Try a new search

Format these results:

Searched for:

in-biosketch:yes

person:akhmea01

Total Results:

227


Genome-wide association study of survival in patients with pancreatic adenocarcinoma

Wu, Chen; Kraft, Peter; Stolzenberg-Solomon, Rachael; Steplowski, Emily; Brotzman, Michelle; Xu, Mousheng; Mudgal, Poorva; Amundadottir, Laufey; Arslan, Alan A; Bueno-de-Mesquita, H Bas; Gross, Myron; Helzlsouer, Kathy; Jacobs, Eric J; Kooperberg, Charles; Petersen, Gloria M; Zheng, Wei; Albanes, Demetrius; Boutron-Ruault, Marie-Christine; Buring, Julie E; Canzian, Federico; Cao, Guangwen; Duell, Eric J; Elena, Joanne W; Gaziano, J Michael; Giovannucci, Edward L; Hallmans, Goran; Hutchinson, Amy; Hunter, David J; Jenab, Mazda; Jiang, Guoliang; Khaw, Kay-Tee; Lacroix, Andrea; Li, Zhaoshen; Mendelsohn, Julie B; Panico, Salvatore; Patel, Alpa V; Qian, Zhi Rong; Riboli, Elio; Sesso, Howard; Shen, Hongbing; Shu, Xiao-Ou; Tjonneland, Anne; Tobias, Geoffrey S; Trichopoulos, Dimitrios; Virtamo, Jarmo; Visvanathan, Kala; Wactawski-Wende, Jean; Wang, Chengfeng; Yu, Kai; Zeleniuch-Jacquotte, Anne; Chanock, Stephen; Hoover, Robert; Hartge, Patricia; Fuchs, Charles S; Lin, Dongxin; Wolpin, Brian M
BACKGROUND AND OBJECTIVE: Survival of patients with pancreatic adenocarcinoma is limited and few prognostic factors are known. We conducted a two-stage genome-wide association study (GWAS) to identify germline variants associated with survival in patients with pancreatic adenocarcinoma. METHODS: We analysed overall survival in relation to single nucleotide polymorphisms (SNPs) among 1005 patients from two large GWAS datasets, PanScan I and ChinaPC. Cox proportional hazards regression was used in an additive genetic model with adjustment for age, sex, clinical stage and the top four principal components of population stratification. The first stage included 642 cases of European ancestry (PanScan), from which the top SNPs (p
PMCID:3816124
PMID: 23180869
ISSN: 0017-5749
CID: 222822

Circulating prolactin levels and risk of epithelial ovarian cancer

Clendenen, Tess V; Arslan, Alan A; Lokshin, Anna E; Liu, Mengling; Lundin, Eva; Koenig, Karen L; Berrino, Franco; Hallmans, Goran; Idahl, Annika; Krogh, Vittorio; Lukanova, Annekatrin; Marrangoni, Adele; Muti, Paola; Nolen, Brian M; Ohlson, Nina; Shore, Roy E; Sieri, Sabina; Zeleniuch-Jacquotte, Anne
PURPOSE: Indirect evidence from experimental and epidemiological studies suggests that prolactin may be involved in ovarian cancer development. However, the relationship between circulating prolactin levels and risk of ovarian cancer is unknown. METHODS: We conducted a nested case-control study of 230 cases and 432 individually matched controls within three prospective cohorts to evaluate whether pre-diagnostic circulating prolactin is associated with subsequent risk of ovarian cancer. We also assessed whether lifestyle and reproductive factors are associated with circulating prolactin among controls. RESULTS: Prolactin levels were significantly lower among post- versus pre-menopausal women, parous versus nulliparous women, and past versus never users of oral contraceptives in our cross-sectional analysis of controls. In our nested case-control study, we observed a non-significant positive association between circulating prolactin and ovarian cancer risk (OR(Q4vsQ1) 1.56, 95 % CI 0.94, 2.63, p trend 0.15). Our findings were similar in multivariate-adjusted models and in the subgroup of women who donated blood >/=5 years prior to diagnosis. We observed a significant positive association between prolactin and risk for the subgroup of women with BMI >/=25 kg/m(2) (OR(Q4vsQ1) 3.10, 95 % CI 1.39, 6.90), but not for women with BMI <25 kg/m(2) (OR(Q4vsQ1) 0.81, 95 % CI 0.40, 1.64). CONCLUSIONS: Our findings suggest that prolactin may be associated with increased risk of ovarian cancer, particularly in overweight/obese women. Factors associated with reduced risk of ovarian cancer, such as parity and use of oral contraceptives, were associated with lower prolactin levels, which suggests that modulation of prolactin may be a mechanism underlying their association with risk.
PMCID:3602319
PMID: 23378139
ISSN: 0957-5243
CID: 222782

