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Axonal morphometry of hippocampal pyramidal neurons semi-automatically reconstructed after in vivo labeling in different CA3 locations

Ropireddy, Deepak; Scorcioni, Ruggero; Lasher, Bonnie; Buzsaki, Gyorgy; Ascoli, Giorgio A
Axonal arbors of principal neurons form the backbone of neuronal networks in the mammalian cortex. Three-dimensional reconstructions of complete axonal trees are invaluable for quantitative analysis and modeling. However, digital data are still sparse due to labor intensity of reconstructing these complex structures. We augmented conventional tracing techniques with computational approaches to reconstruct fully labeled axonal morphologies. We digitized the axons of three rat hippocampal pyramidal cells intracellularly filled in vivo from different CA3 sub-regions: two from areas CA3b and CA3c, respectively, toward the septal pole, and one from the posterior/ventral area (CA3pv) near the temporal pole. The reconstruction system was validated by comparing the morphology of the CA3c neuron with that traced from the same cell by a different operator on a standard commercial setup. Morphometric analysis revealed substantial differences among neurons. Total length ranged from 200 (CA3b) to 500 mm (CA3c), and axonal branching complexity peaked between 1 (CA3b and CA3pv) and 2 mm (CA3c) of Euclidean distance from the soma. Length distribution was analyzed among sub-regions (CA3a,b,c and CA1a,b,c), cytoarchitectonic layers, and longitudinal extent within a three-dimensional template of the rat hippocampus. The CA3b axon extended thrice more collaterals within CA3 than into CA1. On the contrary, the CA3c projection was double into CA1 than within CA3. Moreover, the CA3b axon extension was equal between strata oriens and radiatum, while the CA3c axon displayed an oriens/radiatum ratio of 1:6. The axonal distribution of the CA3pv neuron was intermediate between those of the CA3b and CA3c neurons both relative to sub-regions and layers, with uniform collateral presence across CA3/CA1 and moderate preponderance of radiatum over oriens. In contrast with the dramatic sub-region and layer differences, the axon longitudinal spread around the soma was similar for the three neurons. To fully characterize the axonal diversity of CA3 principal neurons will require higher-throughput reconstruction systems beyond the threefold speed-up of the method adopted here
PMCID:3577356
PMID: 21128083
ISSN: 1863-2661
CID: 148902

A bird brain's view of auditory processing and perception

Nagel, Katherine; Kim, Gunsoo; McLendon, Helen; Doupe, Allison
By studying the primary forebrain auditory area of songbirds, field L, using a song-inspired synthetic stimulus and reverse correlation techniques, we found a surprisingly systematic organization of this area, with nearly all neurons narrowly tuned along the spectral dimension, the temporal dimension, or both; there were virtually no strongly orientation-sensitive cells, and in the areas that we recorded, cells broadly tuned in both time and frequency were rare. In addition, cells responsive to fast temporal frequencies predominated only in the field L input layer, suggesting that neurons with fast and slow responses are concentrated in different regions. Together with other songbird data and work from chicks and mammals, these findings suggest that sampling a range of temporal and spectral modulations, rather than orientation in time-frequency space, is the organizing principle of forebrain auditory sensitivity. We then examined the role of these acoustic parameters important to field L organization in a behavioral task. Birds' categorization of songs fell off rapidly when songs were altered in frequency, but, despite the temporal sensitivity of field L neurons, the same birds generalized well to songs that were significantly changed in timing. These behavioral data point out that we cannot assume that animals use the information present in particular neurons without specifically testing perception.
PMCID:3065528
PMID: 20851756
ISSN: 0378-5955
CID: 1072502

Contribution of LPHN3 to the genetic susceptibility to ADHD in adulthood: a replication study

