Searched for: school:SOM
Department/Unit:Neuroscience Institute
Coordination between stochastic and deterministic specification in the Drosophila visual system
Courgeon, Maximilien; Desplan, Claude
Sensory systems use stochastic fate specification to increase their repertoire of neuronal types. How these stochastic decisions are coordinated with the development of their targets is unknown. In the Drosophila retina, two subtypes of UV-sensitive R7-photoreceptors are stochastically specified. In contrast, their targets in the brain are specified through a deterministic program. Here, we identify subtypes of the main target of R7, the Dm8 neurons, each specific to the different subtypes of R7s. Dm8 subtypes are produced in excess by distinct neuronal progenitors, independently from R7. Following matching with their cognate R7, supernumerary Dm8s are eliminated by apoptosis. Two interacting cell adhesion molecules, Dpr11 and DIPγ, are essential for the matching of one of the synaptic pairs. These mechanisms allow the qualitative and quantitative matching of R7/Dm8 and permit the stochastic choice made in R7 to propagate to the brain.
PMID: 31582524
ISSN: 1095-9203
CID: 4118642
Preserving inhibition during developmental hearing loss rescues auditory learning and perception
Mowery, Todd M; Caras, Melissa L; Hassan, Syeda I; Wang, Derek J; Dimidschstein, Jordane; Fishell, Gord; Sanes, Dan H
Transient periods of childhood hearing loss can induce deficits in aural communication that persist long after auditory thresholds have returned to normal, reflecting long-lasting impairments to the auditory central nervous system. Here, we asked whether these behavioral deficits could be reversed by treating one of the central impairments: reduction of inhibitory strength. Male and female gerbils received bilateral earplugs to induce a mild, reversible hearing loss during the critical period of auditory cortex development. After earplug removal and the return of normal auditory thresholds, we trained and tested animals on an amplitude modulation detection task. Transient developmental hearing loss induced both learning and perceptual deficits, which were entirely corrected by treatment with a selective GABA reuptake inhibitor (SGRI). To explore the mechanistic basis for these behavioral findings, we recorded the amplitudes of GABAA and GABAB receptor-mediated inhibitory postsynaptic potentials (IPSPs) in auditory cortical and thalamic brain slices. In hearing loss-reared animals, cortical IPSP amplitudes were significantly reduced within a few days of hearing loss onset, and this reduction persisted into adulthood. SGRI treatment during the critical period prevented the hearing loss-induced reduction of IPSP amplitudes, but when administered after the critical period it only restored GABAB receptor-mediated IPSP amplitudes. These effects were driven, in part, by the ability of SGRI to upregulate α1 subunit-dependent GABAA responses. Similarly, SGRI prevented the hearing loss-induced reduction of GABAA and GABAB IPSPs in the ventral nucleus of the medial geniculate body. Thus, by maintaining, or subsequently rescuing, GABAergic transmission in the central auditory thalamocortical pathway, some perceptual and cognitive deficits induced by developmental hearing loss can be prevented.SIGNIFICANCE STATEMENTEven a temporary period of childhood hearing loss can induce communication deficits that persist long after auditory thresholds return to normal. These deficits may arise from long-lasting central impairments, including the loss of synaptic inhibition. Here, we asked whether hearing loss-induced behavioral deficits could be reversed by reinstating normal inhibitory strength. Gerbils reared with transient hearing loss displayed both learning and perceptual deficits. However, when animals were treated with a selective GABA reuptake inhibitor during or after hearing loss, behavioral deficits were entirely corrected. This behavioral recovery was correlated with the return of normal thalamic and cortical inhibitory function. Thus, some perceptual and cognitive deficits induced by developmental hearing loss were prevented with a treatment that rescues a central synaptic property.
PMID: 31451577
ISSN: 1529-2401
CID: 4054252
Optimization of data acquisition and analysis for fiber ball imaging
Moss, Hunter G; McKinnon, Emilie T; Glenn, G Russell; Helpern, Joseph A; Jensen, Jens H
The inverse Funk transform of high angular resolution diffusion imaging (HARDI) data provides an estimate for the fiber orientation density function (fODF) in white matter (WM). Since the inverse Funk transform is a straightforward linear transformation, this technique, referred to as fiber ball imaging (FBI), offers a practical means of calculating the fODF that avoids the need for a response function or nonlinear numerical fitting. Nevertheless, the accuracy of FBI depends on both the choice of b-value and the number of diffusion-encoding directions used to acquire the HARDI data. To inform the design of optimal scan protocols for its implementation, FBI predictions are investigated here with in vivo data from healthy adult volunteers acquired at 3 T for b-values spanning 1000 to 10,000 s/mm2, for diffusion-encoding directions varying in number from 30 to 256 and for TE ranging from 90 to 120 ms. Our results suggest b-values above 4000 s/mm2 with at least 64 diffusion-encoding directions are adequate to achieve reasonable accuracy with FBI for calculating axon-specific diffusion measures and for performing WM fiber tractography (WMFT).
