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Utilization of Machine Learning-Based Computer Vision and Voice Analysis to Derive Digital Biomarkers of Cognitive Functioning in Trauma Survivors
Schultebraucks, Katharina; Yadav, Vijay; Galatzer-Levy, Isaac R
Background/UNASSIGNED:Alterations in multiple domains of cognition have been observed in individuals who have experienced a traumatic stressor. These domains may provide important insights in identifying underlying neurobiological dysfunction driving an individual's clinical response to trauma. However, such assessments are burdensome, costly, and time-consuming. To overcome barriers, efforts have emerged to measure multiple domains of cognitive functioning through the application of machine learning (ML) models to passive data sources. Methods/UNASSIGNED:We utilized automated computer vision and voice analysis methods to extract facial, movement, and speech characteristics from semi-structured clinical interviews in 81 trauma survivors who additionally completed a cognitive assessment battery. A ML-based regression framework was used to identify variance in visual and auditory measures that relate to multiple cognitive domains. Results/UNASSIGNED:= 0.63), consistent with the high test-retest reliability of traditional cognitive assessments. Face, voice, speech content, and movement have all significantly contributed to explaining the variance in predicting functioning in all cognitive domains. Conclusions/UNASSIGNED:The results demonstrate the feasibility of automated measurement of reliable proxies of cognitive functioning through low-burden passive patient evaluations. This makes it easier to monitor cognitive functions and to intervene earlier and at a lower threshold without requiring a time-consuming neurocognitive assessment by, for instance, a licensed psychologist with specialized training in neuropsychology.
PMCID:7879325
PMID: 33615118
ISSN: 2504-110x
CID: 4793312
Forecasting individual risk for long-term Posttraumatic Stress Disorder in emergency medical settings using biomedical data: A machine learning multicenter cohort study
Schultebraucks, Katharina; Sijbrandij, Marit; Galatzer-Levy, Isaac; Mouthaan, Joanne; Olff, Miranda; van Zuiden, Mirjam
The necessary requirement of a traumatic event preceding the development of Posttraumatic Stress Disorder, theoretically allows for administering preventive and early interventions in the early aftermath of such events. Machine learning models including biomedical data to forecast PTSD outcome after trauma are highly promising for detection of individuals most in need of such interventions. In the current study, machine learning was applied on biomedical data collected within 48 h post-trauma to forecast individual risk for long-term PTSD, using a multinominal approach including the full spectrum of common PTSD symptom courses within one prognostic model for the first time. N = 417 patients (37.2% females; mean age 46.09 ± 15.88) admitted with (suspected) serious injury to two urban Academic Level-1 Trauma Centers were included. Routinely collected biomedical information (endocrine measures, vital signs, pharmacotherapy, demographics, injury and trauma characteristics) upon ED admission and subsequent 48 h was used. Cross-validated multi-nominal classification of longitudinal self-reported symptom severity (IES-R) over 12 months and bimodal classification of clinician-rated PTSD diagnosis (CAPS-IV) at 12 months post-trauma was performed using extreme Gradient Boosting and evaluated on hold-out sets. SHapley Additive exPlanations (SHAP) values were used to explain the derived models in human-interpretable form. Good prediction of longitudinal PTSD symptom trajectories (multiclass AUC = 0.89) and clinician-rated PTSD at 12 months (AUC = 0.89) was achieved. Most relevant prognostic variables to forecast both multinominal and dichotomous PTSD outcomes included acute endocrine and psychophysiological measures and hospital-prescribed pharmacotherapy. Thus, individual risk for long-term PTSD was accurately forecasted from biomedical information routinely collected within 48 h post-trauma. These results facilitate future targeted preventive interventions by enabling future early risk detection and provide further insights into the complex etiology of PTSD.
PMCID:7843920
PMID: 33553513
ISSN: 2352-2895
CID: 4779312
Digital measurement of mental health: Challenges, promises, and future directions
Abbas, Anzar; Schultebraucks, Katharina; Galatzer-Levy, Isaac R.