Ribases, M; Ramos-Quiroga, J A; Sanchez-Mora, C; Bosch, R; Richarte, V; Palomar, G; Gastaminza, X; Bielsa, A; Arcos-Burgos, M; Muenke, M; Castellanos, F X; Cormand, B; Bayes, M; Casas, M
Attention-deficit/hyperactivity disorder (ADHD) is a common and highly heritable developmental disorder characterized by a persistent impairing pattern of inattention and/or hyperactivity-impulsivity. Using families from a genetic isolate, the Paisa population from Colombia, and five independent datasets from four different populations (United States, Germany, Norway and Spain), a highly consistent association was recently reported between ADHD and the latrophilin 3 (LPHN3) gene, a brain-specific member of the LPHN subfamily of G-protein-coupled receptors that is expressed in ADHD-related regions, such as amygdala, caudate nucleus, cerebellum and cerebral cortex. To replicate the association between LPHN3 and ADHD in adults, we undertook a case-control association study in 334 adult patients with ADHD and 334 controls with 43 single nucleotide polymorphisms (SNPs) covering the LPNH3 gene. Single- and multiple-marker analyses showed additional evidence of association between LPHN3 and combined type ADHD in adulthood [P = 0.0019; df = 1; odds ratio (OR) = 1.82 (1.25-2.70) and P = 5.1e-05; df = 1; OR = 2.25 (1.52-3.34), respectively]. These results further support the LPHN3 contribution to combined type ADHD, and specifically to the persistent form of the disorder, and point at this new neuronal pathway as a common susceptibility factor for ADHD throughout the lifespan
PMID: 21040458
ISSN: 1601-183x
CID: 134296

A compact statistical model of the song syntax in Bengalese finch

Jin, Dezhe Z; Kozhevnikov, Alexay A
Songs of many songbird species consist of variable sequences of a finite number of syllables. A common approach for characterizing the syntax of these complex syllable sequences is to use transition probabilities between the syllables. This is equivalent to the Markov model, in which each syllable is associated with one state, and the transition probabilities between the states do not depend on the state transition history. Here we analyze the song syntax in Bengalese finch. We show that the Markov model fails to capture the statistical properties of the syllable sequences. Instead, a state transition model that accurately describes the statistics of the syllable sequences includes adaptation of the self-transition probabilities when states are revisited consecutively, and allows associations of more than one state to a given syllable. Such a model does not increase the model complexity significantly. Mathematically, the model is a partially observable Markov model with adaptation (POMMA). The success of the POMMA supports the branching chain network model of how syntax is controlled within the premotor song nucleus HVC, but also suggests that adaptation and many-to-one mapping from the syllable-encoding chain networks in HVC to syllables should be included in the network model.
PMID: 21445230
ISSN: 1553-7358
CID: 3331932

Slitrks as emerging candidate genes involved in neuropsychiatric disorders

Proenca, Catia C; Gao, Kate P; Shmelkov, Sergey V; Rafii, Shahin; Lee, Francis S
Slitrks are a family of structurally related transmembrane proteins belonging to the leucine-rich repeat (LRR) superfamily. Six family members exist (Slitrk1-6) and all are highly expressed in the central nervous system (CNS). Slitrks have been implicated in mediating basic neuronal processes, ranging from neurite outgrowth and dendritic elaboration to neuronal survival. Recent studies in humans and genetic mouse models have led to the identification of Slitrks as candidate genes that might be involved in the development of neuropsychiatric conditions, such as obsessive compulsive spectrum disorders and schizophrenia. Although these system-level approaches have suggested that Slitrks play prominent roles in CNS development, key questions remain regarding the molecular mechanisms through which they mediate neuronal signaling and connectivity
PMCID:3051006
PMID: 21315458
ISSN: 1878-108x
CID: 137418

The Use of Extracorporeal Techniques in Acute Acetaminophen (Paracetamol) Poisoning [Meeting Abstract]

Holubek, W. J.; Kemp, B. O.; Goldfarb, D. S.; Nelson, L. S.; Hoffman, R. S.
ISI:000289628600221
ISSN: 1556-3650
CID: 131938

Developing a global strategy to prevent Alzheimer's disease: Leon Thal Symposium 2010

