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Population average T2 MRI maps reveal quantitative regional transformations in the degenerating rabbit intervertebral disc that vary by lumbar level
Martin, John T; Collins, Christopher M; Ikuta, Kensuke; Mauck, Robert L; Elliott, Dawn M; Zhang, Yeija; Anderson, D Greg; Vaccaro, Alexander R; Albert, Todd J; Arlet, Vincent; Smith, Harvey E
Magnetic resonance imaging (MRI) with T2-weighting is routinely performed to assess intervertebral disc degeneration. Standard clinical evaluations of MR images are qualitative, however, and do not focus on region-specific alterations in the disc. Utilizing a rabbit needle puncture model, T2 mapping was performed on injured discs to develop a quantitative description of the degenerative process following puncture. To do so, an 18G needle was inserted into four discs per rabbit (L3/L4 to L6/L7) and T2 maps were generated pre- and 4 weeks post-injury. Individual T2 maps were normalized to a disc-specific coordinate system and then averaged for pre- and post-injury population composite T2 maps. We also developed a method to automatically segment the nucleus pulposus by fitting the NP region of the T2 maps with modified 2-D and 3-D Gaussian distribution functions. Puncture injury produced alterations in MR signal intensity in a region-specific manner mirroring human degeneration. Population average T2 maps provided a quantitative representation of the injury response, and identified deviations of individual degenerate discs from the pre-injury population. We found that the response to standardized injury was modest at lower lumbar levels, likely as a result of increased disc dimensions. These tools will be valuable for the quantitative characterization of disc degeneration in future clinical and pre-clinical studies. (c) 2014 Orthopaedic Research Society. Published by Wiley Periodicals, Inc. J Orthop Res 33:140-148, 2015.
PMCID:4426209
PMID: 25273831
ISSN: 0736-0266
CID: 1395692
Bloch-based MRI system simulator considering realistic electromagnetic fields for calculation of signal, noise, and specific absorption rate
Cao, Zhipeng; Oh, Sukhoon; Sica, Christopher T; McGarrity, John M; Horan, Timothy; Luo, Wei; Collins, Christopher M
PURPOSE: To describe and introduce new software capable of accurately simulating MR signal, noise, and specific absorption rate (SAR) given arbitrary sample, sequence, static magnetic field distribution, and radiofrequency magnetic and electric field distributions for each transmit and receive coil. THEORY AND METHODS: Using fundamental equations for nuclear precession and relaxation, signal reception, noise reception, and calculation of SAR, a versatile MR simulator was developed. The resulting simulator was tested with simulation of a variety of sequences demonstrating several common imaging contrast types and artifacts. The simulation of intravoxel dephasing and rephasing with both tracking of the first order derivatives of each magnetization vector and multiple magnetization vectors was examined to ensure adequate representation of the MR signal. A quantitative comparison of simulated and experimentally measured SNR was also performed. RESULTS: The simulator showed good agreement with our expectations, theory, and experiment. CONCLUSION: With careful design, an MR simulator producing realistic signal, noise, and SAR for arbitrary sample, sequence, and fields has been created. It is hoped that this tool will be valuable in a wide variety of applications. Magn Reson Med 72:237-247, 2014. (c) 2013 Wiley Periodicals, Inc.
PMID: 24006153
ISSN: 0740-3194
CID: 1061962
Measurement of SAR-induced temperature increase in a phantom and in vivo with comparison to numerical simulation
Oh, Sukhoon; Ryu, Yeun-Chul; Carluccio, Giuseppe; Sica, Christopher T; Collins, Christopher M
PURPOSE: To compare numerically simulated and experimentally measured temperature increase due to specific energy absorption rate from radiofrequency fields. METHODS: Temperature increase induced in both a phantom and in the human forearm when driving an adjacent circular surface coil was mapped using the proton resonance frequency shift technique of magnetic resonance thermography. The phantom and forearm were also modeled from magnetic resonance image data, and both specific energy absorption rate and temperature change as induced by the same coil were simulated numerically. RESULTS: The simulated and measured temperature increase distributions were generally in good agreement for the phantom. The relative distributions for the human forearm were very similar, with the simulations giving maximum temperature increase about 25% higher than measured. CONCLUSION: Although a number of parameters and uncertainties are involved, it should be possible to use numerical simulations to produce reasonably accurate and conservative estimates of temperature distribution to ensure safety in magnetic resonance imaging. Magn Reson Med 71:1923-1931, 2014. (c) 2013 Wiley Periodicals, Inc.
