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Differential Arterial Supply of the ACL and PCL Revealed by 7T-qMRI, Histology, and Micro-CT
Mueller, Maximilian M; Conner-Rilk, Sebastian; Klinger, Craig E; Wang, Jerry; von Rehlingen-Prinz, Fidelius; Hingsamer, Valentin; Shea, Kevin G; DiFelice, Gregory S; Brown, Ryan; Rodeo, Scott A; Green, Daniel W
BACKGROUND/UNASSIGNED:Qualitative anatomical studies have reported ligament-specific differences in vascular organization in the anterior and posterior cruciate ligaments (ACL and PCL). PURPOSE/UNASSIGNED:(1) To quantitatively map the regional arterial vascular supply of the ACL and PCL across standardized anatomical regions using 7-Tesla quantitative magnetic resonance imaging (7T-qMRI), histology, and high-resolution computed tomography (micro-CT) in a fresh-frozen human cadaveric model; and (2) to directly compare vascular distribution patterns between cruciate ligaments. STUDY DESIGN/UNASSIGNED:Descriptive laboratory study. METHODS/UNASSIGNED:Seven fresh-frozen human cadaveric knee specimens (mean ± SD age, 41.9 ± 15.5 years) underwent pre- and postcontrast 7T-qMRI to quantify ligamentous vascularity by measuring contrast enhancement. Ligament zones were categorized based on relative distance from distal insertion as follows: 1 (≥90%), 2 (>75% to 90%), 3 (>25% to 75%), 4 (>10% to 25%), and 5 (≤10%). Subsequent quantitative algorithm-based histologic analysis with hematoxylin and eosin staining followed, and an additional specimen underwent micro-CT (98 μm) for qualitative assessment. RESULTS/UNASSIGNED:= .87). A 3-zone 7T-qMRI and histologic sensitivity analysis confirmed the distribution pattern. CONCLUSION/UNASSIGNED:This study demonstrates a distinct, region-specific arterial distribution in the ACL and PCL. The ACL exhibited predominantly proximal vascular supply, whereas the PCL showed greater distal and overall arterial contribution. These quantitative differences in vascular organization provide a biological basis that may help explain ligament-specific healing behavior. CLINICAL RELEVANCE/UNASSIGNED:This study establishes 7T-qMRI as a methodology for quantitative comparison of vascularity between the ACL and PCL to support future translational studies investigating the relationship between vascular supply, ligament-specific healing patterns, and injury-specific treatment strategies.
PMCID:13525254
PMID: 42668771
ISSN: 2325-9671
CID: 6071914
An Open-Source Software Toolbox for Rapid Radiofrequency Coil Design and Evaluation in MRI
Giannakopoulos, Ilias I; Zhang, Bei; Cruz Serrallés, José E; Brown, Ryan; Lattanzi, Riccardo
PURPOSE/OBJECTIVE:Image quality and resolution in MRI are fundamentally constrained by the performance of radiofrequency (RF) coils used to excite the spins and receive the signal. Electromagnetic (EM) simulations are essential for optimizing coil performance. Existing tools are often slow, memory-intensive, and require expensive licenses. To address these limitations, we introduce a novel, comprehensive, open-source EM simulation tool for RF coil design in MRI. THEORY AND METHODS/METHODS:Our toolbox consists of four complementary software components: (1) a full-wave 3D EM solver based on the wire-surface-volume integral equation (WSVIE), where tensor decompositions reduce memory usage and accelerate simulations for fine body model resolutions; (2) a reduced-order model technique enabling patient-specific coil simulations in minutes; (3) a fully automatic circuit co-simulator for coil tuning, matching, decoupling, preamplifier decoupling, and detuning; and (4) a numerical EM basis generator that can be used to compute ultimate performance metrics. We demonstrated the toolbox with a series of simulations for different applications at 7 T MRI. RESULTS:Our proposed reduced-order model WSVIE solver was 70 times faster compared to a commercial solver for the simulation of a 31-channel 7 T head coil. Our co-simulator tuned, matched, and decoupled the array in 30 min, compared to a few days time of manual interactions needed with the commercial package. The average difference between the signal-to-noise ratio maps was less than 15%. CONCLUSION/CONCLUSIONS:The proposed open-source simulation framework enables fast, memory-friendly, accurate, and anatomy-specific RF coil array design, making it a powerful tool for RF coil engineering.
