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Assessing the qualitative and quantitative impacts of simple two-class vs multiple tissue-class MR-based attenuation correction for cardiac PET/MR
Robson, Philip M; Vergani, Vittoria; Benkert, Thomas; Trivieri, Maria Giovanna; Karakatsanis, Nicolas A; Abgral, Ronan; Dweck, Marc R; Moreno, Pedro R; Kovacic, Jason C; Block, Kai Tobias; Fayad, Zahi A
BACKGROUND:Hybrid PET/MR imaging has significant potential in cardiology due to its combination of molecular PET imaging and cardiac MR. Multi-tissue-class MR-based attenuation correction (MRAC) is necessary for accurate PET quantification. Moreover, for thoracic PET imaging, respiration is known to lead to misalignments of MRAC and PET data that result in PET artifacts. These factors can be addressed by using multi-echo MR for tissue segmentation and motion-robust or motion-gated acquisitions. However, the combination of these strategies is not routinely available and can be prone to errors. In this study, we examine the qualitative and quantitative impacts of multi-class MRAC compared to a more widely available simple two-class MRAC for cardiac PET/MR. METHODS AND RESULTS/RESULTS:In a cohort of patients with cardiac sarcoidosis, we acquired MRAC data using multi-echo radial gradient-echo MR imaging. Water-fat separation was used to produce attenuation maps with up to 4 tissue classes including water-based soft tissue, fat, lung, and background air. Simultaneously acquired 18F-fluorodeoxyglucose PET data were subsequently reconstructed using each attenuation map separately. PET uptake values were measured in the myocardium and compared between different PET images. The inclusion of lung and subcutaneous fat in the MRAC maps significantly affected the quantification of 18F-fluorodeoxyglucose activity in the myocardium but only moderately altered the appearance of the PET image without introduction of image artifacts. CONCLUSION/CONCLUSIONS:Optimal MRAC for cardiac PET/MR applications should include segmentation of all tissues in combination with compensation for the respiratory-related motion of the heart. Simple two-class MRAC is adequate for qualitative clinical assessment.
PMID: 31898004
ISSN: 1532-6551
CID: 4251762
How to Implement AI in the Clinical Enterprise: Opportunities and Lessons Learned
Lui, Yvonne W; Geras, Krzysztof; Block, K Tobias; Parente, Marc; Hood, Joseph; Recht, Michael P
PMID: 33153543
ISSN: 1558-349x
CID: 4671212
Golden-Angle Radial Sparse Parallel (GRASP) MRI differentiates head & neck paragangliomas from schwannomas
Demerath, T; Blackham, K; Anastasopoulos, C; Block, K T; Stieltjes, B; Schubert, T
PURPOSE/OBJECTIVE:The aim of this study was to demonstrate the value of DCE MRI with high spatiotemporal resolution (GRASP) for differentiating paragangliomas and schwannomas in the head and neck. METHODS:) analysis, and (2) voxel-based mapping and qualitative and semiquantitative perfusion modeling based on reconstructions with a Tres of 1.6 s. Additionally, GRASP perfusion analysis was performed in another set of 5 patients with presumed cervical paragangliomas (n = 3) and schwannomas (n = 2) based on conventional imaging criteria and was correlated with conventional imaging findings. Due to the small sample size, both groups were compared qualitatively. RESULTS:In the time intensity curve classification of 4D GRASP reconstructions (Tres 4.1 s), biopsy proven paragangliomas were consistently characterized by a type-III rapid inflow wash-out pattern, compared to a type-I inflow pattern in the schwannoma group. In both temporal resolutions, semiquantitative analysis of time intensity curves demonstrated rapid wash-in, wash-out, and higher peak signal intensities in paragangliomas compared to schwannomas. In 5 presumed (non-biopsy-proven) paragangliomas and schwannomas, time intensity curves improved diagnostic certainty. CONCLUSIONS:Visual time intensity curve classification and semi-quantitative analysis of GRASP-MRI were, in this small retrospective series, sufficient to differentiate cervical paragangliomas from schwannomas. Utilization of this technique may further improve diagnostic confidence in lesions lacking conventional imaging features.
