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Fourier transform infrared (FTIR) spectral mapping of the cervical transformation zone, and dysplastic squamous epithelium
Wood, B R; Chiriboga, L; Yee, H; Quinn, M A; McNaughton, D; Diem, M
OBJECTIVES: This paper is aimed at establishing infrared spectral patterns for the different tissue types found in, and for different stages of disease of squamous cervical epithelium. Methods for the unsupervised distinction of these tissue types are discussed. METHODS: Fourier transform infrared (FTIR) maps of the squamous and glandular cervical epithelium, and of the cervical transformation zone, were obtained and analyzed by multivariate unsupervised hierarchical cluster methods. The resulting clusters are correlated to the corresponding stained histopathological features in the tissue sections. RESULTS: Multivariate statistical analysis of FTIR spectra collected for tissue sections permit an unsupervised method of distinguishing tissue types, and of differentiating between normal and diseased tissue. By analyzing different spectral windows and comparing the results with histology, we found the amide I and II region (1740-1470 cm(-1)) to be very important in correlating anatomical and histopathological features in tissue to spectral clusters. Since an unsupervised, rather than a diagnostic, algorithm was used in these efforts, no statistical analysis of false-positive/false-negative results is reported at this time. CONCLUSIONS: The combination of FTIR micro-spectroscopy and multivariate spectral processing provides important insights into the fundamental spectral signatures of individual cells and consequently shows potential as a diagnostic tool for cervical cancer
PMCID:2732436
PMID: 15047215
ISSN: 0090-8258
CID: 46214
Peripheral CD4/CD8 double-positive T cells are hepatitis C virus-specific effector memory cells [Meeting Abstract]
Nascimbeni, M; Shin, EC; Chiriboga, L; Kleiner, DE; Rehermann, B
ISI:000220470700217
ISSN: 0892-6638
CID: 46622
Peripheral blood and intrahepatic CD4/CD8 double positive cells in hepatitis C virus infection [Meeting Abstract]
Nascimbeni, M; Shin, EC; Chiriboga, L; Kleiner, DE; Rehermann, B
ISI:000185816700629
ISSN: 0270-9139
CID: 55387
Infrared spectral features of exfoliated cervical cells, cervical adenocarcinoma tissue, and an adenocarcinoma cell line (SiSo). By Neviliappan S, et al [Letter]
Chiriboga, Luis; Yee, Herman; Diem, Max; Wood, Bayden
PMID: 14529695
ISSN: 0090-8258
CID: 63271
Regeneration of hepatocyte 'buds' in cirrhosis from intrabiliary stem cells
Falkowski, Olga; An, Hee Jung; Ianus, I Andreea; Chiriboga, Luis; Yee, Herman; West, A Brian; Theise, Neil D
BACKGROUND/AIMS: In massive hepatic necrosis, hepatic stem cells constitute a canal of Hering derived, cytokeratin 19 (CK19) positive 'ductular reaction' (DR). Whether DRs in cirrhosis are activated stem cells (so called 'buds') or biliary metaplasia of cholestatic, injured hepatocytes is still debated. We investigate derivation of intraseptal hepatocytes (ISHs) from DRs and from the biliary tree in cirrhosis. METHODS: Explants of hepatitis B and C, alcohol, primary biliary cirrhosis and primary sclerosing cholangitis-related cirrhosis were examined. ISHs were quantified and their associations with DRs and cholestasis recorded. 3D-reconstruction of ISHs and nearby bile ducts was performed in blocks from hepatitis C and primary sclerosing cholangitis cirrhosis. RESULTS: Seven hundred seventy five/830 (94%) ISHs were associated with CK19 positive DRs. ISHs without ductular reactions were more likely to show cholestatic features (P<0.0001). In 3D, ISHs were seen to bud directly from the biliary tree. In summary: ISHs: (1) are usually associated with stem cell-like DRs; (2) are rarely cholestatic, leaving the associated DRs unexplained; and (3) are linked to the biliary tree in 3D. Dynamic proliferation rates in hepatitis C over time suggest that hepatocyte replication diminishes in late stages, with an associated activation of the biliary stem cell compartment. CONCLUSIONS: We therefore suggest that the biliary tree, from at least its smaller branches up to the canals of Hering, are composed of or at least harbor facultative hepatic stem cells, and that ISH largely represent 'buds' of newly formed hepatocytes