PMID: 41612164
ISSN: 1522-2594
CID: 6003712
An Open-Source Software Toolbox for Rapid Radiofrequency Coil Design and Evaluation in MRI
Giannakopoulos, Ilias I; Zhang, Bei; Cruz Serrallés, José E; Brown, Ryan; Lattanzi, Riccardo
PURPOSE:Image quality and resolution in MRI are fundamentally constrained by the performance of radiofrequency (RF) coils used to excite the spins and receive the signal. Electromagnetic (EM) simulations are essential for optimizing coil performance. Existing tools are often slow, memory-intensive, and require expensive licenses. To address these limitations, we introduce a novel, comprehensive, open-source EM simulation tool for RF coil design in MRI. THEORY AND METHODS:Our toolbox consists of four complementary software components: (1) a full-wave 3D EM solver based on the wire-surface-volume integral equation (WSVIE), where tensor decompositions reduce memory usage and accelerate simulations for fine body model resolutions; (2) a reduced-order model technique enabling patient-specific coil simulations in minutes; (3) a fully automatic circuit co-simulator for coil tuning, matching, decoupling, preamplifier decoupling, and detuning; and (4) a numerical EM basis generator that can be used to compute ultimate performance metrics. We demonstrated the toolbox with a series of simulations for different applications at 7 T MRI. RESULTS:Our proposed reduced-order model WSVIE solver was 70 times faster compared to a commercial solver for the simulation of a 31-channel 7 T head coil. Our co-simulator tuned, matched, and decoupled the array in 30 min, compared to a few days time of manual interactions needed with the commercial package. The average difference between the signal-to-noise ratio maps was less than 15%. CONCLUSION:The proposed open-source simulation framework enables fast, memory-friendly, accurate, and anatomy-specific RF coil array design, making it a powerful tool for RF coil engineering.
PMCID:13162148
PMID: 41612164
ISSN: 1522-2594
CID: 6072135
Four-row MRI receive array with remote circuitry for improved parallel imaging in radiation therapy systems
Lakshmanan, Karthik; Phillips, Lindsay; Wang, Bili; Montin, Eros; Walczyk, Jerzy; Brown, Ryan
Objective 
Previous MR guided radiation therapy (MRgRT) radiofrequency coil arrays have been limited to one to two rows of coils in the head-foot direction because of the desire to place radiation-opaque coil circuitry outside the window through which the radiation beam travels. However, such layouts limit parallel imaging undersampling in the head-foot direction. We recently demonstrated a three-row array with a remote coil circuit that improved parallel imaging performance, while preserving the signal-to-noise ratio (SNR) and the radiolucent window. Here we evaluate a four-row prototype design to determine if further parallel imaging advantages could be realized.

Approach
We built remote circuits that allowed radio-opaque components to be placed outside the field of view through which the radiation beam is expected to travel. The circuit consisted of a phase shifter to cancel the phase introduced by the radiolucent coaxial link between the circuit and coil, followed by standard components for tuning, matching, detuning, and preamplifier decoupling. Measurements were performed on an abdominal phantom to compare single-channel coils with remote or local circuits, followed by tests on a 16-channel four-row array.

Main results
The four-row array maintained SNR comparable to two-and three-row designs while supporting 3× head-foot acceleration (minimum reciprocal g-factor = 0.74) and 2×3 multi-directional acceleration (minimum reciprocal g-factor = 0.72), capabilities which were not achievable with previous designs.

Significance
These results demonstrate the technical feasibility of four-row designs, which may benefit MRgRT applications that require high SNR and temporal-resolution.
