Faculty Bibliography

R2R3 MYB transcription factors play key functions in the regulation of secondary metabolites. In the present study, a R2R3 MYB transcriptional factor NtMYB2 was identified from Chinese narcissus (Narcissus tazetta L. var. Chinensis Roem) and functionally characterized. NtMYB2 belongs to subgroup 4 of the R2R3 MYB transcription factor family that are related to repressor MYBs involved in the regulation of anthocyanin and flavonoids. Transient expression confirmed that NtMYB2 strongly reduced the red pigmentation induced by MYB- anthocyanin activators in agro-infiltrated tobacco leaves. Ectopic expression of NtMYB2 in tobacco significantly reduced the pigmentation and altered the floral phenotypes in transgenic tobacco flowers. Gene expression analysis suggested that NtMYB2 repressed the transcript levels of structural genes involved in anthocyanin biosynthesis pathway, especially the UFGT gene. NtMYB2 gene is expressed in all examined narcissus tissues; the levels of transcription in petals and corona is higher than other tissues and the transcription level at the bud stage was highest. These results show that NtMYB2 is involved in the regulation of anthocyanin biosynthesis pathway and may act as a repressor by down regulating the transcripts of key enzyme genes in Chinese narcissus.

We describe the cases of 2 infants with congenital babesiosis born to mothers with prepartum Lyme disease and subclinical Babesia microti infection. The infants both developed anemia, neutropenia, and thrombocytopenia, and 1 infant required red blood cell transfusion. Both infants recovered with treatment. Additional studies are warranted to define the optimal management strategy for pregnant women with early Lyme disease in geographic areas in which B microti infection is endemic.

Complete genome sequences of four toxigenic Clostridium difficile isolates from patients in the lower Hudson Valley, New York, USA, were achieved. These isolates represent four common sequence types (ST1, ST2, ST8, and ST42) belonging to two distinct phylogenetic clades. All isolates have a 4.0- to 4.2-Mb circular chromosome, and one carries a phage.

We recently identified a novel vancomycin-resistant Enterococcus faecium (VREfm) clone ST736 with reduced daptomycin susceptibility. The objectives of this study were to assess the population dynamics of local VREfm strains and genetic alterations predisposing to daptomycin resistance in VREfm ST736 strains. Multilocus sequence typing and single nucleotide variant data were derived from whole-genome sequencing of 250 E. faecium isolates from 1994-1995 (n = 43), 2009-2012 (n = 115) and 2013 (n = 92). A remarkable change was noticed in the clonality and antimicrobial resistance profiles of E. faecium strains between 1994-1995 and 2013. VREfm sequence type 17 (ST17), the prototype strain of clade A1, was the dominant clone (76.7%) recognized in 1994-1995. By contrast, clone ST736 accounted for 46.7% of VREfm isolates, followed by ST18 (26.1%) and ST412 (20.7%) in 2013. Bayesian evolutionary analysis suggested that clone ST736 emerged between 1996 and 2009. Co-mutations (liaR.W73C and liaS.T120A) of the liaFSR system were identified in all ST736 isolates (n = 111, 100%) examined. Thirty-eight (34.2%) ST736 isolates exhibited daptomycin-resistant phenotype, of which 13 isolates had mutations in both the liaFSR and cardiolipin synthase (cls) genes and showed high level of resistance with a daptomycin MIC50 of 32 μg/mL. The emergence of ST736 strains with mutations predisposing to daptomycin resistance and subsequent clonal spread among inpatients contributed to the observed high occurrence of daptomycin resistance in VREfm at our institution. The expanding geographic distribution of ST736 strains in other states and countries raises concerns about its global dissemination.

The stability and natural convection heat transfer characteristics of TiO₂-water nanofluid in enclosures with different rotation angles (α = -45°, α = 0°, α = 45°, and α = 90°) are experimentally investigated. The effects of different pH values and doses (m) of dispersant agent on the stability of TiO₂-water nanofluid are investigated. It is found that TiO₂-water nanofluid with m = 6 wt% and pH = 8 has the lowest transmittance and has the best stability. The effects of different rotation angles (α = -45°, α = 0°, α = 45°, and α = 90°), nanoparticle mass fractions (wt% = 0.1%, wt% = 0.3%, and wt% = 0.5%) and heating powers (Q = 1 W, Q = 5 W, Q = 10 W, Q = 15 W, and Q = 20 W) on the natural convection heat transfer characteristics are also studied. It is found that the enclosure with rotation angle α = 0° has the highest Nusselt number, followed by the enclosure with rotation angles α = 45° and α = 90°, the enclosure with rotation angle α = -45° has the lowest Nusselt number. It is also found that natural convection heat transfer performance increases with the nanoparticle mass fraction and heating power, but the enhancement ratio decreases with the heating power.

The natural convection heat transfer of horizontal rectangle enclosures with different aspect ratios (A = 2:1 and A = 4:1) filled with Ag-Ga nanofluid (different nanoparticle volume fractions φ = 0.01, φ = 0.03, φ = 0.05 and radiuses r = 20 nm, r = 40 nm, r = 80 nm) at different Rayleigh numbers (Ra = 1 × 10³ and Ra = 1 × 10⁵) is investigated by a two-phase lattice Boltzmann model. It is found that the Nusselt number enhancement ratios of two enclosures (A = 2:1 and A = 4:1) filled with Ag-Ga nanofluid (r = 20 nm) are the same compared with those of the water at the corresponding aspect ratio enclosure. The more flat horizontal rectangular enclosure (A = 4:1) has the higher Nusselt number than the less flat horizontal rectangular enclosure (A = 2:1). It is also found that Nusselt number increases with the decreasing nanoparticle radius. Nusselt number enhancement ratios for every nanoparticle radius reducing by half at high Rayleigh number are higher than those at low Rayleigh number in most cases. The interaction forces between particles are also investigated in this paper. It is found that the Brownian force F _B is about two magnitudes greater than that of drag force F _D, and the value of driving force F _S in A = 4:1 enclosure is about twice the value of driving force F _S in A = 2:1 enclosure while other forces are almost the same.

We report here the incidental detection and complete genome sequence of a urinary Escherichia coli strain harboring mcr-1 and resistant to colistin in a New York patient returning from Portugal in 2016. This strain, with sequence type 1485 (ST1485), was a non-extended-spectrum beta-lactamase (ESBL) and non-carbapenemase producer and carried the mcr-1 gene on an IncHI2 plasmid.