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Inference for natural mediation effects under case-cohort sampling with applications in identifying COVID-19 vaccine correlates of protection [PrePrint]

Benkeser, David; Diaz, Ivan; Ran, Jialu
ORIGINAL:0015880
ISSN: 2331-8422
CID: 5305122

When the ends don't justify the means: Learning a treatment strategy to prevent harmful indirect effects [PrePrint]

Rudloph, Kara E; Diaz, Ivan
ORIGINAL:0015881
ISSN: 2331-8422
CID: 5305132

Nonparametric efficient causal mediation with intermediate confounders

Diaz, I; Hejazi, N. S.; Rudolph, K. E.; van der Laan, M. J.
ISI:000733423700010
ISSN: 0006-3444
CID: 5304822

Nonparametric Causal Effects Based on Longitudinal Modified Treatment Policies

Diaz, Ivan; Williams, Nicholas; Hoffman, Katherine L.; Schenck, Edward J.
ISI:000693374400001
ISSN: 0162-1459
CID: 5304422

Efficiently transporting causal (in)direct effects to new populations under intermediate confounding and with multiple mediators [PrePrint]

Rudolph, Kara E; Diaz, Ivan
ORIGINAL:0015883
ISSN: 2331-8422
CID: 5305152

Polypharmacy in Older Adults Hospitalized for Heart Failure

Unlu, Ozan; Levitan, Emily B; Reshetnyak, Evgeniya; Kneifati-Hayek, Jerard; Diaz, Ivan; Archambault, Alexi; Chen, Ligong; Hanlon, Joseph T; Maurer, Mathew S; Safford, Monika M; Lachs, Mark S; Goyal, Parag
BACKGROUND:Despite potential harm that can result from polypharmacy, real-world data on polypharmacy in the setting of heart failure (HF) are limited. We sought to address this knowledge gap by studying older adults hospitalized for HF derived from the REGARDS study (Reasons for Geographic and Racial Differences in Stroke). METHODS:We examined 558 older adults aged ≥65 years with adjudicated HF hospitalizations from 380 hospitals across the United States. We collected and examined data from the REGARDS baseline assessment, medical charts from HF-adjudicated hospitalizations, the American Hospital Association annual survey database, and Medicare's Hospital Compare website. We counted the number of medications taken at hospital admission and discharge; and classified each medication as HF-related, non-HF cardiovascular-related, or noncardiovascular-related. RESULTS:The vast majority of participants (84% at admission and 95% at discharge) took ≥5 medications; and 42% at admission and 55% at discharge took ≥10 medications. The prevalence of taking ≥10 medications (polypharmacy) increased over the study period. As the number of total medications increased, the number of noncardiovascular medications increased more rapidly than the number of HF-related or non-HF cardiovascular medications. CONCLUSIONS:Defining polypharmacy as taking ≥10 medications might be more ideal in the HF population as most patients already take ≥5 medications. Polypharmacy is common both at admission and hospital discharge, and its prevalence is rising over time. The majority of medications taken by older adults with HF are noncardiovascular medications. There is a need to develop strategies that can mitigate the negative effects of polypharmacy among older adults with HF.
PMID: 33045844
ISSN: 1941-3297
CID: 4931762

Machine Learning Prediction of Stroke Mechanism in Embolic Strokes of Undetermined Source

