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Accelerated phase-contrast cine MRI using k-t SPARSE-SENSE

Kim, Daniel; Dyvorne, Hadrien A; Otazo, Ricardo; Feng, Li; Sodickson, Daniel K; Lee, Vivian S
Phase-contrast (PC) cine MRI is a promising method for assessment of pathologic hemodynamics, including cardiovascular and hepatoportal vascular dynamics, but its low data acquisition efficiency limits the achievable spatial and temporal resolutions within clinically acceptable breath-hold durations. We propose to accelerate PC cine MRI using an approach which combines compressed sensing and parallel imaging (k-t SPARSE-SENSE). We validated the proposed 6-fold accelerated PC cine MRI against 3-fold accelerated PC cine MRI with parallel imaging (generalized autocalibrating partially parallel acquisitions). With the programmable flow pump, we simulated a time varying waveform emulating hepatic blood flow. Normalized root mean square error between two sets of velocity measurements was 2.59%. In multiple blood vessels of 12 control subjects, two sets of mean velocity measurements were in good agreement (mean difference = -0.29 cm/s; lower and upper 95% limits of agreement = -5.26 and 4.67 cm/s, respectively). The mean phase noise, defined as the standard deviation of the phase in a homogeneous stationary region, was significantly lower for k-t SPARSE-SENSE than for generalized autocalibrating partially parallel acquisitions (0.05 +/- 0.01 vs. 0.19 +/- 0.06 radians, respectively; P < 0.01). The proposed 6-fold accelerated PC cine MRI pulse sequence with k-t SPARSE-SENSE is a promising investigational method for rapid velocity measurement with relatively high spatial (1.7 mm x 1.7 mm) and temporal ( approximately 35 ms) resolutions. Magn Reson Med, 2011. (c) 2011 Wiley Periodicals, Inc.
PMCID:3306497
PMID: 22083998
ISSN: 0740-3194
CID: 162024

Interstitial fluid pressure correlates with intravoxel incoherent motion imaging metrics in a mouse mammary carcinoma model

Kim, S; Decarlo, L; Cho, GY; Jensen, JH; Sodickson, DK; Moy, L; Formenti, S; Schneider, RJ; Goldberg, JD; Sigmund, EE
The effective delivery of a therapeutic drug to the core of a tumor is often impeded by physiological barriers, such as the interstitial fluid pressure (IFP). There are a number of therapies that can decrease IFP and induce tumor vascular normalization. However, a lack of a noninvasive means to measure IFP hinders the utilization of such a window of opportunity for the maximization of the treatment response. Thus, the purpose of this study was to investigate the feasibility of using intravoxel incoherent motion (IVIM) diffusion parameters as noninvasive imaging biomarkers for IFP. Mice bearing the 4T1 mammary carcinoma model were studied using diffusion-weighted imaging (DWI), immediately followed by wick-in-needle IFP measurement. Voxelwise analysis was conducted with a conventional monoexponential diffusion model, as well as a biexponential model taking IVIM into account. There was no significant correlation of IFP with either the median apparent diffusion coefficient from the monoexponential model (r = 0.11, p = 0.78) or the median tissue diffusivity from the biexponential model (r = 0.30, p = 0.44). However, IFP was correlated with the median pseudo-diffusivity (D(p) ) of apparent vascular voxels (r = 0.76, p = 0.02) and with the median product of the perfusion fraction and pseudo-diffusivity (f(p) D(p) ) of apparent vascular voxels (r = 0.77, p = 0.02). Although the effect of IVIM in tumors has been reported previously, to our knowledge, this study represents the first direct comparison of IVIM metrics with IFP, with the results supporting the feasibility of the use of IVIM DWI metrics as noninvasive biomarkers for tumor IFP
PMCID:3883504
PMID: 22072561
ISSN: 0952-3480
CID: 160660

A simple noniterative principal component technique for rapid noise reduction in parallel MR images

