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Genetic Basis for Clinical Response to CTLA-4 Blockade in Melanoma
Snyder, Alexandra; Makarov, Vladimir; Merghoub, Taha; Yuan, Jianda; Zaretsky, Jesse M; Desrichard, Alexis; Walsh, Logan A; Postow, Michael A; Wong, Phillip; Ho, Teresa S; Hollmann, Travis J; Bruggeman, Cameron; Kannan, Kasthuri; Li, Yanyun; Elipenahli, Ceyhan; Liu, Cailian; Harbison, Christopher T; Wang, Lisu; Ribas, Antoni; Wolchok, Jedd D; Chan, Timothy A
Background Immune checkpoint inhibitors are effective cancer treatments, but molecular determinants of clinical benefit are unknown. Ipilimumab and tremelimumab are antibodies against cytotoxic T-lymphocyte antigen 4 (CTLA-4). Anti-CTLA-4 treatment prolongs overall survival in patients with melanoma. CTLA-4 blockade activates T cells and enables them to destroy tumor cells. Methods We obtained tumor tissue from patients with melanoma who were treated with ipilimumab or tremelimumab. Whole-exome sequencing was performed on tumors and matched blood samples. Somatic mutations and candidate neoantigens generated from these mutations were characterized. Neoantigen peptides were tested for the ability to activate lymphocytes from ipilimumab-treated patients. Results Malignant melanoma exomes from 64 patients treated with CTLA-4 blockade were characterized with the use of massively parallel sequencing. A discovery set consisted of 11 patients who derived a long-term clinical benefit and 14 patients who derived a minimal benefit or no benefit. Mutational load was associated with the degree of clinical benefit (P=0.01) but alone was not sufficient to predict benefit. Using genomewide somatic neoepitope analysis and patient-specific HLA typing, we identified candidate tumor neoantigens for each patient. We elucidated a neoantigen landscape that is specifically present in tumors with a strong response to CTLA-4 blockade. We validated this signature in a second set of 39 patients with melanoma who were treated with anti-CTLA-4 antibodies. Predicted neoantigens activated T cells from the patients treated with ipilimumab. Conclusions These findings define a genetic basis for benefit from CTLA-4 blockade in melanoma and provide a rationale for examining exomes of patients for whom anti-CTLA-4 agents are being considered. (Funded by the Frederick Adler Fund and others.).
PMCID:4315319
PMID: 25409260
ISSN: 0028-4793
CID: 1355992
The neoantigen landscape underlying clinical response to ipilimumab. [Meeting Abstract]
Charen, Alexandra Snyder; Makarov, Vladimir; Merghoub, Taha; Walsh, Logan; Yuan, Jianda; Miller, Martin; Kannan, Kasthurl; Postow, Michael Andrew; Ellpenahll, Ceyhan; Liu, Cailian; Wolchok, Jedd D.; Chan, Timothy Anthony
ISI:000358613202895
ISSN: 0732-183x
CID: 4187312
A virtual consult service to optimize clinical trial participation in patients with metastatic breast cancer. [Meeting Abstract]
Cadoo, Karen Anne; Shah, Payal Deepak; Charen, Alexandra Snyder; Bromberg, Jacqueline; Comen, Elizabeth Anne; D\Andrea, Gabriella; Dang, Chau T.; Gilewski, Teresa; Gucalp, Ayca; Lake, Diana; Seidman, Andrew David; Theodoulou, Maria; Traina, Tiffany A.; Hudis, Clifford A.; Norton, Larry; Moynahan, Mary Ellen; Modi, Shanu; Dicker, Maura N.; Baselga, Jose; Chandarlapaty, Sarat
ISI:000358613203786
ISSN: 0732-183x
CID: 4187302
Perspectives on immunotherapy in prostate cancer and solid tumors: where is the future?
Snyder, Alexandra; Tepper, Jaron E; Slovin, Susan F
The goals of any cancer therapy are to improve disease control, palliate pain and improve overall survival. We are fortunate to have in our cancer armamentarium two new immune-directed therapies which not only impact on disease control but also on overall survival. The first, sipuleucel-T, a cellular-based vaccine, was approved for prostate cancer and was shown to be safe with minimal toxicity. The second, ipilimumab, a monoclonal antibody directed to an immunologic checkpoint molecule, showed a survival benefit in patients with advanced melanoma. Benefit appeared to correlate in some cases with the development of autoimmune events, signaling that the immune system is in overdrive against the cancer. Where we are and where we will likely go are the topics to be discussed in this review.
PMID: 23806499
ISSN: 1532-8708
CID: 4187262
RET FUSION-POSITIVE ADVANCED LUNG CANCERS: RESPONSE TO FIRST-LINE CHEMOTHERAPY AND SURVIVAL IN COMPARISON TO ROS1 AND ALK FUSION-POSITIVE AND EGFR- AND KRAS-MUTANT LUNG CANCERS [Meeting Abstract]
Drilon, Alexander; Wang, Lu; Joubert, Philippe; Snyder, Alexandra; Cho, Eun Jung; Riely, Gregory; Kris, Mark; Ladanyi, Marc; Rizvi, Naiyer
ISI:000339624904181
ISSN: 1556-0864
CID: 4187282
Neoadjuvant Therapy in Clinical Stage II Pancreatic Adenocarcinoma
Snyder, Alexandra; Allen, Peter; Shamseddine, Ali; Haydar, Ali; Eloubeidi, Mohamed; Faraj, Walid; Khalife, Mohamed; Temraz, Sally; El-Olayan, Ashwaq; Kelsen, David P; El-Merhi, Fadi; Naghy, Mohamed; Saltz, Leonard B; Abou-Alfa, Ghassan K; O'Reilly, Eileen M
PMCID:3481149
PMID: 23112885
ISSN: 1934-7987
CID: 4187272
Intravascular epithelioid hemangioendothelioma of the inferior vena cava: case report of an unusual and unpredictable vascular tumor [Case Report]
Scordi-Bello, Irini A; Snyder, Alexandra; Schwartz, Myron; Fallon, John T
Vascular neoplasms are uncommon and pose a diagnostic and treatment challenge to the pathologist and surgeon, respectively. Epithelioid hemangioendothelioma is a rare neoplasm of vascular origin with an unknown etiology. Its biologic behavior lies somewhere between that of a benign hemangioma and that of a malignant angiosarcoma; however, it is unpredictable at best. Intravascular epithelioid hemangioendotheliomas have been described more often in veins than arteries, and there are only about 30 reports in the English literature. We report here the case of an epithelioid hemangioendothelioma of the inferior vena cava, which presented with abdominal pain, ascites and pedal edema.
PMID: 18417368
ISSN: 1054-8807
CID: 826532