Kamel, Hooman; Navi, Babak B; Parikh, Neal S; Merkler, Alexander E; Okin, Peter M; Devereux, Richard B; Weinsaft, Jonathan W; Kim, Jiwon; Cheung, Jim W; Kim, Luke K; Casadei, Barbara; Iadecola, Costantino; Sabuncu, Mert R; Gupta, Ajay; Díaz, Iván
BACKGROUND AND PURPOSE:One-fifth of ischemic strokes are embolic strokes of undetermined source (ESUS). Their theoretical causes can be classified as cardioembolic versus noncardioembolic. This distinction has important implications, but the categories' proportions are unknown. METHODS:Using data from the Cornell Acute Stroke Academic Registry, we trained a machine-learning algorithm to distinguish cardioembolic versus non-cardioembolic strokes, then applied the algorithm to ESUS cases to determine the predicted proportion with an occult cardioembolic source. A panel of neurologists adjudicated stroke etiologies using standard criteria. We trained a machine learning classifier using data on demographics, comorbidities, vitals, laboratory results, and echocardiograms. An ensemble predictive method including L1 regularization, gradient-boosted decision tree ensemble (XGBoost), random forests, and multivariate adaptive splines was used. Random search and cross-validation were used to tune hyperparameters. Model performance was assessed using cross-validation among cases of known etiology. We applied the final algorithm to an independent set of ESUS cases to determine the predicted mechanism (cardioembolic or not). To assess our classifier's validity, we correlated the predicted probability of a cardioembolic source with the eventual post-ESUS diagnosis of atrial fibrillation. RESULTS:[95% CI, 0.58-0.78]). ESUS patients with high predicted probability of cardiac embolism were older and had more coronary and peripheral vascular disease, lower ejection fractions, larger left atria, lower blood pressures, and higher creatinine levels. CONCLUSIONS:A machine learning estimator that distinguished known cardioembolic versus noncardioembolic strokes indirectly estimated that 44% of ESUS cases were cardioembolic.
PMCID:8034802
PMID: 32781943
ISSN: 1524-4628
CID: 5304602

Sex-driven modifiers of Alzheimer risk: A multimodality brain imaging study

Rahman, Aneela; Schelbaum, Eva; Hoffman, Katherine; Diaz, Ivan; Hristov, Hollie; Andrews, Randolph; Jett, Steven; Jackson, Hande; Lee, Andrea; Sarva, Harini; Pahlajani, Silky; Matthews, Dawn; Dyke, Jonathan; de Leon, Mony J; Isaacson, Richard S; Brinton, Roberta D; Mosconi, Lisa
OBJECTIVE:F-fluorodeoxyglucose [FDG] PET and structural MRI). METHODS:status, family history), medical (e.g., depression, diabetes mellitus, hyperlipidemia), hormonal (e.g., thyroid disease, menopause), and lifestyle AD risk factors (e.g., smoking, diet, exercise, intellectual activity) were assessed. Statistical parametric mapping and least absolute shrinkage and selection operator regressions were used to compare AD biomarkers between men and women and to identify the risk factors associated with sex-related differences. RESULTS:< 0.05, family-wise error corrected for multiple comparisons). The male group did not show biomarker abnormalities compared to the female group. Results were independent of age and remained significant with the use of age-matched groups. Second to female sex, menopausal status was the predictor most consistently and strongly associated with the observed brain biomarker differences, followed by hormone therapy, hysterectomy status, and thyroid disease. CONCLUSION/CONCLUSIONS:Hormonal risk factors, in particular menopause, predict AD endophenotype in middle-aged women. These findings suggest that the window of opportunity for AD preventive interventions in women is early in the endocrine aging process.
PMID: 32580974
ISSN: 1526-632x
CID: 4493352

Risk of Ischemic Stroke in Patients With Coronavirus Disease 2019 (COVID-19) vs Patients With Influenza