Patel, Anand S; Duan, Qi; Robson, Philip M; McKenzie, Charles A; Sodickson, Daniel K
The utilization of parallel imaging permits increased MR acquisition speed and efficiency; however, parallel MRI usually leads to a deterioration in the signal-to-noise ratio when compared with otherwise equivalent unaccelerated acquisitions. At high accelerations, the parallel image reconstruction matrix tends to become dominated by one principal component. This has been utilized to enable substantial reductions in g-factor-related noise. A previously published technique achieved noise reductions via a computationally intensive search for multiples of the dominant singular vector which, when subtracted from the image, minimized joint entropy between the accelerated image and a reference image. We describe a simple algorithm that can accomplish similar results without a time-consuming search. Significant reductions in g-factor-related noise were achieved using this new algorithm with in vivo acquisitions at 1.5 T with an eight-element array.
PMCID:3170692
PMID: 21544889
ISSN: 0952-3480
CID: 157667

Specific absorption rate benefits of including measured electric field interactions in parallel excitation pulse design

Deniz, Cem Murat; Alon, Leeor; Brown, Ryan; Sodickson, Daniel K; Zhu, Yudong
Specific absorption rate management and excitation fidelity are key aspects of radiofrequency pulse design for parallel transmission at ultra-high magnetic field strength. The design of radiofrequency pulses for multiple channels is often based on the solution of regularized least-squares optimization problems for which a regularization term is typically selected to control the integrated or peak pulse waveform amplitude. Unlike single-channel transmission, the specific absorption rate of parallel transmission is significantly influenced by interferences between the electric fields associated with the individual transmission elements, which a conventional regularization term does not take into account. This work explores the effects upon specific absorption rate of incorporating experimentally measurable electric field interactions into parallel transmission pulse design. Results of numerical simulations and phantom experiments show that the global specific absorption rate during parallel transmission decreases when electric field interactions are incorporated into pulse design optimization. The results also show that knowledge of electric field interactions enables robust prediction of the net power delivered to the sample or subject by parallel radiofrequency pulses before they are played out on a scanner. Magn Reson Med, 2011. (c) 2011 Wiley-Liss, Inc
PMCID:3245373
PMID: 22135040
ISSN: 1522-2594
CID: 147689

Single breathhold noncontrast thoracic MRA using highly accelerated parallel imaging with a 32-element coil array

Xu J; McGorty KA; Lim RP; Bruno M; Babb JS; Srichai MB; Kim D; Sodickson DK
PURPOSE: To evaluate the feasibility of performing single breathhold three-dimensional (3D) thoracic noncontrast MR angiography (NC-MRA) using highly accelerated parallel imaging. MATERIALS AND METHODS: We developed a single breathhold NC MRA pulse sequence using balanced steady state free precession (SSFP) readout and highly accelerated parallel imaging. In 17 subjects, highly accelerated noncontrast MRA was compared against electrocardiogram-triggered contrast-enhanced MRA. Anonymized images were randomized for blinded review by two independent readers for image quality, artifact severity in eight defined vessel segments and aortic dimensions in six standard sites. NC-MRA and CE-MRA were compared in terms of these measures using paired sample t- and Wilcoxon tests. RESULTS: The overall image quality (3.21 +/- 0.68 for NC-MRA versus 3.12 +/- 0.71 for CE-MRA) and artifact (2.87 +/- 1.01 for NC-MRA versus 2.92 +/- 0.87 for CE-MRA) scores were not significantly different, but there were significant differences for the great vessel and coronary artery origins. NC-MRA demonstrated significantly lower aortic diameter measurements compared with CE-MRA; however, this difference was not considered clinically relevant (>3 mm difference) for less than 12% of segments, most commonly at the sinotubular junction. Mean total scan time was significantly lower for NC-MRA compared with CE-MRA (18.2 +/- 6.0 s versus 28.1 +/- 5.4 s, respectively; P < 0.05). CONCLUSION: Single breathhold NC-MRA is feasible and can be a useful alternative for evaluation and follow-up of thoracic aortic diseases. J. Magn. Reson. Imaging 2011;. (c) 2011 Wiley Periodicals, Inc
PMCID:3305853
PMID: 22147589
ISSN: 1522-2586
CID: 149833