Polymorphisms in genes related to one-carbon metabolism are not related to pancreatic cancer in PanScan and PanC4

Leenders, Max; Bhattacharjee, Samsiddhi; Vineis, Paolo; Stevens, Victoria; Bueno-de-Mesquita, H Bas; Shu, Xiao-Ou; Amundadottir, Laufey; Gross, Myron; Tobias, Geoffrey S; Wactawski-Wende, Jean; Arslan, Alan A; Duell, Eric J; Fuchs, Charles S; Gallinger, Steven; Hartge, Patricia; Hoover, Robert N; Holly, Elizabeth A; Jacobs, Eric J; Klein, Alison P; Kooperberg, Charles; Lacroix, Andrea; Li, Donghui; Mandelson, Margaret T; Olson, Sara H; Petersen, Gloria; Risch, Harvey A; Yu, Kai; Wolpin, Brian M; Zheng, Wei; Agalliu, Ilir; Albanes, Demetrius; Boutron-Ruault, Marie-Christine; Bracci, Paige M; Buring, Julie E; Canzian, Federico; Chang, Kenneth; Chanock, Stephen J; Cotterchio, Michelle; Gaziano, J Michael; Giovanucci, Edward L; Goggins, Michael; Hallmans, Goran; Hankinson, Susan E; Hoffman-Bolton, Judith A; Hunter, David J; Hutchinson, Amy; Jacobs, Kevin B; Jenab, Mazda; Khaw, Kay-Tee; Kraft, Peter; Krogh, Vittorio; Kurtz, Robert C; McWilliams, Robert R; Mendelsohn, Julie B; Patel, Alpa V; Rabe, Kari G; Riboli, Elio; Tjonneland, Anne; Trichopoulos, Dimitrios; Virtamo, Jarmo; Visvanathan, Kala; Elena, Joanne W; Yu, Herbert; Zeleniuch-Jacquotte, Anne; Stolzenberg-Solomon, Rachael Z
PURPOSE: The evidence of a relation between folate intake and one-carbon metabolism (OCM) with pancreatic cancer (PanCa) is inconsistent. In this study, the association between genes and single-nucleotide polymorphisms (SNPs) related to OCM and PanCa was assessed. METHODS: Using biochemical knowledge of the OCM pathway, we identified thirty-seven genes and 834 SNPs to examine in association with PanCa. Our study included 1,408 cases and 1,463 controls nested within twelve cohorts (PanScan). The ten SNPs and five genes with lowest p values (<0.02) were followed up in 2,323 cases and 2,340 controls from eight case-control studies (PanC4) that participated in PanScan2. The correlation of SNPs with metabolite levels was assessed for 649 controls from the European Prospective Investigation into Cancer and Nutrition. RESULTS: When both stages were combined, we observed suggestive associations with PanCa for rs10887710 (MAT1A) (OR 1.13, 95 %CI 1.04-1.23), rs1552462 (SYT9) (OR 1.27, 95 %CI 1.02-1.59), and rs7074891 (CUBN) (OR 1.91, 95 %CI 1.12-3.26). After correcting for multiple comparisons, no significant associations were observed in either the first or second stage. The three suggested SNPs showed no correlations with one-carbon biomarkers. CONCLUSIONS: This is the largest genetic study to date to examine the relation between germline variations in OCM-related genes polymorphisms and the risk of PanCa. Suggestive evidence for an association between polymorphisms and PanCa was observed among the cohort-nested studies, but this did not replicate in the case-control studies. Our results do not strongly support the hypothesis that genes related to OCM play a role in pancreatic carcinogenesis.
PMCID:4127987
PMID: 23334854
ISSN: 0957-5243
CID: 222802

Circulating levels of 25-hydroxyvitamin D and risk of breast cancer: a nested case-control study