Merkler, Alexander E; Parikh, Neal S; Mir, Saad; Gupta, Ajay; Kamel, Hooman; Lin, Eaton; Lantos, Joshua; Schenck, Edward J; Goyal, Parag; Bruce, Samuel S; Kahan, Joshua; Lansdale, Kelsey N; LeMoss, Natalie M; Murthy, Santosh B; Stieg, Philip E; Fink, Matthew E; Iadecola, Costantino; Segal, Alan Z; Cusick, Marika; Campion, Thomas R; Diaz, Ivan; Zhang, Cenai; Navi, Babak B
IMPORTANCE/OBJECTIVE:It is uncertain whether coronavirus disease 2019 (COVID-19) is associated with a higher risk of ischemic stroke than would be expected from a viral respiratory infection. OBJECTIVE:To compare the rate of ischemic stroke between patients with COVID-19 and patients with influenza, a respiratory viral illness previously associated with stroke. DESIGN, SETTING, AND PARTICIPANTS/METHODS:This retrospective cohort study was conducted at 2 academic hospitals in New York City, New York, and included adult patients with emergency department visits or hospitalizations with COVID-19 from March 4, 2020, through May 2, 2020. The comparison cohort included adults with emergency department visits or hospitalizations with influenza A/B from January 1, 2016, through May 31, 2018 (spanning moderate and severe influenza seasons). EXPOSURES/METHODS:COVID-19 infection confirmed by evidence of severe acute respiratory syndrome coronavirus 2 in the nasopharynx by polymerase chain reaction and laboratory-confirmed influenza A/B. MAIN OUTCOMES AND MEASURES/METHODS:A panel of neurologists adjudicated the primary outcome of acute ischemic stroke and its clinical characteristics, mechanisms, and outcomes. We used logistic regression to compare the proportion of patients with COVID-19 with ischemic stroke vs the proportion among patients with influenza. RESULTS:Among 1916 patients with emergency department visits or hospitalizations with COVID-19, 31 (1.6%; 95% CI, 1.1%-2.3%) had an acute ischemic stroke. The median age of patients with stroke was 69 years (interquartile range, 66-78 years); 18 (58%) were men. Stroke was the reason for hospital presentation in 8 cases (26%). In comparison, 3 of 1486 patients with influenza (0.2%; 95% CI, 0.0%-0.6%) had an acute ischemic stroke. After adjustment for age, sex, and race, the likelihood of stroke was higher with COVID-19 infection than with influenza infection (odds ratio, 7.6; 95% CI, 2.3-25.2). The association persisted across sensitivity analyses adjusting for vascular risk factors, viral symptomatology, and intensive care unit admission. CONCLUSIONS AND RELEVANCE/CONCLUSIONS:In this retrospective cohort study from 2 New York City academic hospitals, approximately 1.6% of adults with COVID-19 who visited the emergency department or were hospitalized experienced ischemic stroke, a higher rate of stroke compared with a cohort of patients with influenza. Additional studies are needed to confirm these findings and to investigate possible thrombotic mechanisms associated with COVID-19.
PMID: 32614385
ISSN: 2168-6157
CID: 5304212

Improving Precision and Power in Randomized Trials for COVID-19 Treatments Using Covariate Adjustment, for Binary, Ordinal, and Time-to-Event Outcomes

Benkeser, David; Díaz, Iván; Luedtke, Alex; Segal, Jodi; Scharfstein, Daniel; Rosenblum, Michael
Time is of the essence in evaluating potential drugs and biologics for the treatment and prevention of COVID-19. There are currently over 400 clinical trials (phase 2 and 3) of treatments for COVID-19 registered on clinicaltrials.gov. Covariate adjustment is a statistical analysis method with potential to improve precision and reduce the required sample size for a substantial number of these trials. Though covariate adjustment is recommended by the U.S. Food and Drug Administration and the European Medicines Agency, it is underutilized, especially for the types of outcomes (binary, ordinal and time-to-event) that are common in COVID-19 trials. To demonstrate the potential value added by covariate adjustment in this context, we simulated two-arm, randomized trials comparing a hypothetical COVID-19 treatment versus standard of care, where the primary outcome is binary, ordinal, or time-to-event. Our simulated distributions are derived from two sources: longitudinal data on over 500 patients hospitalized at Weill Cornell Medicine New York Presbyterian Hospital, and a Centers for Disease Control and Prevention (CDC) preliminary description of 2449 cases. We found substantial precision gains from using covariate adjustment--equivalent to 9-21% reductions in the required sample size to achieve a desired power--for a variety of estimands (targets of inference) when the trial sample size was at least 200. We provide an R package and practical recommendations for implementing covariate adjustment. The estimators that we consider are robust to model misspecification.
PMID: 32577668
CID: 5840742