PMID: 12927921
ISSN: 0168-8278
CID: 44977
Infrared spectroscopy of cultured cells - II. Spectra of exponentially growing, serum-deprived and confluent cells [Meeting Abstract]
Pacifico, A; Chiriboga, LA; Lasch, P; Diem, M
Infrared microspectroscopy (IR-MSP) is a spectroscopic technique that is able to monitor cell differentiation, maturation, and progression through the cell cycle. In order to establish this technique as a diagnostic tool in cellular biology and pharmacology, spectral patterns indicative of the stages of cell proliferation need to be collected. Thus, we have embarked on a systematic study of the effects of cell division and cell cycle progression on the infrared spectra of cells. In this paper, we modulated the level of cell proliferation and report the effects of this modulation on the observed infrared spectra of the cells. The modulation was achieved by serum deprivation of the growing cells, or by having the cell culture reach confluence. The progression of the cells through the cell cycle was monitored via flow cytometry, and correlated with changes in IR-MSP features in the spectral signatures due to nucleic acids (1250-1000 cm(-1)). In both these experiments, the majority of cells are in the G0/G1 stages,(3) with only a small percentage in the S and G2 phases. Nevertheless. spectral differences could be observed and interpreted in terms of the spectral changes of cellular DNA. (C) 2003 Published by Elsevier Science B.V
ISI:000184513800011
ISSN: 0924-2031
CID: 55546
The use of cytochemical and immunocytochemical stains in distinguishing cirrhotic nodules from hepatocellular carcinoma on fine needle aspiration biopsy [Meeting Abstract]
Cangiarella, J; Tong, G; Theise, N; Yee, H; Chiriboga, L; Simsir, A
ISI:000180732500279
ISSN: 0023-6837
CID: 37142
The use of cytochemical and immunocytochemical stains in distinguishing cirrhotic nodules from hepatocellular carcinoma on fine needle aspiration biopsy [Meeting Abstract]
Cangiarella, J; Tong, G; Theise, N; Yee, H; Chiriboga, L; Simsir, A
ISI:000180720100278
ISSN: 0893-3952
CID: 38512
Green fluorescent protein immunohistochemistry as a novel experimental tool for the detection of glioma cell invasion in vivo
Zagzag, David; Miller, Douglas C; Chiriboga, Luis; Yee, Herman; Newcomb, Elizabeth W
In vivo animal models of primary brain tumors are necessary to advance knowledge related to the complex interactions between glioma cells and the adjacent brain. A cardinal feature of glioma growth, and a major reason why neurosurgical and adjunctive therapies ultimately fail in most patients is their invasive properties. We have adapted a previously described animal model developed by one of us to give better histological detail while preserving the identification of single infiltrating glioma cells. GL261 glioma cells were first transfected with the plasmid encoding green fluorescent protein (GFP) and then implanted into the brains of syngeneic C57BL/6 mice. Identification of GFP-positive tumor cells in paraffin sections of the brains of tumor-bearing animals utilized an antibody for conventional immunoperoxidase immunohistochemistry. This method is a more powerful technique compared with the prior use of frozen sections and fluorescence microscopy to identify GFP-tagged tumor cells. We find that this new method provides improved morphology and proves to be a sensitive and reliable system for detection of invading glioma cells. Using this methodology with other advanced technologies (eg, laser capture microdissection) holds out the promise of helping to elucidate the molecular mechanisms of glioma cell infiltration and invasion into the surrounding brain
PMID: 12580543
ISSN: 1015-6305
CID: 34732
Hepatic stellate cell activation, hepatic stellate cell and hepatocyte proliferation and apoptosis in liver biopsies from individuals with HCV, steatohepatitis, and HCV steatohepatitis [Meeting Abstract]
Canchis, PW; Talal, AH; Jacobson, IM; Russo, MW; Davila, J; Teixeira, AA; Chiriboga, L; Yee, H; Fiel, MI
ISI:000178301700442
ISSN: 0270-9139
CID: 36603