PMCID:6703926
PMID: 31284026
ISSN: 1095-9572
CID: 4090922
Pan-Cancer Landscape and Analysis of ERBB2 Mutations Identifies Poziotinib as a Clinically Active Inhibitor and Enhancer of T-DM1 Activity
Robichaux, Jacqulyne P; Elamin, Yasir Y; Vijayan, R S K; Nilsson, Monique B; Hu, Lemei; He, Junqin; Zhang, Fahao; Pisegna, Marlese; Poteete, Alissa; Sun, Huiying; Li, Shuai; Chen, Ting; Han, Han; Negrao, Marcelo Vailati; Ahnert, Jordi Rodon; Diao, Lixia; Wang, Jing; Le, Xiuning; Meric-Bernstam, Funda; Routbort, Mark; Roeck, Brent; Yang, Zane; Raymond, Victoria M; Lanman, Richard B; Frampton, Garrett M; Miller, Vincent A; Schrock, Alexa B; Albacker, Lee A; Wong, Kwok-Kin; Cross, Jason B; Heymach, John V
We characterized the landscape and drug sensitivity of ERBB2 (HER2) mutations in cancers. In 11 datasets (n = 211,726), ERBB2 mutational hotspots varied across 25 tumor types. Common HER2 mutants yielded differential sensitivities to eleven EGFR/HER2 tyrosine kinase inhibitors (TKIs) in vitro, and molecular dynamics simulations revealed that mutants with a reduced drug-binding pocket volume were associated with decreased affinity for larger TKIs. Overall, poziotinib was the most potent HER2 mutant-selective TKI tested. Phase II clinical testing in ERBB2 exon 20-mutant non-small cell lung cancer resulted in a confirmed objective response rate of 42% in the first 12 evaluable patients. In pre-clinical models, poziotinib upregulated HER2 cell-surface expression and potentiated the activity of T-DM1, resulting in complete tumor regression with combination treatment.
PMID: 31588020
ISSN: 1878-3686
CID: 4130472
Dynamics of sleep spindles and coupling to slow oscillations following motor learning in adult mice
Kam, Korey; Pettibone, Ward D; Shim, Kaitlyn; Chen, Rebecca K; Varga, Andrew W
Sleep spindles have been implicated in motor learning in human subjects, but their occurrence, timing in relation to cortical slow oscillations, and relationship to offline gains in motor learning have not been examined in animal models. In this study, we recorded EEG over bilateral primary motor cortex in conjunction with EMG for 24 h following a period of either baseline handling or following rotarod motor learning to monitor sleep. We measured several biophysical properties of sleep spindles and their temporal coupling with cortical slow oscillations (SO, <1 Hz) and cortical delta waves (1-4 Hz). Following motor learning, we found an increase in spindles during an early period of NREM sleep (1-4 h) without changes to biophysical properties such as spindle power, peak frequency and coherence. In this same period of early NREM sleep, both SO and delta power increased after motor learning. Notably, a vast majority of spindles were associated with minimal SO power, but in the subset that were associated with significant SO power (>1 z-score above the population mean), spindle-associated SO power was greater in spindles following motor learning compared to baseline sleep. Also, we did not observe a group-level preferred phase in spindle-SO or spindle-delta coupling. While SO power alone was not predictive of motor performance in early NREM sleep, both spindle density and the difference in the magnitude of the mean resultant vector length of the phase angle for SO-associated spindles, a measure of its coupling precision, were positively correlated with offline change in motor performance. These findings support a role for sleep spindles and their coupling to slow oscillations in motor learning and establish a model in which spindle timing and the brain circuits that support offline plasticity can be mechanistically explored.
PMID: 31622665
ISSN: 1095-9564
CID: 4146322
A primal role for the vestibular sense in the development of coordinated locomotion
Ehrlich, David E; Schoppik, David
Mature locomotion requires that animal nervous systems coordinate distinct groups of muscles. The pressures that guide the development of coordination are not well understood. To understand how and why coordination might emerge, we measured the kinematics of spontaneous vertical locomotion across early development in zebrafish (Danio rerio) . We found that zebrafish used their pectoral fins and bodies synergistically during upwards swims. As larvae developed, they changed the way they coordinated fin and body movements, allowing them to climb with increasingly stable postures. This fin-body synergy was absent in vestibular mutants, suggesting sensed imbalance promotes coordinated movements. Similarly, synergies were systematically altered following cerebellar lesions, identifying a neural substrate regulating fin-body coordination. Together these findings link the vestibular sense to the maturation of coordinated locomotion. Developing zebrafish improve postural stability by changing fin-body coordination. We therefore propose that the development of coordinated locomotion is regulated by vestibular sensation.