PMID: 41855663
ISSN: 1361-6560
CID: 6017012
Higher arterial supply in the distal quadriceps tendon: Results from 7-Tesla quantitative magnetic resonance imaging, histology and high-resolution computed tomography
Mueller, Maximilian M; Klinger, Craig E; Conner-Rilk, Sebastian; Wang, Jerry; Shea, Kevin G; DiFelice, Gregory S; Brown, Ryan; Bilal, Maneeza; Potter, Hollis G; Helfet, David L; Rodeo, Scott A; Green, Daniel W
PURPOSE/OBJECTIVE:This study aimed to quantitatively assess relative arterial contributions to the quadriceps tendon (QT) using 7-Tesla quantitative magnetic resonance imaging (7T-qMRI), histology and high-resolution computed tomography (micro-CT) in a fresh-frozen human cadaveric model. METHODS:Six human cadaveric knee pairs were obtained (mean age: 43 years; range: 23-61 years). Pre- and post-contrast 7T-qMRI scans were performed to quantify tendonous vascularity. Subsequent algorithm-based quantitative histologic analysis was performed using hematoxylin and eosin staining, with validation by CD31 immunohistochemistry. Qualitative analysis was performed on two additional knee specimens using 98 μm micro-CT imaging. RESULTS:The distal QT demonstrated higher median arterial contributions versus central and proximal regions (distal, 47.4% [interquartile range: 30.8%-64.1%]; central, 28.6% [20.4%-41.5%]; proximal, 11.6% [8.7%-18.4%]), with significantly greater contributions distally versus proximally (Cohen's d = 1.58; p = 0.021). These findings aligned with the sagittal sub-analysis (deep-proximal 17.2 ± 19.3% vs. deep-distal 43.4 ± 20.3%; Cohen's d = 1.32; p = 0.050). Histologic analysis (interobserver-reliability: r = 0.95) corroborated the MRI results (distal QT, 43.5 ± 7.9%; central, 30.7 ± 6.4%; proximal, 25.8 ± 4.1%), with significant differences between distal and both proximal (Cohen's d = 2.81; p < 0.001) and central (Cohen's d = 1.78; p = 0.012) regions. The deep layer was found to have significantly higher arterial contributions (61.6 ± 14.2%) versus the superficial layer (38.4 ± 14.2%) (Cohen's d = 1.64; p = 0.018). The medial and lateral QT demonstrated lower arterial contributions versus middle QT (Cohen's d = 0.96-1.26; p > 0.050). CONCLUSION/CONCLUSIONS:7T-qMRI and algorithm-based histological analysis of arterial QT contributions revealed significantly greater arterial contributions in the distal compared to the proximal as well as in the deep compared to the superficial region. While the central region demonstrated higher arterial contributions than the medial and lateral aspects, these differences were not statistically significant. Given that the majority of injuries affect the distal and central portions of the QT, these findings reinforce the rationale for direct tendon-to-bone repair; however, clinical studies are necessary to confirm these findings. LEVEL OF EVIDENCE/METHODS:Level V, cadaveric study.
PMID: 41451648
ISSN: 1433-7347
CID: 6007952
Free-Breathing Hybrid Technique for Simultaneous Morphological and Quantitative Abdominal Imaging at 0.55 T
B Keerthivasan, Mahesh; Bruno, Mary; Solomon, Eddy; Brown, Ryan; Brantner, Douglas; Block, Kai Tobias; Chandarana, Hersh
OBJECTIVES/OBJECTIVE:Quantitative proton density fat fraction (PDFF) and R2* estimation at lower field strengths, such as 0.55 T, is challenging due to lower signal-to-noise ratio, reduced fat water chemical shift, and increased T2* relaxation times. In this study, we propose a 3D hybrid technique for abdominal imaging at 0.55 T that enables the simultaneous acquisition of T2-weighted and T1-weighted images and quantification of fat fraction and R2* parameters. MATERIALS AND METHODS/METHODS:Numerical simulations were performed to optimize a prototype radial hybrid turbo spin echo gradient echo (TSE-GRE) acquisition scheme for improved PDFF and R2* estimation accuracy. Phantom imaging experiments with and without motion were performed to evaluate the sensitivity of the estimation to external motion. Eleven volunteers were imaged on a prototype 0.55 T system. Data were acquired using the proposed technique under free-breathing conditions, and motion-compensated reconstruction was performed using the respiratory signal from a pilot-tone device. Image contrast and estimation performance were compared with conventional acquisition schemes in vitro and in vivo. RESULTS:Numerical simulations indicated R2* estimation accuracy was more sensitive to the choice of echo time compared with PDFF. Performing motion compensation reduced the mean error in R2* from 24 to 5 s-1 while the mean error in PDFF only reduced from 2.7% to 1.6%. The proposed technique generated T2-weighted images with comparable relative liver-spleen contrast as conventional imaging and there were no significant differences (P>0.05) in the PDFF and R2* values estimated from the hybrid technique compared with conventional multi-echo GRE. Further, the free-breathing acquisition allowed improved slice coverage while overcoming breath-hold limitations of conventional acquisition schemes. CONCLUSIONS:The use of a hybrid TSE-GRE acquisition technique can allow simultaneous morphological and quantitative PDFF and R2* estimation at 0.55 T under free-breathing conditions.