Scarmo, Stephanie; Afanasyeva, Yelena; Lenner, Per; Koenig, Karen L; Horst, Ronald L; Clendenen, Tess V; Arslan, Alan A; Chen, Yu; Hallmans, Goran; Lundin, Eva; Rinaldi, Sabina; Toniolo, Paolo; Shore, Roy E; Zeleniuch-Jacquotte, Anne
INTRODUCTION: Experimental evidence suggests a protective role for circulating 25-hydroxyvitamin D (25(OH)D) in breast cancer development, but the results of epidemiological studies have been inconsistent. METHODS: We conducted a case-control study nested within two prospective cohorts, the New York University Women's Health Study and the Northern Sweden Mammary Screening Cohort. Blood samples were collected at enrollment, and women were followed up for breast cancer ascertainment. In total, 1,585 incident breast cancer cases were individually-matched to 2,940 controls. Of these subjects, 678 cases and 1,208 controls contributed two repeat blood samples, at least one year apart. Circulating levels of 25(OH)D were measured, and multivariate odds ratios (ORs) and 95% confidence intervals (CIs) were calculated using conditional logistic regression. RESULTS: No association was observed between circulating levels of 25(OH)D and overall breast cancer risk (multivariate-adjusted model OR = 0.94, 95% CI = 0.76-1.16 for the highest vs. lowest quintile, ptrend = 0.30). The temporal reliability of 25(OH)D measured in repeat blood samples was high (intraclass correlation coefficients for season-adjusted 25(OH)D > 0.70). An inverse association between 25(OH)D levels and breast cancer risk was observed among women who were
PMCID:3672761
PMID: 23442740
ISSN: 1465-5411
CID: 316582

Diabetes and risk of pancreatic cancer: a pooled analysis from the pancreatic cancer cohort consortium

Elena, Joanne W; Steplowski, Emily; Yu, Kai; Hartge, Patricia; Tobias, Geoffrey S; Brotzman, Michelle J; Chanock, Stephen J; Stolzenberg-Solomon, Rachael Z; Arslan, Alan A; Bueno-de-Mesquita, H Bas; Helzlsouer, Kathy; Jacobs, Eric J; LaCroix, Andrea; Petersen, Gloria; Zheng, Wei; Albanes, Demetrius; Allen, Naomi E; Amundadottir, Laufey; Bao, Ying; Boeing, Heiner; Boutron-Ruault, Marie-Christine; Buring, Julie E; Gaziano, J Michael; Giovannucci, Edward L; Duell, Eric J; Hallmans, Goran; Howard, Barbara V; Hunter, David J; Hutchinson, Amy; Jacobs, Kevin B; Kooperberg, Charles; Kraft, Peter; Mendelsohn, Julie B; Michaud, Dominique S; Palli, Domenico; Phillips, Lawrence S; Overvad, Kim; Patel, Alpa V; Sansbury, Leah; Shu, Xiao-Ou; Simon, Michael S; Slimani, Nadia; Trichopoulos, Dimitrios; Visvanathan, Kala; Virtamo, Jarmo; Wolpin, Brian M; Zeleniuch-Jacquotte, Anne; Fuchs, Charles S; Hoover, Robert N; Gross, Myron
PURPOSE: Diabetes is a suspected risk factor for pancreatic cancer, but questions remain about whether it is a risk factor or a result of the disease. This study prospectively examined the association between diabetes and the risk of pancreatic adenocarcinoma in pooled data from the NCI pancreatic cancer cohort consortium (PanScan). METHODS: The pooled data included 1,621 pancreatic adenocarcinoma cases and 1,719 matched controls from twelve cohorts using a nested case-control study design. Subjects who were diagnosed with diabetes near the time (<2 years) of pancreatic cancer diagnosis were excluded from all analyses. All analyses were adjusted for age, race, gender, study, alcohol use, smoking, BMI, and family history of pancreatic cancer. RESULTS: Self-reported diabetes was associated with a forty percent increased risk of pancreatic cancer (OR = 1.40, 95 % CI: 1.07, 1.84). The association differed by duration of diabetes; risk was highest for those with a duration of 2-8 years (OR = 1.79, 95 % CI: 1.25, 2.55); there was no association for those with 9+ years of diabetes (OR = 1.02, 95 % CI: 0.68, 1.52). CONCLUSIONS: These findings provide support for a relationship between diabetes and pancreatic cancer risk. The absence of association in those with the longest duration of diabetes may reflect hypoinsulinemia and warrants further investigation.
PMCID:3529822
PMID: 23112111
ISSN: 0957-5243
CID: 216052

Genetic variants in hormone-related genes and risk of breast cancer

Clendenen, Tess; Zeleniuch-Jacquotte, Anne; Wirgin, Isaac; Koenig, Karen L; Afanasyeva, Yelena; Lundin, Eva; Arslan, Alan A; Axelsson, Tomas; Forsti, Asta; Hallmans, Goran; Hemminki, Kari; Lenner, Per; Roy, Nirmal; Shore, Roy E; Chen, Yu
Sex hormones play a key role in the development of breast cancer. Certain polymorphic variants (SNPs and repeat polymorphisms) in hormone-related genes are associated with sex hormone levels. However, the relationship observed between these genetic variants and breast cancer risk has been inconsistent. We conducted a case-control study nested within two prospective cohorts to assess the relationship between specific genetic variants in hormone-related genes and breast cancer risk. In total, 1164 cases and 2111 individually-matched controls were included in the study. We did not observe an association between potential functional genetic polymorphisms in the estrogen pathway, SHBG rs6259, ESR1 rs2234693, CYP19 rs10046 and rs4775936, and UGT1A1 rs8175347, or the progesterone pathway, PGR rs1042838, with the risk of breast cancer. Our results suggest that these genetic variants do not have a strong effect on breast cancer risk.
PMCID:3720532
PMID: 23935996
ISSN: 1932-6203
CID: 495042