Khachaturian, Zaven S; Petersen, Ronald C; Snyder, Peter J; Khachaturian, Ara S; Aisen, Paul; de Leon, Mony; Greenberg, Barry D; Kukull, Walter; Maruff, Paul; Sperling, Reisa A; Stern, Yaakov; Touchon, Jacques; Vellas, Bruno; Andrieu, Sandrine; Weiner, Michael W; Carrillo, Maria C; Bain, Lisa J
The fourth Leon Thal Symposium (LTS2010) was convened in Toulouse, France, on November 3, 2010. This symposium reviewed design parameters that are necessary to develop comprehensive national databases on healthy aging. Such datasets offer the potential to serve as the foundation for a systems-approach to solve the dual public health problems of: (1) early detection of people who are at elevated risk for Alzheimer's disease, and (2) the development of interventions to delay onset of, or prevent, late-life dementia. The symposium considered three interrelated components of a National Database for Longitudinal Studies on Healthy Aging as follows: (a) a registry of healthy aging adults; (b) refined computer-based assessments for data gathering, including assessments of behavioral/memory changes associated with aging that are appropriate for broad use in nonexpert settings; and (c) high performance computing/supercomputer-based approaches for health data modeling and mining
PMID: 21414553
ISSN: 1552-5279
CID: 134236

Estimation of tensors and tensor-derived measures in diffusional kurtosis imaging

Tabesh, Ali; Jensen, Jens H; Ardekani, Babak A; Helpern, Joseph A
This article presents two related advancements to the diffusional kurtosis imaging estimation framework to increase its robustness to noise, motion, and imaging artifacts. The first advancement substantially improves the estimation of diffusion and kurtosis tensors parameterizing the diffusional kurtosis imaging model. Rather than utilizing conventional unconstrained least squares methods, the tensor estimation problem is formulated as linearly constrained linear least squares, where the constraints ensure physically and/or biologically plausible tensor estimates. The exact solution to the constrained problem is found via convex quadratic programming methods or, alternatively, an approximate solution is determined through a fast heuristic algorithm. The computationally more demanding quadratic programming-based method is more flexible, allowing for an arbitrary number of diffusion weightings and different gradient sets for each diffusion weighting. The heuristic algorithm is suitable for real-time settings such as on clinical scanners, where run time is crucial. The advantage offered by the proposed constrained algorithms is demonstrated using in vivo human brain images. The proposed constrained methods allow for shorter scan times and/or higher spatial resolution for a given fidelity of the diffusional kurtosis imaging parametric maps. The second advancement increases the efficiency and accuracy of the estimation of mean and radial kurtoses by applying exact closed-form formulae. Magn Reson Med, 2011. (c) 2010 Wiley-Liss, Inc
PMCID:3042509
PMID: 21337412
ISSN: 1522-2594
CID: 124090

Electron tomography of paranodal septate-like junctions and the associated axonal and glial cytoskeletons in the central nervous system

Nans, Andrea; Einheber, Steven; Salzer, James L; Stokes, David L
The polarized domains of myelinated axons are specifically organized to maximize the efficiency of saltatory conduction. The paranodal region is directly adjacent to the node of Ranvier and contains specialized septate-like junctions that provide adhesion between axons and glial cells and that constitute a lateral diffusion barrier for nodal components. To complement and extend earlier studies on the peripheral nervous system, electron tomography was used to image paranodal regions from the central nervous system (CNS). Our three-dimensional reconstructions revealed short filamentous linkers running directly from the septate-like junctions to neurofilaments, microfilaments, and organelles within the axon. The intercellular spacing between axons and glia was measured to be 7.4 +/- 0.6 nm, over twice the value previously reported in the literature (2.5-3.0 nm). Averaging of individual junctions revealed a bifurcated structure in the intercellular space that is consistent with a dimeric complex of cell adhesion molecules composing the septate-like junction. Taken together, these findings provide new insight into the structural organization of CNS paranodes and suggest that, in addition to providing axo-glial adhesion, cytoskeletal linkage to the septate-like junctions may be required to maintain axonal domains and to regulate organelle transport in myelinated axons. (c) 2010 Wiley-Liss, Inc
PMCID:3128832
PMID: 21259318
ISSN: 1097-4547
CID: 121328

Crocipodin, a benzotropolone pigment from the mushroom Leccinum crocipodium (Boletales)

Kerschensteiner, Lydia; Loebermann, Florian; Steglich, Wolfgang; Trauner, Dirk
Crocipodin, an unusual benzotropolone pigment, has been isolated from the fruit bodies of the mushroom Leccinum crocipodium. Its structure was determined by spectroscopic methods, particularly 2D NMR spectroscopy. The structure was confirmed by total synthesis, starting from 4-bromocatechol and gallic acid. (C) 2010 Elsevier Ltd. All rights reserved.
ISI:000287435900003
ISSN: 0040-4020
CID: 2486262