Searched for: Department/Unit:Neuroscience Institute
Network Homeostasis and State Dynamics of Neocortical Sleep
Watson, Brendon O; Levenstein, Daniel; Greene, J Palmer; Gelinas, Jennifer N; Buzsaki, Gyorgy
Sleep exerts many effects on mammalian forebrain networks, including homeostatic effects on both synaptic strengths and firing rates. We used large-scale recordings to examine the activity of neurons in the frontal cortex of rats and first observed that the distribution of pyramidal cell firing rates was wide and strongly skewed toward high firing rates. Moreover, neurons from different parts of that distribution were differentially modulated by sleep substates. Periods of nonREM sleep reduced the activity of high firing rate neurons and tended to upregulate firing of slow-firing neurons. By contrast, the effect of REM was to reduce firing rates across the entire rate spectrum. Microarousals, interspersed within nonREM epochs, increased firing rates of slow-firing neurons. The net result of sleep was to homogenize the firing rate distribution. These findings are at variance with current homeostatic models and provide a novel view of sleep in adjusting network excitability.
PMCID:4873379
PMID: 27133462
ISSN: 1097-4199
CID: 2531212
What is memory? The present state of the engram
Poo, Mu-Ming; Pignatelli, Michele; Ryan, Tomas J; Tonegawa, Susumu; Bonhoeffer, Tobias; Martin, Kelsey C; Rudenko, Andrii; Tsai, Li-Huei; Tsien, Richard W; Fishell, Gord; Mullins, Caitlin; Goncalves, J Tiago; Shtrahman, Matthew; Johnston, Stephen T; Gage, Fred H; Dan, Yang; Long, John; Buzsaki, Gyorgy; Stevens, Charles
The mechanism of memory remains one of the great unsolved problems of biology. Grappling with the question more than a hundred years ago, the German zoologist Richard Semon formulated the concept of the engram, lasting connections in the brain that result from simultaneous "excitations", whose precise physical nature and consequences were out of reach of the biology of his day. Neuroscientists now have the knowledge and tools to tackle this question, however, and this Forum brings together leading contemporary views on the mechanisms of memory and what the engram means today.
PMCID:4874022
PMID: 27197636
ISSN: 1741-7007
CID: 2531292
The Cox-2 Inhibitor Meloxicam Ameliorates Neuroinflammation and Depressive Behavior in Adult Mice after Splenectomy
Haile, Michael; Boutajangout, Allal; Chung, Kevin; Chan, Jeffrey; Stolper, Tanya; Vincent, Nemahun; Batchan, Marc; D'Urso, John; Lin, Yan; Kline, Richard; Yaghmoor, Faris; Jahfal, Saad; Kamal, Robel; Aljohani, Waleed; Blanck, Thomas; Bekker, Alex; Wisniewski, Thomas
BACKGROUND: Peripheral surgical trauma may incite neuroinflammation that leads to neuronal dysfunction associated with both depression and cognitive deficits. In a previous study, we found that adult mice developed neuroinflammation and short-term working memory dysfunction in a delayed, transient manner after splenectomy that was ameliorated by the cyclooxygenase-2 inhibitor meloxicam. We tested the hypothesis that splenectomy in mice would also cause anhedonia, the diminished response to pleasure or rewarding stimuli that is a hallmark of depression, and that treatment with meloxicam would be ameliorative. METHODS: After Institutional Animal Care and Use Committee approval, Swiss-Webster mice underwent sucrose preference training before being randomized into groups on day 0, when they had either splenectomy and anesthesia or anesthesia alone. Within each group, half were randomized to receive intraperitoneal saline at 24 hours, while the other half received intraperitoneal meloxicam at 24 hours. Sucrose preference ratios were determined on days 1, 5, 9, and 14. Additional mice were randomized into groups for brain histochemistry. Specimens were stained for glial fibrillary acidic protein (GFAP), a marker of astrocytes, and CD45, a protein tyrosine phosphatase that identifies microglial activation. RESULTS: On day 5, mice receiving splenectomy and saline demonstrated diminished sucrose preference, which was not seen in mice receiving splenectomy and meloxicam. Semiquantitative analysis of histological slides taken from splenectomized mice treated with meloxicam revealed reduced microglial-based neuroinflammation and reactive astrocytosis compared to mice receiving saline. CONCLUSION: Splenectomy in mice is associated with neuroinflammation and anhedonia, as evidenced by reactive microgliosis, astrocytosis, and behavioral changes. Postsurgical treatment with meloxicam attenuates both neuroinflammation and anhedonia. These findings suggest that cyclooxygenase-2-dependent mechanisms may play a role in the development of postoperative mood disorders, possibly via modulation of peripheral effects on neuroinflammation.
PMCID:5380921
PMID: 28393111
ISSN: 2375-2491
CID: 2527692
Realistic Numerical and Analytical Modeling of Light Scattering in Brain Tissue for Optogenetic Applications(1,2,3)
Yona, Guy; Meitav, Nizan; Kahn, Itamar; Shoham, Shy
In recent years, optogenetics has become a central tool in neuroscience research. Estimating the transmission of visible light through brain tissue is of crucial importance for controlling the activation levels of neurons in different depths, designing optical systems, and avoiding lesions from excessive power density. The Kubelka-Munk model and Monte Carlo simulations have previously been used to model light propagation through rodents' brain tissue, however, these prior attempts suffer from fundamental shortcomings. Here, we introduce and study two modified approaches for modeling the distributions of light emanating from a multimode fiber and scattering through tissue, using both realistic numerical Monte Carlo simulations and an analytical approach based on the beam-spread function approach. We demonstrate a good agreement of the new methods' predictions both with recently published data, and with new measurements in mouse brain cortical slices, where our results yield a new cortical scattering length estimate of approximately 47 microm at lambda = 473 nm, significantly shorter than ordinarily assumed in optogenetic applications.