PMID: 40511639
ISSN: 1536-0210
CID: 5869742
Greater medial arterial supply revealed by 7-Tesla quantitative magnetic resonance imaging, histology and high-resolution computed tomography of the patellar tendon
Mueller, Maximilian M; Klinger, Craig E; Conner-Rilk, Sebastian; Wang, Jerry; Shea, Kevin G; DiFelice, Gregory S; Brown, Ryan; Bilal, Maneeza; Sculco, Peter K; Rodeo, Scott A; Green, Daniel W
PURPOSE/UNASSIGNED:To quantitatively assess relative arterial contributions to the patellar tendon (PT) across predefined anatomic regions with 7-Tesla quantitative magnetic resonance imaging (7T-qMRI), algorithm-based histological analysis and high-resolution computed tomography (micro-CT) in a cadaveric model. METHODS/UNASSIGNED:Seven fresh-frozen human cadaveric knee pairs (mean age 41.9 ± 15.5 years) underwent limited vascular dissection and arterial cannulation. Pre- and post-contrast 7T-qMRI, with a volumetric interpolated breath-hold examination (VIBE) three-dimensional T1-weighted gradient echo pulse sequence, quantified tendonous vascularity by measuring contrast enhancement. Subsequent quantitative algorithm-based histologic analysis with hematoxylin and eosin (H&E) staining followed, and two additional specimens underwent high-resolution (98 μm) micro-CT for qualitative vascular assessment. RESULTS/UNASSIGNED: = 0.018). Micro-CT revealed a robust vascular network along the medial PT with smaller branches laterally. Distal to the inferior patellar pole, a peripatellar circular network, extending medially into the posterior PT layers, was qualitatively identified. CONCLUSION/UNASSIGNED:7T-qMRI and histological analyses demonstrated significantly greater arterial supply along the medial border of the PT, while micro-CT revealed a medial and peripatellar circular vascular network extending from the medial margin and the inferior patellar pole into the posterior tendon layers. These findings identify the medial margin as the main vascular source for the PT, with implications for surgical preservation and reducing PT devascularization risk. LEVEL OF EVIDENCE/UNASSIGNED:N/A.
PMCID:12975651
PMID: 41822380
ISSN: 2197-1153
CID: 6014902
Global Maxwell Tomography Using the Volume-Surface Integral Equation for Improved Estimation of Electrical Properties
Giannakopoulos, Ilias I; Serralles, Jose E Cruz; Paska, Jan; Cloos, Martijn A; Brown, Ryan; Lattanzi, Riccardo
OBJECTIVE:Global Maxwell Tomography (GMT) is a noninvasive inverse optimization method for the estimation of electrical properties (EP) from magnetic resonance (MR) measurements. GMT uses the volume integral equation (VIE) in the forward problem and assumes that the sample has negligible effect on the coil currents. Consequently, GMT calculates the coil's incident fields with an initial EP distribution and keeps them constant for all optimization iterations. This can lead to erroneous reconstructions. This work introduces a novel version of GMT that replaces VIE with the volume-surface integral equation (VSIE), which recalculates the coil currents at every iteration based on updated EP estimates before computing the associated fields. METHODS:We simulated an 8-channel transceiver coil array for 7 T brain imaging and reconstructed the EP of a realistic head model using VSIE-based GMT. We built the coil, collected experimental MR measurements, and reconstructed EP of a two-compartment phantom. RESULTS:In simulations, VSIE-based GMT outperformed VIE-based GMT by at least 12% for both EP. In experiments, the relative difference with respect to probe-measured EP values in the inner (outer) compartment was 13% (26%) and 17% (33%) for the permittivity and conductivity, respectively. CONCLUSION:The use of VSIE over VIE enhances GMT's performance by accounting for the effect of the EP on the coil currents. SIGNIFICANCE:VSIE-based GMT does not rely on an initial EP estimate, rendering it more suitable for experimental reconstructions compared to the VIE-based GMT.