An absolute risk model to identify individuals at elevated risk for pancreatic cancer in the general population

Klein, Alison P; Lindstrom, Sara; Mendelsohn, Julie B; Steplowski, Emily; Arslan, Alan A; Bueno-de-Mesquita, H Bas; Fuchs, Charles S; Gallinger, Steven; Gross, Myron; Helzlsouer, Kathy; Holly, Elizabeth A; Jacobs, Eric J; Lacroix, Andrea; Li, Donghui; Mandelson, Margaret T; Olson, Sara H; Petersen, Gloria M; Risch, Harvey A; Stolzenberg-Solomon, Rachael Z; Zheng, Wei; Amundadottir, Laufey; Albanes, Demetrius; Allen, Naomi E; Bamlet, William R; Boutron-Ruault, Marie-Christine; Buring, Julie E; Bracci, Paige M; Canzian, Federico; Clipp, Sandra; Cotterchio, Michelle; Duell, Eric J; Elena, Joanne; Gaziano, J Michael; Giovannucci, Edward L; Goggins, Michael; Hallmans, Goran; Hassan, Manal; Hutchinson, Amy; Hunter, David J; Kooperberg, Charles; Kurtz, Robert C; Liu, Simin; Overvad, Kim; Palli, Domenico; Patel, Alpa V; Rabe, Kari G; Shu, Xiao-Ou; Slimani, Nadia; Tobias, Geoffrey S; Trichopoulos, Dimitrios; Van Den Eeden, Stephen K; Vineis, Paolo; Virtamo, Jarmo; Wactawski-Wende, Jean; Wolpin, Brian M; Yu, Herbert; Yu, Kai; Zeleniuch-Jacquotte, Anne; Chanock, Stephen J; Hoover, Robert N; Hartge, Patricia; Kraft, Peter
PURPOSE: We developed an absolute risk model to identify individuals in the general population at elevated risk of pancreatic cancer. PATIENTS AND METHODS: Using data on 3,349 cases and 3,654 controls from the PanScan Consortium, we developed a relative risk model for men and women of European ancestry based on non-genetic and genetic risk factors for pancreatic cancer. We estimated absolute risks based on these relative risks and population incidence rates. RESULTS: Our risk model included current smoking (multivariable adjusted odds ratio (OR) and 95% confidence interval: 2.20 [1.84-2.62]), heavy alcohol use (>3 drinks/day) (OR: 1.45 [1.19-1.76]), obesity (body mass index >30 kg/m(2)) (OR: 1.26 [1.09-1.45]), diabetes >3 years (nested case-control OR: 1.57 [1.13-2.18], case-control OR: 1.80 [1.40-2.32]), family history of pancreatic cancer (OR: 1.60 [1.20-2.12]), non-O ABO genotype (AO vs. OO genotype) (OR: 1.23 [1.10-1.37]) to (BB vs. OO genotype) (OR 1.58 [0.97-2.59]), rs3790844(chr1q32.1) (OR: 1.29 [1.19-1.40]), rs401681(5p15.33) (OR: 1.18 [1.10-1.26]) and rs9543325(13q22.1) (OR: 1.27 [1.18-1.36]). The areas under the ROC curve for risk models including only non-genetic factors, only genetic factors, and both non-genetic and genetic factors were 58%, 57% and 61%, respectively. We estimate that fewer than 3/1,000 U.S. non-Hispanic whites have more than a 5% predicted lifetime absolute risk. CONCLUSION: Although absolute risk modeling using established risk factors may help to identify a group of individuals at higher than average risk of pancreatic cancer, the immediate clinical utility of our model is limited. However, a risk model can increase awareness of the various risk factors for pancreatic cancer, including modifiable behaviors.
PMCID:3772857
PMID: 24058443
ISSN: 1932-6203
CID: 829972

From phenomenology to mechanism: Resistance to annexin a5 anticoagulant activity identifies a subset of patients with antiphospholipid antibodies and thrombosis [Meeting Abstract]