PMCID:4745178
PMID: 26866055
ISSN: 2373-2822
CID: 2515482
Estimation of the skull insertion loss using an optoacoustic point source [Meeting Abstract]
Estrada, Hector; Rebling, Johannes; Turner, Jake; Kneipp, Moritz; Shoham, Shy; Razansky, Daniel
The acoustically-mismatched skull bone poses significant challenges for the application of ultrasonic and optical techniques in neuroimaging, still typically requiring invasive approaches using craniotomy or skull thinning. Optoacoustic imaging partially circumvents the acoustic distortions due to the skull because the induced wave is transmitted only once as opposed to the round trip in pulse-echo ultrasonography. To this end, the mouse brain has been successfully imaged transcranially by optoacoustic scanning microscopy. Yet, the skull may adversely affect the lateral and axial resolution of transcranial brain images. In order to accurately characterize the complex behavior of the optoacoustic signal as it traverses through the skull, one needs to consider the ultrawideband nature of the optoacoustic signals. Here the insertion loss of murine skull has been measured by means of a hybrid optoacoustic-ultrasound scanning microscope having a spherically focused PVDF transducer and pulsed laser excitation at 532 nm of a 20 pm diameter absorbing microsphere acting as an optoacoustic point source. Accurate modeling of the acoustic transmission through the skull is further performed using a Fourier-domain expansion of a solid-plate model, based on the simultaneously acquired pulse-echo ultrasound image providing precise information about the skull's position and its orientation relative to the optoacoustic source. Good qualitative agreement has been found between the a solid-plate model and experimental measurements. The presented strategy might pave the way for modeling skull effects and deriving efficient correction schemes to account for acoustic distortions introduced by an adult murine skull, thus improving the spatial resolution, effective penetration depth and overall image quality of transcranial optoacoustic brain microscopy.
ISI:000378437000021
ISSN: 0277-786x
CID: 2514452
AN ANALYSIS OF THE EFFECT OF 3D PRINTED RENAL CANCER MODELS ON SURGICAL PLANNING [Meeting Abstract]
Rude, Temitope; Wake, Nicole; Sodickson, Daniel K; Borin, James; Stifelman, Michael; Chandarana, Hersh; Huang, William C
ISI:000375278600474
ISSN: 1527-3792
CID: 2509792
Ultrasonic neuromodulation
Naor, Omer; Krupa, Steve; Shoham, Shy
Ultrasonic waves can be non-invasively steered and focused into mm-scale regions across the human body and brain, and their application in generating controlled artificial modulation of neuronal activity could therefore potentially have profound implications for neural science and engineering. Ultrasonic neuro-modulation phenomena were experimentally observed and studied for nearly a century, with recent discoveries on direct neural excitation and suppression sparking a new wave of investigations in models ranging from rodents to humans. In this paper we review the physics, engineering and scientific aspects of ultrasonic fields, their control in both space and time, and their effect on neuronal activity, including a survey of both the field's foundational history and of recent findings. We describe key constraints encountered in this field, as well as key engineering systems developed to surmount them. In closing, the state of the art is discussed, with an emphasis on emerging research and clinical directions.
PMID: 27153566
ISSN: 1741-2552
CID: 2515512
Low Rank plus Sparse Spatiotemporal MRI: Acceleration, Background Suppression, and Motion Learning
Chapter by: Otazo, Ricardo; Candes, Emmanuel; Sodickson, Daniel K
in: Handbook of robust low-rank and sparse matrix decomposition : applications in image and video processing by Bouwmans, Thierry; Aybat, Necdet Serhat; Zahzah, El-hadi [Eds]
Boca Raton, FL : CRC Press, 2016
pp. 17-1-17-18
ISBN: 1498724620
CID: 2492982
Active Learning in Medicine : A Practical Guide
Oh, So Young; Harnik, Victoria; Berger, Kenneth; Carmody, Ellie; Crowe, Ruth; Czeisler, Barry; Dorsainville, Greg; Givi, Babak; Lee, Sabrina; Ng-Zhao, Lisa; Rapkiewicz, Amy; Rindler, Michael; Rosenthal, Pamela; Sippel, Jack; Skolnick, Adam; Tewksbury, Linda; Torres, Jose
[New York] : NYUSOM Digital Press (Institute for Innovations in Medical Education), 2016
ISBN: n/a
CID: 2490602
Synthetic approaches towards alkaloids bearing alpha-tertiary amines
Hager, Anastasia; Vrielink, Nina; Hager, Dominik; Lefranc, Julien; Trauner, Dirk
Alkaloids account for some of the most beautiful and biologically active natural products. Although they are usually classified along biosynthetic criteria, they can also be categorized according to certain structural motifs. Amongst these, the alpha-tertiary amine (ATA), i.e. a tetrasubstituted carbon atom surrounded by three carbons and one nitrogen, is particularly interesting. A limited number of methods have been described to access this functional group and fewer still are commonly used in synthesis. Herein, we review some approaches to asymmetrically access ATAs and provide an overview of alkaloid total syntheses where those have been employed.
PMID: 26621771
ISSN: 1460-4752
CID: 2484252