Digital health technologies are advancing characterization of mental health and functioning using objective, sensitive, and scalable tools for measurement of disease. These efforts directly address well-documented issues with traditional clinical assessments of psychiatric functioning, which can be burdensome, subjective, and insensitive to change. In this article, we highlight novel approaches for digital phenotyping of mental health. Each approach is categorized by the way biomarker data are collected, focusing on passive monitoring, active assessment, individual self-report, and biological measurement. Common challenges faced by each of these approaches are discussed, including pathways to validation, regulatory approval, and integration into patient care and clinical research. Finally, we present our perspective on the promise of such technology, focusing on how integration of independent digital measurement tools into a common technological infrastructure would allow for highly accurate, multimodal machine learning models for unprecedented objective measurement of mental health.
SCOPUS:85099767648
ISSN: 0048-5713
CID: 4770532
Accuracy of machine learning-based prediction of medication adherence in clinical research
Koesmahargyo, Vidya; Abbas, Anzar; Zhang, Li; Guan, Lei; Feng, Shaolei; Yadav, Vijay; Galatzer-Levy, Isaac R
Medication non-adherence represents a significant barrier to treatment efficacy. Remote, real-time measurement of medication dosing can facilitate dynamic prediction of risk for medication non-adherence, which in-turn allows for proactive clinical intervention to optimize health outcomes. We examine the accuracy of dynamic prediction of non-adherence using data from remote real-time measurements of medication dosing. Participants across a large set of clinical trials (n = 4,182) were observed via a smartphone application that video records patients taking their prescribed medication. The patients' primary diagnosis, demographics, and prior indication of observed adherence/non-adherence were utilized to predict (1) adherence rates ≥ 80% across the clinical trial, (2) adherence ≥ 80% for the subsequent week, and (3) adherence the subsequent day using machine learning-based classification models. Empirically observed adherence was demonstrated to be the strongest predictor of future adherence/non-adherence. Collectively, the classification models accurately predicted adherence across the trial (AUC = 0.83), the subsequent week (AUC = 0.87) and the subsequent day (AUC = 0.87). Real-time measurement of dosing can be utilized to dynamically predict medication adherence with high accuracy.
PMID: 33242836
ISSN: 1872-7123
CID: 4702452
Deep learning-based classification of posttraumatic stress disorder and depression following trauma utilizing visual and auditory markers of arousal and mood
Schultebraucks, Katharina; Yadav, Vijay; Shalev, Arieh Y; Bonanno, George A; Galatzer-Levy, Isaac R
BACKGROUND:Visual and auditory signs of patient functioning have long been used for clinical diagnosis, treatment selection, and prognosis. Direct measurement and quantification of these signals can aim to improve the consistency, sensitivity, and scalability of clinical assessment. Currently, we investigate if machine learning-based computer vision (CV), semantic, and acoustic analysis can capture clinical features from free speech responses to a brief interview 1 month post-trauma that accurately classify major depressive disorder (MDD) and posttraumatic stress disorder (PTSD). METHODS:N = 81 patients admitted to an emergency department (ED) of a Level-1 Trauma Unit following a life-threatening traumatic event participated in an open-ended qualitative interview with a para-professional about their experience 1 month following admission. A deep neural network was utilized to extract facial features of emotion and their intensity, movement parameters, speech prosody, and natural language content. These features were utilized as inputs to classify PTSD and MDD cross-sectionally. RESULTS:Both video- and audio-based markers contributed to good discriminatory classification accuracy. The algorithm discriminates PTSD status at 1 month after ED admission with an AUC of 0.90 (weighted average precision = 0.83, recall = 0.84, and f1-score = 0.83) as well as depression status at 1 month after ED admission with an AUC of 0.86 (weighted average precision = 0.83, recall = 0.82, and f1-score = 0.82). CONCLUSIONS:Direct clinical observation during post-trauma free speech using deep learning identifies digital markers that can be utilized to classify MDD and PTSD status.