Articular Cartilage: In Vivo Diffusion-Tensor Imaging

Raya JG; Horng A; Dietrich O; Krasnokutsky S; Beltran LS; Storey P; Reiser MF; Recht MP; Sodickson DK; Glaser C
Purpose:To investigate technical feasibility, test-retest reproducibility, and the ability to differentiate healthy subjects from subjects with osteoarthritis (OA) with diffusion-tensor (DT) imaging parameters and T2 relaxation time.Materials and Methods:This study was approved by the institutional review board and was HIPAA compliant. All subjects provided written informed consent. DT imaging parameters and T2 (resolution = 0.6 x 0.6 x 2 mm) of patellar cartilage were measured at 7.0 T in 16 healthy volunteers and 10 patients with OA with subtle inhomogeneous signal intensity but no signs of cartilage erosion at clinical magnetic resonance (MR) imaging. Ten volunteers were imaged twice to determine test-retest reproducibility. After cartilage segmentation, maps of mean apparent diffusion coefficient (ADC), fractional anisotropy (FA), and T2 relaxation time were calculated. Differences for ADC, FA, and T2 between the healthy and OA populations were assessed with nonparametric tests. The ability of each MR imaging parameter to help discriminate healthy subjects from subjects with OA was assessed by using receiver operating characteristic curve analysis.Results:Test-retest reproducibility was better than 10% for mean ADC (8.1%), FA (9.7%), and T2 (5.9%). Mean ADC and FA differed significantly (P < .01) between the OA and healthy populations, but T2 did not. For ADC, the optimal threshold to differentiate both populations was 1.2 x 10(-3) mm(2)/sec, achieving specificity of 1.0 (16 of 16) and sensitivity of 0.80 (eight of 10). For FA, the optimal threshold was 0.25, yielding specificity of 0.88 (14 of 16) and sensitivity of 0.80 (eight of 10). T2 showed poor differentiation between groups (optimal threshold = 22.9 msec, specificity = 0.69 [11 of 16], sensitivity = 0.60 [six of 10]).Conclusion:In vivo DT imaging of patellar cartilage is feasible, has good test-retest reproducibility, and may be accurate in discriminating healthy subjects from subjects with OA. ADC and FA are two promising biomarkers for early OA.(c) RSNA, 2011
PMID: 22106350
ISSN: 1527-1315
CID: 149837

System and SAR characterization in parallel RF transmission

Zhu Y; Alon L; Deniz CM; Brown R; Sodickson DK
The markedly increased degrees of freedom introduced by parallel radiofrequency transmission presents both opportunities and challenges for specific absorption rate (SAR) management. On one hand they enable E-field tailoring and SAR reduction while facilitating excitation profile control. On other hand they increase the complexity of SAR behavior and the risk of inadvertently exacerbating SAR by improper design or playout of radiofrequency pulses. The substantial subject-dependency of SAR in high field magnetic resonance can be a compounding factor. Building upon a linear system concept and a calibration scheme involving a finite number of in situ measurements, this work establishes a clinically applicable method for characterizing global SAR behavior as well as channel-by-channel power transmission. The method offers a unique capability of predicting, for any excitation, the SAR and power consequences that are specific to the subject to be scanned and the MRI hardware. The method was validated in simulation and experimental studies, showing promise as the foundation to a prospective paradigm where power and SAR are not only monitored but, through prediction-guided optimization, proactively managed. Magn Reson Med, 2011. (c) 2011 Wiley Periodicals, Inc
PMCID:3299876
PMID: 22139808
ISSN: 1522-2594
CID: 149834

Ideal current patterns yielding optimal signal-to-noise ratio and specific absorption rate in magnetic resonance imaging: Computational methods and physical insights