PMID: 31591962
ISSN: 2050-084x
CID: 4130532
CSF-1 controls cerebellar microglia and is required for motor function and social interaction
Kana, Veronika; Desland, Fiona A; Casanova-Acebes, Maria; Ayata, Pinar; Badimon, Ana; Nabel, Elisa; Yamamuro, Kazuhiko; Sneeboer, Marjolein; Tan, I-Li; Flanigan, Meghan E; Rose, Samuel A; Chang, Christie; Leader, Andrew; Le Bourhis, Hortense; Sweet, Eric S; Tung, Navpreet; Wroblewska, Aleksandra; Lavin, Yonit; See, Peter; Baccarini, Alessia; Ginhoux, Florent; Chitu, Violeta; Stanley, E Richard; Russo, Scott J; Yue, Zhenyu; Brown, Brian D; Joyner, Alexandra L; De Witte, Lotje D; Morishita, Hirofumi; Schaefer, Anne; Merad, Miriam
Microglia, the brain resident macrophages, critically shape forebrain neuronal circuits. However, their precise function in the cerebellum is unknown. Here we show that human and mouse cerebellar microglia express a unique molecular program distinct from forebrain microglia. Cerebellar microglial identity was driven by the CSF-1R ligand CSF-1, independently of the alternate CSF-1R ligand, IL-34. Accordingly, CSF-1 depletion from Nestin+ cells led to severe depletion and transcriptional alterations of cerebellar microglia, while microglia in the forebrain remained intact. Strikingly, CSF-1 deficiency and alteration of cerebellar microglia were associated with reduced Purkinje cells, altered neuronal function, and defects in motor learning and social novelty interactions. These findings reveal a novel CSF-1-CSF-1R signaling-mediated mechanism that contributes to motor function and social behavior.
PMID: 31350310
ISSN: 1540-9538
CID: 4010222
A Biomimetic Synthesis Elucidates the Origin of Preuisolactone A
Novak, Alexander J E; Grigglestone, Claire E; Trauner, Dirk
A short, biomimetic synthesis of the fungal metabolite preuisolactone A is described. Its key steps are a purpurogallin-type (5 + 2)-cycloaddition, followed by fragmentation, vinylogous aldol addition, oxidative lactonization, and a final benzilic acid rearrangement. Our work explains why preuisolactone A has been isolated as a racemate and suggests that the natural product is not a sesquiterpenoid but a phenolic polyketide.
PMID: 31518120
ISSN: 1520-5126
CID: 4175182
Circumsporozoite protein suppresses the IFN-gamma-mediated killing of Plasmodium liver stage through enhanced autophagy related proteins ubiquitination [Meeting Abstract]
Zheng, H; Lu, X; Li, K; Zhu, F; Liu, T; Ding, Y; Fu, Y; Zhang, K; Rodriguez, A; Dai, J; Wu, Y; Xu, W
Malaria is still one of the most devastating diseases worldwide, which is caused by infection of the genus Plasmodium. Liver stage is an essential early step of malaria parasite infection, and plasmodium replicates in parasitophorous vacuole (PV) of hepatocytes at this stage. Although encountering with hepatocyte autonomous immunity, exoerythrocytic forms (EEFs) in PV can still survive and successfully complete infection of hepatocytes. The underlying mechanism is largely unknown. Here, we show that sporozoite circumsporozoite protein (CSP) translocates from the parasitophorous vacuole into the hepatocyte cytoplasm to significantly inhibit the killing of exoerythrocytic forms (EEFs) by interferon-gamma (IFN-gamma). Nitric oxide were found to be indispensable for the resistance to IFN-gamma-mediated killing of EEFs by CSP. Attenuation of the IFN-gamma-mediated killing of EEFs by CSP is dependent on its ability to reduce the levels of ATGs in hepatocytes. The ATGs downregulation occurs through its enhanced ubiquitination mediated by E3 ligase NEDD4, an enzyme that is upregulated by CSP when it translocates from the cytoplasm into the nucleus of hepatocytes via its NLS domain. Thus, we have revealed an unrecognized role of CSP in suppressing host autonomous immunity, and shed new light for a prophylaxis strategy against liver-stage infection
EMBASE:631545479
ISSN: 1521-4141
CID: 4414712
Early assessment of recurrent glioblastoma response to bevacizumab treatment by diffusional kurtosis imaging: a preliminary report
Lee, Chu-Yu; Kalra, Amandeep; Spampinato, Maria V; Tabesh, Ali; Jensen, Jens H; Helpern, Joseph A; de Fatima Falangola, Maria; Van Horn, Mark H; Giglio, Pierre
PURPOSE/OBJECTIVE:The purpose of this preliminary study is to apply diffusional kurtosis imaging to assess the early response of recurrent glioblastoma to bevacizumab treatment. METHODS: < 0.05. RESULTS: = 0.008). CONCLUSIONS:This preliminary study demonstrates that diffusional kurtosis imaging metrics allow the detection of tissue changes 28 days after initiating bevacizumab treatment and that they may provide information about tumor progression.
PMCID:6728698
PMID: 31282311
ISSN: 2385-1996
CID: 4090862