PMCID:3842374
PMID: 23804188
ISSN: 0740-3194
CID: 917562
A fast, analytically based method to optimize local transmit efficiency for a transmit array
Carluccio, Giuseppe; Collins, Christopher M; Erricolo, Danilo
PURPOSE: To develop an analytically based algorithm for rapid optimization of the local radiofrequency magnetic (B1+) field intensity for a given radiofrequency power through a transmit array. The analytical nature of the method will yield insight to optimization requirements and provides a valuable reference for numerically based searches. METHODS: With the knowledge of the B1+ field distribution generated by each single coil of the array, both the phases and the amplitudes of each coil current are optimized to maximize the magnitude of the B1+ field in a specific location of the body per unit of power transmitted through the array and, consequently, minimizing the whole body specific absorption rate for a given pulse sequence. RESULTS: Simulations considering the human body show that the proposed method can reduce the whole-body specific absorption rate for a given B1+ magnitude at the location of interest by a factor of about 6.3 compared to the classic birdcage current configuration, and by a factor of 3.2 compared to phase-only shimming in a case with significant coupling between the elements of the array. CONCLUSION: The proposed method can rapidly provide valuable information pertinent to the optimization of field distributions from transmit arrays. Magn Reson Med 71:432-439, 2014. (c) 2013 Wiley Periodicals, Inc.
PMCID:4149182
PMID: 23412950
ISSN: 0740-3194
CID: 746502
Radiofrequency field enhancement with high dielectric constant (HDC) pads in a receive array coil at 3.0T
Yang, Qing X; Rupprecht, Sebastian; Luo, Wei; Sica, Christopher; Herse, Zachary; Wang, Jianli; Cao, Zhipeng; Vesek, Jeffrey; Lanagan, Michael T; Carluccio, Giuseppe; Ryu, Yeun-Chul; Collins, Christopher M
PURPOSE: To investigate the use of a new high-dielectric constant (HDC) material for improving SNR and transmission efficiency for clinical MRI applications at 3 Tesla (T) with cervical spine imaging. MATERIALS AND METHODS: Human subjects were imaged using a commercial cervical spine receive array coil on a clinical system with and without pads containing Barium Titanate beads in deuterium water placed around the neck. Numerical electromagnetic field simulations of the same configuration were also performed. RESULTS: Experimental and simulated maps of transmit and receive fields showed greater efficiency for imaging the cervical spine when the pads were present. Experimental measurements showed a significant improvement in SNR with the pads present and an average input power reduction of 46%. CONCLUSION: Use of HDC material can enhance SNR and transmission efficiency for clinical imaging of the cervical spine at 3.0T. J. Magn. Reson. Imaging 2013;38:435-440. (c) 2012 Wiley Periodicals, Inc.
PMCID:3621009
PMID: 23293090
ISSN: 1053-1807
CID: 516242
Analysis of Conservative and Magnetically Induced Electric Fields in a Low-Frequency Birdcage Coil
Park, Bu S; Rajan, Sunder S; Collins, Christopher M; Angelone, Leonardo M
Numerical methods are used to evaluate variations of the electromagnetic fields generated by a head-sized birdcage coil as a function of load ("loading effect"). The loading effect was analyzed for the cases of a coil loaded with a conductive cylindrical sample, a dielectric cylindrical sample, and an anatomically precise head model. Maxwell equations were solved by means of finite difference time domain (FDTD) method conducted at 12.8, 64, and 128 MHz. Simulation results indicate that at 12.8 MHz the conservative electric field (Ec) caused by the scalar electric potentials between the coil and the load or within the load was significantly higher than the magnetically-induced electric field (Ei) and was the major component of the total electric field (Etotal). The amplitudes of Ec and Etotal are seen to be lower within a sample than at a corresponding location in an empty coil, but approximately 65% higher in the space between coil and sample than at a corresponding location in an empty coil. This is due to polarization effects generating an additional scalar potential parallel to the original field. The increased electric field between coil and sample may cause increased power deposition at the surface of the sample and may affect the RF-induced currents in external leads used for physiological recording, i.e. ECG, during MRI scanning
ORIGINAL:0011187
ISSN: 1942-0730
CID: 2152162
Permittivity and performance of dielectric pads with sintered ceramic beads in MRI: early experiments and simulations at 3 T
Luo, Wei; Lanagan, Michael T; Sica, Christopher T; Ryu, Yeunchul; Oh, Sukhoon; Ketterman, Matthew; Yang, Qing X; Collins, Christopher M
Passive dielectric materials have been used to improve aspects of MRI by affecting the distribution of radiofrequency electromagnetic fields. Recently, interest in such materials has increased with the number of high-field MRI sites. Here, we introduce a new material composed of sintered high-permittivity ceramic beads in deuterated water. This arrangement maintains the ability to create flexible pads for conforming to individual subjects. The properties of the material are measured and the performance of the material is compared to previously used materials in both simulation and experiment at 3 T. Results show that both permittivity of the beads and effect on signal-to-noise ratio and required transmit power in MRI are greater than those of materials consisting of ceramic powder in water. Importantly, use of beads results in both higher permittivity and lower conductivity than use of powder. Magn Reson Med, 2012. (c) 2012 Wiley Periodicals, Inc.