PMID: 32744201
ISSN: 1469-8978
CID: 4615002
Forecasting PTSD Course From Acute Post-Trauma Biomedical Data: A Machine Learning Multicenter Cohort Study [Meeting Abstract]
van Zuiden, Mirjam; Sijbrandij, Marit; Galatzer-Levy, Isaac; Mouthaan, Joanne; Olff, Miranda; Schultebraucks, Katharina
ISI:000535308200244
ISSN: 0006-3223
CID: 4560762
Sex Differences in Peri-Traumatic Cortisol and Inflammatory Cytokines Explain Differential Risk for Future PTSD [Meeting Abstract]
Lalonde, Chloe; Beurel, Eleonore; Gould, Felicia; Dhabhar, Firdaus S.; Schultebraucks, Katharina; Galatzer-Levy, Isaac; Rothbaum, Barbara; Ressler, Kerry J.; Nemeroff, Charles; Michopoulos, Vasiliki; Stevens, Jennifer
ISI:000535308201326
ISSN: 0006-3223
CID: 4560972
A Generalized Predictive Algorithm of Posttraumatic Stress Development Following Emergency Department Admission Using Biological Markers Routinely Collected from Electronic Medical Records [Meeting Abstract]
Schultebraucks, Katharina; Shalev, Arieh; Michopoulos, Vasiliki; Stevens, Jennifer; Jovanovic, Tanja; Bonanno, George; Rothbaum, Barbara; Nemeroff, Charles; Ressler, Kerry; Galatzer-Levy, Isaac
ISI:000535308200243
ISSN: 0006-3223
CID: 4560752
Computational causal discovery for post-traumatic stress in police officers
Saxe, Glenn N; Ma, Sisi; Morales, Leah J; Galatzer-Levy, Isaac R; Aliferis, Constantin; Marmar, Charles R
This article reports on a study aimed to elucidate the complex etiology of post-traumatic stress (PTS) in a longitudinal cohort of police officers, by applying rigorous computational causal discovery (CCD) methods with observational data. An existing observational data set was used, which comprised a sample of 207 police officers who were recruited upon entry to police academy training. Participants were evaluated on a comprehensive set of clinical, self-report, genetic, neuroendocrine and physiological measures at baseline during academy training and then were re-evaluated at 12 months after training was completed. A data-processing pipeline-the Protocol for Computational Causal Discovery in Psychiatry (PCCDP)-was applied to this data set to determine a causal model for PTS severity. A causal model of 146 variables and 345 bivariate relations was discovered. This model revealed 5 direct causes and 83 causal pathways (of four steps or less) to PTS at 12 months of police service. Direct causes included single-nucleotide polymorphisms (SNPs) for the Histidine Decarboxylase (HDC) and Mineralocorticoid Receptor (MR) genes, acoustic startle in the context of low perceived threat during training, peritraumatic distress to incident exposure during first year of service, and general symptom severity during training at 1 year of service. The application of CCD methods can determine variables and pathways related to the complex etiology of PTS in a cohort of police officers. This knowledge may inform new approaches to treatment and prevention of critical incident related PTS.
PMID: 32778671
ISSN: 2158-3188
CID: 4556122
A validated predictive algorithm of post-traumatic stress course following emergency department admission after a traumatic stressor
Schultebraucks, Katharina; Shalev, Arieh Y; Michopoulos, Vasiliki; Grudzen, Corita R; Shin, Soo-Min; Stevens, Jennifer S; Maples-Keller, Jessica L; Jovanovic, Tanja; Bonanno, George A; Rothbaum, Barbara O; Marmar, Charles R; Nemeroff, Charles B; Ressler, Kerry J; Galatzer-Levy, Isaac R
Annually, approximately 30 million patients are discharged from the emergency department (ED) after a traumatic event1. These patients are at substantial psychiatric risk, with approximately 10-20% developing one or more disorders, including anxiety, depression or post-traumatic stress disorder (PTSD)2-4. At present, no accurate method exists to predict the development of PTSD symptoms upon ED admission after trauma5. Accurate risk identification at the point of treatment by ED services is necessary to inform the targeted deployment of existing treatment6-9 to mitigate subsequent psychopathology in high-risk populations10,11. This work reports the development and validation of an algorithm for prediction of post-traumatic stress course over 12 months using two independently collected prospective cohorts of trauma survivors from two level 1 emergency trauma centers, which uses routinely collectible data from electronic medical records, along with brief clinical assessments of the patient's immediate stress reaction. Results demonstrate externally validated accuracy to discriminate PTSD risk with high precision. While the predictive algorithm yields useful reproducible results on two independent prospective cohorts of ED patients, future research should extend the generalizability to the broad, clinically heterogeneous ED population under conditions of routine medical care.
PMID: 32632194
ISSN: 1546-170x
CID: 4518092