Lattanzi R; Sodickson DK
At high and ultra-high magnetic field strengths, understanding interactions between tissues and the electromagnetic fields generated by radiofrequency coils becomes crucial for safe and effective coil design as well as for insight into limits of performance. In this work, we present a rigorous electrodynamic modeling framework, using dyadic Green's functions, to derive the electromagnetic field in homogeneous spherical and cylindrical samples resulting from arbitrary surface currents in the presence or absence of a surrounding radiofrequency shield. We show how to calculate ideal current patterns that result in the highest possible signal-to-noise ratio (ultimate intrinsic signal-to-noise ratio) or the lowest possible radiofrequency power deposition (ultimate intrinsic specific absorption rate) compatible with electrodynamic principles. We identify familiar coil designs within optimal current patterns at low to moderate field strength, thereby establishing and explaining graphically the near-optimality of traditional surface and volume quadrature designs. We also document the emergence of less familiar patterns, e.g., involving substantial electric- as well as magnetic-dipole contributions, at high field strength. Performance comparisons with particular coil array configurations demonstrate that optimal performance may be approached with finite arrays if ideal current patterns are used as a guide for coil design. Magn Reson Med, 2011. (c) 2011 Wiley Periodicals, Inc
PMCID:3374920
PMID: 22127735
ISSN: 1522-2594
CID: 149835

A versatile flow phantom for intravoxel incoherent motion MRI

Cho GY; Kim S; Jensen JH; Storey P; Sodickson DK; Sigmund EE
Although there have been many advancements in cancer research, much is still unknown about the heterogeneous tumor microenvironment. Diffusion-weighted MRI has proven to be a viable and versatile microstructural probe. Diffusion-weighted sequences specifically sensitive to intravoxel incoherent motion (IVIM) have seen a recent resurgence of interest as they promise to provide a valuable window on the vascular microenvironment. To understand, test, and optimize IVIM-sensitive approaches, a complex flow phantom was constructed to mimic certain characteristics of the tumor microenvironment such as tortuous microvasculature, heterogeneous vascular permeability, and interstitial fluid pressure buildup. Results using this phantom on a clinical scanner platform confirmed IVIM sensitivity to microscopic flow effects. Biexponential fitting of signal decay curves enabled quantitative extraction of perfusion fraction, IVIM-related pseudodiffusivity, and tissue diffusivity. Parametric maps were also generated, illustrating the potential utility of IVIM-sensitive imaging in clinical settings. The flow phantom proved to be an effective test-bed for validating and optimizing the IVIM-MRI technique to provide surrogate markers for microvascular properties. Magn Reson Med, 2011. (c) 2011 Wiley Periodicals, Inc
PMID: 22114007
ISSN: 1522-2594
CID: 149836

Exploiting sparsity to accelerate noncontrast MR angiography in the context of parallel imaging

Storey P; Otazo R; Lim RP; Kim S; Fleysher L; Oesingmann N; Lee VS; Sodickson DK
Noncontrast techniques for peripheral MR angiography are receiving renewed interest because of safety concerns about the use of gadolinium in patients with renal insufficiency. One class of techniques involves subtraction of dark-blood images acquired during fast systolic flow from bright-blood images obtained during slow diastolic flow. The goal of this work was to determine whether the inherent sparsity of the difference images could be exploited to achieve greater acceleration without loss of image quality in the context of generalized autocalibrating partially parallel acquisition (GRAPPA). It is shown that noise amplification at high acceleration factors can be reduced by performing subtraction on the raw data, before calculation of the GRAPPA weights, rather than on the final magnitude images. Use of the difference data to calculate the GRAPPA weights decreases the geometry factor (g-factor), because the difference data represent a sparse image set. This demonstrates an inherent property of GRAPPA and does not require the use of compressed sensing. Application of this approach to highly accelerated data from healthy volunteers resulted in similar depiction of large arteries to that obtained with low acceleration and standard reconstruction. However, visualization of very small vessels and arterial branches was compromised. Magn Reson Med, 2011. (c) 2011 Wiley-Liss, Inc
PMCID:3291797
PMID: 22081482
ISSN: 1522-2594
CID: 149838