Wolgast, L R; Wu, X X; Arslan, A; Rand, J H
EMBASE:70960960
ISSN: 0006-4971
CID: 217142

Defining the genomic signature of the parous breast

Peri, Suraj; de Cicco, Ricardo Lopez; Santucci-Pereira, Julia; Slifker, Michael; Ross, Eric A; Russo, Irma H; Russo, Patricia A; Arslan, Alan A; Belitskaya-Levy, Ilana; Zeleniuch-Jacquotte, Anne; Bordas, Pal; Lenner, Per; Ahman, Janet; Afanasyeva, Yelena; Johansson, Robert; Sheriff, Fathima; Hallmans, Goran; Toniolo, Paolo; Russo, Jose
BACKGROUND: It is accepted that a woman's lifetime risk of developing breast cancer after menopause is reduced by early full term pregnancy and multiparity. This phenomenon is thought to be associated with the development and differentiation of the breast during pregnancy. METHODS: In order to understand the underlying molecular mechanisms of pregnancy induced breast cancer protection, we profiled and compared the transcriptomes of normal breast tissue biopsies from 71 parous (P) and 42 nulliparous (NP) healthy postmenopausal women using Affymetrix Human Genome U133 Plus 2.0 arrays. To validate the results, we performed real time PCR and immunohistochemistry. RESULTS: We identified 305 differentially expressed probesets (208 distinct genes). Of these, 267 probesets were up- and 38 down-regulated in parous breast samples; bioinformatics analysis using gene ontology enrichment revealed that up-regulated genes in the parous breast represented biological processes involving differentiation and development, anchoring of epithelial cells to the basement membrane, hemidesmosome and cell-substrate junction assembly, mRNA and RNA metabolic processes and RNA splicing machinery. The down-regulated genes represented biological processes that comprised cell proliferation, regulation of IGF-like growth factor receptor signaling, somatic stem cell maintenance, muscle cell differentiation and apoptosis. CONCLUSIONS: This study suggests that the differentiation of the breast imprints a genomic signature that is centered in the mRNA processing reactome. These findings indicate that pregnancy may induce a safeguard mechanism at post-transcriptional level that maintains the fidelity of the transcriptional process.
PMCID:3487939
PMID: 23057841
ISSN: 1755-8794
CID: 222832

Selected polymorphisms in sex hormone-related genes, circulating sex hormones and risk of endometrial cancer

Lundin, Eva; Wirgin, Isaac; Lukanova, Annekatrin; Afanasyeva, Yelena; Krogh, Vittorio; Axelsson, Tomas; Hemminki, Kari; Clendenen, Tess V; Arslan, Alan A; Ohlson, Nina; Sieri, Sabina; Roy, Nirmal; Koenig, Karen L; Idahl, Annika; Berrino, Franco; Toniolo, Paolo; Hallmans, Goran; Forsti, Asta; Muti, Paola; Lenner, Per; Shore, Roy E; Zeleniuch-Jacquotte, Anne
Background: The role of estrogen and progesterone in the development of endometrial cancer is well documented. Few studies have examined the association of genetic variants in sex hormone-related genes with endometrial cancer risk. Methods: We conducted a case-control study nested within three cohorts to examine the association of endometrial cancer risk with polymorphisms in hormone-related genes among 391 cases (92% postmenopausal at diagnosis) and 712 individually-matched controls. We also examined the association of these polymorphisms with circulating levels of sex hormones and SHBG in a cross-sectional analysis including 596 healthy postmenopausal women at blood donation (controls from this nested case-control study and from a nested case-control study of breast cancer in one of the three cohorts). Results: Adjusting for endometrial cancer risk factors, the A allele of rs4775936 in CYP19 was significantly associated (OR(per allele)=1.22, 95% CI=1.01-1.47, p(trend)=0.04), while the T allele of rs10046 was marginally associated with increased risk of endometrial cancer (OR(per allele)=1.20, 95% CI=0.99-1.45, p(trend)=0.06). PGR rs1042838 was also marginally associated with risk (OR(per allele)=1.25, 95% CI=0.96-1.61, p(trend)=0.09). No significant association was found for the other polymorphisms, i.e. CYP1B1 rs1800440 and rs1056836, UGT1A1 rs8175347, SHBG rs6259 and ESR1 rs2234693. Rs8175347 was significantly associated with postmenopausal levels of estradiol, free estradiol and estrone and rs6259 with SHBG and estradiol. Conclusion: Our findings support an association between genetic variants in CYP19, and possibly PGR, and risk of endometrial cancer.
PMCID:3663487
PMID: 22633539
ISSN: 1877-7821
CID: 178879