PMCID:12642828
PMID: 40418609
ISSN: 1558-2531
CID: 6072133
Multi-modal proton and sodium MRI for outcome prediction in mild traumatic brain injury
Chen, Anna M; Gerhalter, Teresa; Ma, Zhongyang; Gajdošík, Martin; Dehkharghani, Seena; Peralta, Rosemary; Gajdošík, Mia; Sheriff, Sulaiman; Ahn, Sinyeob; Li, Xiaochun; Goldberg, Judith D; Bushnik, Tamara; Zarate, Alejandro; Silver, Jonathan M; Im, Brian S; Wall, Stephen P; Cloos, Martijn A; Baete, Steven; Brown, Ryan; Madelin, Guillaume; Kirov, Ivan I
OBJECTIVES/OBJECTIVE:In mild traumatic brain injury, imaging biomarkers are needed to support clinical management. In four antecedent publications, we used two new (sodium and fingerprinting) and two established (spectroscopy and diffusion) MR techniques in a longitudinally followed patient cohort. Here we report final results and combine all data to determine which marker(s) from the four modalities offer the greatest utility for detecting injury and predicting outcomes. We also leverage the independent specificities offered by each modality to explore injury mechanisms. MATERIALS AND METHODS/METHODS:The longitudinal spectroscopy data were analysed to complete a full data set of proton (spectroscopy, fingerprinting, diffusion) and sodium MRI, acquired alongside symptomatic, cognitive, and functional assessments in 27 patients at 1, 3, and 12 months following injury. Twenty-three matched controls were scanned once. Testing for associations between nine MR markers and three outcome measures was standardized across the entire data set, and performed using Spearman correlations and logistic regression. RESULTS:from fingerprinting (marker of the cellular microenvironment). CONCLUSIONS:We identified independent, dynamic, metabolic and ionic changes, with choline and creatine from spectroscopy fulfilling the most criteria for a clinical biomarker.
PMID: 40794310
ISSN: 1432-1459
CID: 5907082
High-resolution volumetric dynamic magnetic resonance imaging of the wrist using an 8-channel flexible receive coil
Zi, Ruoxun; Abbas, Batool; Wang, Bili; Walczyk, Jerzy; Brown, Ryan; Petchprapa, Catherine; Fishbaugh, James; Gerig, Guido; Block, Kai Tobias; Lattanzi, Riccardo
OBJECTIVE:Real-time imaging is useful for the evaluation of wrist instability. However, currently available real-time magnetic resonance imaging (MRI) methods are limited due to their 2D nature or provide insufficient temporal resolution and image quality for quantitative kinematic analysis. This work introduces a novel approach for volumetric dynamic MRI of the wrist joint during active motion and demonstrates the feasibility of tracking carpal bone motion. MATERIALS AND METHODS/METHODS:A flexible 8-element 3 T wrist receive coil and 3D-printed support platform for guiding motion were designed for dynamic wrist imaging. 2D real-time images were acquired using a fat-saturated FLASH sequence with radial sampling and reconstructed with the GRASP algorithm. Corresponding volumetric dynamic wrist images were obtained by assembling 2D real-time images into 3D snapshots using autodetected MRI-visible markers for slice alignment. The proposed method was demonstrated for radial-ulnar deviation on five healthy volunteers. RESULTS:The flexible wrist coil provided high SNR while allowing a wide range of wrist movements. 2D real-time wrist images were acquired with a temporal resolution of 48 ms/frame with negligible streaking artifacts. Carpal bones and metacarpal bones were properly aligned in the assembled dynamic volumes for all five subjects. The excellent bone-to-tissue contrast enabled accurate segmentation of the individual carpal bones on the assembled dynamic volumes. CONCLUSION/CONCLUSIONS:This work introduces a novel wrist coil and demonstrates that real-time volumetric dynamic examination of the moving wrist is feasible. The achieved image quality and high temporal resolution could enable automatic segmentation of carpal bones and quantitative kinematic assessment for evaluating wrist instability.
PMID: 39560769
ISSN: 1432-2161
CID: 5758362