONCLUSION: This is the first study to demonstrate the feasibility of performing a clinically comprehensive hip MRI protocol at 7T, including high-resolution imaging of bone microarchitecture and cartilage, as well as clinical imaging. J. Magn. Reson. Imaging 2013;. (c) 2013 Wiley Periodicals, Inc.
PMCID:3962810
PMID: 24115554
ISSN: 1053-1807
CID: 571382
Breast MRI at 7 Tesla with a bilateral coil and robust fat suppression
Brown, Ryan; Storey, Pippa; Geppert, Christian; McGorty, Kellyanne; Klautau Leite, Ana Paula; Babb, James; Sodickson, Daniel K; Wiggins, Graham C; Moy, Linda
PURPOSE: To develop a bilateral coil and fat suppressed T1-weighted sequence for 7 Tesla (T) breast MRI. MATERIALS AND METHODS: A dual-solenoid coil and three-dimensional (3D) T1w gradient echo sequence with B1 + insensitive fat suppression (FS) were developed. T1w FS image quality was characterized through image uniformity and fat-water contrast measurements in 11 subjects. Signal-to-noise ratio (SNR) and flip angle maps were acquired to assess the coil performance. Bilateral contrast-enhanced and unilateral high resolution (0.6 mm isotropic, 6.5 min acquisition time) imaging highlighted the 7T SNR advantage. RESULTS: Reliable and effective FS and high image quality was observed in all subjects at 7T, indicating that the custom coil and pulse sequence were insensitive to high-field obstacles such as variable tissue loading. 7T and 3T image uniformity was similar (P = 0.24), indicating adequate 7T B1 + uniformity. High 7T SNR and fat-water contrast enabled 0.6 mm isotropic imaging and visualization of a high level of fibroglandular tissue detail. CONCLUSION: 7T T1w FS bilateral breast imaging is feasible with a custom radiofrequency (RF) coil and pulse sequence. Similar image uniformity was achieved at 7T and 3T, despite different RF field behavior and variable coil-tissue interaction due to anatomic differences that might be expected to alter magnetic field patterns. J. Magn. Reson. Imaging 2013. (c) 2013 Wiley Periodicals, Inc.
PMCID:3945054
PMID: 24123517
ISSN: 1053-1807
CID: 571402
Synchronized cardiac and respiratory sparsity for rapid free-breathing cardiac cine MRI [Meeting Abstract]
Feng, L; Axel, L; Xu, J; Sodickson, D K; Otazo, R
Background: For patients with impaired breath-hold capacity or arrhythmias, free breathing real-time cine MRI is preferred at the expense of compromised spatiotemporal resolution. Compressed sensing (CS) has been used to achieve higher spatiotemporal resolutions in real-time cine MRI, but the superposition of respiratory and cardiac motion limits temporal sparsity. In this work, we propose a novel approach that sorts out cardiac and respiratory motion into separated but synchronized dimensions and performs a joint multicoil CS reconstruction with different sparsity constraints on cardiac and respiratory dimensions. Golden-angle radial sampling was employed for flexible data sorting. In arrhythmias cases, data are also sorted according to cardiac cycles with different length to reconstruct both "normal" and "ectopic" cycles. Methods: Cardiac imaging was performed on one volunteer (male age = 27) and one patient (female age = 49) with Mobitz I arrhythmia during free breathing without external gating on a 1.5T MRI scanner (Avanto, Siemens). Data were continuously acquired for 15 s in a short axis plane using a 2D golden-angle radial b-SSFP sequence. Imaging parameters were: spatial resolution = 2 x 2 mm2, TR/TE = 2.8/1.4 ms, FA = 70degree and slice thickness = 8 mm. Temporal evolution of the central k-space positions (green dots, Figure 1a) was used to estimate cardiac contraction and respiration from coil-elements close to the heart and diaphragm respectively (Figure 1b). Raw data were then sorted into an expanded dataset of images containing two dynamic dimensions, one for cardiac and the other for respiratory motion. As shown in Figure 1b, each colored rectangular block represents an individual cardiac phase from a short "snapshot" period (e.g. 13 adjacent spokes). Data were sorted first into a higher dimensional matrix using the cardiac motion signal (Figure 1c left) followed by a second sorting along the respiratory dimension from expiration to inspiration using the respiratory mot!
EMBASE:71330579
ISSN: 1097-6647
CID: 837002