PMCID:4122217
PMID: 22890908
ISSN: 0740-3194
CID: 174362
An approach to rapid calculation of temperature change in tissue using spatial filters to approximate effects of thermal conduction
Carluccio, Giuseppe; Erricolo, Danilo; Oh, Sukhoon; Collins, Christopher M
We present an approach to performing rapid calculations of temperature within tissue by interleaving, at regular time intervals, 1) an analytical solution to the Pennes (or other desired) bioheat equation excluding the term for thermal conduction and 2) application of a spatial filter to approximate the effects of thermal conduction. Here, the basic approach is presented with attention to filter design. The method is applied to a few different cases relevant to magnetic resonance imaging, and results are compared to those from a full finite-difference (FD) implementation of the Pennes bioheat equation. It is seen that results of the proposed method are in reasonable agreement with those of the FD approach, with about 15% difference in the calculated maximum temperature increase, but are calculated in a fraction of the time, requiring less than 2% of the calculation time for the FD approach in the cases evaluated.
PMCID:4040531
PMID: 23358947
ISSN: 0018-9294
CID: 421342
Slice-Selective Transmit Array Pulses for Improvement in Excitation Uniformity and Reduction of SAR
Park, BuSik; Sung, Kyunghyun; McGarrity, John; Oh, Suk-hoon; Cao, Zhipeng; Wang, Zhangwei; Collins, Christopher M
To overcome challenges of inhomogeneous transmit B1 distribution and high specific energy absorption rate (SAR) in MRI, we compare slice-selective array-optimized composite pulse and RF shimming designed to both improve B1 uniformity and reduce SAR using an 8-channel transmit head array loaded with a head model at various RF pulse excitation times, and compare results with standard quadrature voltage distribution at 3T (128 MHz) and 7T (300 MHz). The excitation uniformity was estimated throughout the 3D brain region and SAR was calculated for the whole head. The optimized composite pulse could produce significantly better homogeneity and significantly better homogeneity when SAR was not constrained, and both significantly better homogeneity and lower SAR when the pulse duration was allowed to be twice that of the quadrature or RF shimmed pulse. When the total pulse durations were constrained to the same length, the relative advantages of the optimized composite pulse for producing better homogeneity and lower SAR simultaneously were diminished. Using the optimization results, the slice-selective composite pulse sequence was implemented on a 3D MRI simulator currently under development, and showed both effective slice selection and improvement in excitation uniformity compared to a conventional quadrature driving method
ORIGINAL:0011186
ISSN: 1942-0730
CID: 2152152
On consideration of radiated power in RF field simulations for MRI
Liu, Wanzhan; Kao, Chien-ping; Collins, Christopher M; Smith, Michael B; Yang, Qing X
In numerical analyses of radiofrequency (RF) fields for MRI, RF power is often permitted to radiate out of the problem region. In reality, RF power will be confined by the magnet bore and RF screen enclosing the magnet room. We present numerical calculations at different frequencies for various surface and volume coils, with samples from simple spheres to the human body in environments from free space to a shielded RF room. Results for calculations within a limited problem region show radiated power increases with frequency. When the magnet room RF screen is included, nearly all the power is dissipated in the human subject. For limited problem regions, inclusion of a term for radiation loss results in an underestimation of transmit efficiency compared to results including the complete bore and RF screen. If the term for radiated power is not included, calculated coil efficiencies are slightly overestimated compared to the complete case.
PMCID:3393780
PMID: 22473620
ISSN: 1522-2594
CID: 2151912