PMID: 32335122
ISSN: 1873-5894
CID: 4427632
Free-breathing fat and R 2 * quantification in the liver using a stack-of-stars multi-echo acquisition with respiratory-resolved model-based reconstruction
Schneider, Manuel; Benkert, Thomas; Solomon, Eddy; Nickel, Dominik; Fenchel, Matthias; Kiefer, Berthold; Maier, Andreas; Chandarana, Hersh; Block, Kai Tobias
PMID: 32301168
ISSN: 1522-2594
CID: 4383802
Highly accelerated, real-time phase-contrast MRI using radial k-space sampling and GROG-GRASP reconstruction: a feasibility study in pediatric patients with congenital heart disease
Haji-Valizadeh, Hassan; Feng, Li; Ma, Liliana E; Shen, Daming; Block, Kai Tobias; Robinson, Joshua D; Markl, Michael; Rigsby, Cynthia K; Kim, Daniel
Retrospective electrocardiogram-gated, 2D phase-contrast (PC) flow MRI is routinely used in clinical evaluation of valvular/vascular disease in pediatric patients with congenital heart disease (CHD). In patients not requiring general anesthesia, clinical standard PC is conducted with free breathing for several minutes per slice with averaging. In younger patients under general anesthesia, clinical standard PC is conducted with breath-holding. One approach to overcome this limitation is using either navigator gating or self-navigation of respiratory motion, at the expense of lengthening scan times. An alternative approach is using highly accelerated, free-breathing, real-time PC (rt-PC) MRI, which to date has not been evaluated in CHD patients. The purpose of this study was to develop a 38.4-fold accelerated 2D rt-PC pulse sequence using radial k-space sampling and compressed sensing with 1.5 × 1.5 × 6.0 mm3 nominal spatial resolution and 40 ms nominal temporal resolution, and evaluate whether it is capable of accurately measuring flow in 17 pediatric patients (aortic valve, pulmonary valve, right and left pulmonary arteries) compared with clinical standard 2D PC (either breath-hold or free breathing). For clinical translation, we implemented an integrated reconstruction pipeline capable of producing DICOMs of the order of 2 min per time series (46 frames). In terms of association, forward volume, backward volume, regurgitant fraction, and peak velocity at peak systole measured with standard PC and rt-PC were strongly correlated (R2 > 0.76; P < 0.001). Compared with clinical standard PC, in terms of agreement, forward volume (mean difference = 1.4% (3.0% of mean)) and regurgitant fraction (mean difference = -2.5%) were in good agreement, whereas backward volume (mean difference = -1.1 mL (28.2% of mean)) and peak-velocity at peak systole (mean difference = -21.3 cm/s (17.2% of mean)) were underestimated by rt-PC. This study demonstrates that the proposed rt-PC with the said spatial resolution and temporal resolution produces relatively accurate forward volumes and regurgitant fractions but underestimates backward volumes and peak velocities at peak systole in pediatric patients with CHD.
PMID: 31977117
ISSN: 1099-1492
CID: 4274052
Magnetization transfer in magnetic resonance fingerprinting
Hilbert, Tom; Xia, Ding; Block, Kai Tobias; Yu, Zidan; Lattanzi, Riccardo; Sodickson, Daniel K; Kober, Tobias; Cloos, Martijn A
PURPOSE/OBJECTIVE:To study the effects of magnetization transfer (MT, in which a semi-solid spin pool interacts with the free pool), in the context of magnetic resonance fingerprinting (MRF). METHODS: RESULTS:values (~47 ms vs. ~35 ms) can be observed in white matter if MT is accounted for. CONCLUSION/CONCLUSIONS:with MRF. A model that encompasses MT effects can improve the accuracy of estimated relaxation parameters and allows quantification of the fractional pool size.
PMID: 31762101
ISSN: 1522-2594
CID: 4215582
Volumetric multicomponent T1Ï relaxation mapping of the human liver under free breathing at 3T
Sharafi, Azadeh; Baboli, Rahman; Zibetti, Marcelo; Shanbhogue, Krishna; Olsen, Sonja; Block, Tobias; Chandarana, Hersh; Regatte, Ravinder
PURPOSE/OBJECTIVE:-RAVE) and to evaluate the multi relaxation components in the liver of healthy controls and chronic liver disease (CLD) patients. METHODS:components among patients (n = 3) and a control group (n = 10). RESULTS:relaxation time measurement relative to the reference on 2 different scanners. The coefficient of variation for test-retest scans performed on the same scanner was 5.7% and 2.4% for scans performed on 2 scanners. The comparison between healthy controls and CLD patients showed a significant difference (P < .05) in mono relaxation time (P = .002), stretched-exponential relaxation parameter (P = .04). The Akaike information criteria C criterion showed 2.53 ± 0.9% (2.3 ± 0.3% for CLD) of the voxels are bi-exponential while in 65.3 ± 5.8% (81.2 ± 0.06% for CLD) of the liver voxels, the stretched-exponential model was preferred. CONCLUSION/CONCLUSIONS:assessment of the liver during free breathing and can distinguish between healthy volunteers and CLD patients.
PMID: 31724246
ISSN: 1522-2594
CID: 4185622
The discrete Fourier transform for golden angle linogram sampling
Helou, Elias S.; Zibetti, Marcelo V. W.; Axel, Leon; Block, Kai Tobias; Regatte, Ravinder R.; Herman, Gabor T.
ISI:000499910200001
ISSN: 0266-5611
CID: 4228192
Volumetric multicomponent T-1 rho relaxation mapping of the human liver under free breathing at 3T
Sharafi, Azadeh; Baboli, Rahman; Zibetti, Marcelo; Shanbhogue, Krishna; Olsen, Sonja; Block, Tobias; Chandarana, Hersh; Regatte, Ravinder
ISI:000496286600001
ISSN: 0740-3194
CID: 4221632
Dynamic Contrast-Enhanced MRI to Differentiate Parotid Neoplasms Using Golden-Angle Radial Sparse Parallel Imaging
Mogen, J L; Block, K T; Bansal, N K; Patrie, J T; Mukherjee, S; Zan, E; Hagiwara, M; Fatterpekar, G M; Patel, S H
BACKGROUND AND PURPOSE/OBJECTIVE:Conventional imaging frequently shows overlapping features between benign and malignant parotid neoplasms. We investigated dynamic contrast-enhanced MR imaging using golden-angle radial sparse parallel imaging in differentiating parotid neoplasms. MATERIALS AND METHODS/METHODS:= 32) combined semiquantitative time-intensity curve metrics with ADC values. RESULTS:< .001). CONCLUSIONS:Golden-angle radial sparse parallel MR imaging allows high spatial and temporal resolution permeability characterization of parotid neoplasms, with a high negative predictive value for malignancy prediction. Combining time-to-maximum and ADC improves pleomorphic adenoma prediction compared with either metric alone.
PMID: 31048300
ISSN: 1936-959x
CID: 3854922