Searched for: school:SOM
Department/Unit:Neuroscience Institute
An empirical EEG analysis in brain death diagnosis for adults
Chen, Zhe; Cao, Jianting; Cao, Yang; Zhang, Yue; Gu, Fanji; Zhu, Guoxian; Hong, Zhen; Wang, Bin; Cichocki, Andrzej
Electroencephalogram (EEG) is often used in the confirmatory test for brain death diagnosis in clinical practice. Because EEG recording and monitoring is relatively safe for the patients in deep coma, it is believed to be valuable for either reducing the risk of brain death diagnosis (while comparing other tests such as the apnea) or preventing mistaken diagnosis. The objective of this paper is to study several statistical methods for quantitative EEG analysis in order to help bedside or ambulatory monitoring or diagnosis. We apply signal processing and quantitative statistical analysis for the EEG recordings of 32 adult patients. For EEG signal processing, independent component analysis (ICA) was applied to separate the independent source components, followed by Fourier and time-frequency analysis. For quantitative EEG analysis, we apply several statistical complexity measures to the EEG signals and evaluate the differences between two groups of patients: the subjects in deep coma, and the subjects who were categorized as brain death. We report statistically significant differences of quantitative statistics with real-life EEG recordings in such a clinical study, and we also present interpretation and discussions on the preliminary experimental results.
PMCID:2518749
PMID: 19003489
ISSN: 1871-4080
CID: 2617652
Whole-brain N-acetylaspartate MR spectroscopic quantification: performance comparison of metabolite versus lipid nulling
Hovener, J-B; Rigotti, D J; Amann, M; Liu, S; Babb, J S; Bachert, P; Gass, A; Grossman, R I; Gonen, O
BACKGROUND AND PURPOSE: Despite the prominent peak of N-acetylaspartate (NAA) in proton MR spectroscopy ((1)H-MR spectroscopy) of the adult brain and its almost exclusive presence in neuronal cells, the total amount of NAA, regarded as their marker, is difficult to obtain due to signal contamination from the skull lipids. This article compares the performance of 2 methods that overcome this difficulty to yield the whole-brain NAA signal, important for the assessment of the total disease load in diffuse neurologic disorders. MATERIALS AND METHODS: The heads of 12 healthy volunteers, 3 women and 9 men, 31.0 +/- 7.1 years of age, were scanned at 3T by using 2 nonlocalizing (1)H-MR spectroscopy sequences: One nulls the NAA (TI = 940 ms) every second acquisition by inversion-recovery to cancel the signals of the lipids (T1 << TI) in an add-subtract scheme. The other nulls the signal of the lipids (TI = 155 ms) directly after each acquisition, requiring half as many averages for the same signal-to-noise ratio. Each sequence was repeated 3 times back-to-back on 3 occasions, and the comparison criteria were intrasubject precision (reproducibility) and total measurement duration. RESULTS: NAA nulling is nearly twice as precise in its intrinsic back-to-back (5.8% versus 8.6%) as well as longitudinal (10.6% versus 19.7%) coefficients of variation compared with lipid nulling, but at the cost of double the acquisition time. CONCLUSION: When speed is a more stringent requirement than precision, the new lipid-nulling sequence is a viable alternative. For precision in cross-sectional or longitudinal global NAA quantification, however, NAA nulling is still the approach of choice despite its x2 ( approximately 5 minutes) time penalty compared with the lipid-nulling approach
PMCID:2576739
PMID: 18556356
ISSN: 1936-959x
CID: 93322
The genetics of early telencephalon patterning: some assembly required
Hebert, Jean M; Fishell, Gord
The immense range of human behaviours is rooted in the complex neural networks of the cerebrum. The creation of these networks depends on the precise integration of specific neuronal subtypes that are born in different regions of the telencephalon. Here, using the mouse as a model system, we review how these proliferative zones are established. Moreover, we discuss how these regions can be traced back in development to the function of a few key genes, including those that encode fibroblast growth factors (FGFs), sonic hedgehog (SHH), bone morphogenetic proteins (BMPs), forkhead box G1 (FOXG1), paired box 6 (PAX6) and LIM homeobox protein 2 (LHX2), that pattern the early telencephalon
PMCID:2669317
PMID: 19143049
ISSN: 1471-003x
CID: 149521
Dysregulation of mTOR signaling in mouse model of fragile X syndrome [Meeting Abstract]
Sharma, A; Takayasu, Y; Hoeffer, CA; Miyawaki, T; McBride, SM; Klann, E; Zukin, RS
ISI:000259544800158
ISSN: 0028-3908
CID: 98125
Alzheimer's & Dementia: the Journal of the Alzheimer's Association [Editorial]
Khachaturian, Zaven S
PMID: 18790457
ISSN: 1552-5279
CID: 142914
Terminology for neuroscience data discovery: multi-tree syntax and investigator-derived semantics
Gardner, Daniel; Goldberg, David H; Grafstein, Bernice; Robert, Adrian; Gardner, Esther P
The Neuroscience Information Framework (NIF), developed for the NIH Blueprint for Neuroscience Research and available at http://nif.nih.gov and http://neurogateway.org , is built upon a set of coordinated terminology components enabling data and web-resource description and selection. Core NIF terminologies use a straightforward syntax designed for ease of use and for navigation by familiar web interfaces, and readily exportable to aid development of relational-model databases for neuroscience data sharing. Datasets, data analysis tools, web resources, and other entities are characterized by multiple descriptors, each addressing core concepts, including data type, acquisition technique, neuroanatomy, and cell class. Terms for each concept are organized in a tree structure, providing is-a and has-a relations. Broad general terms near each root span the category or concept and spawn more detailed entries for specificity. Related but distinct concepts (e.g., brain area and depth) are specified by separate trees, for easier navigation than would be required by graph representation. Semantics enabling NIF data discovery were selected at one or more workshops by investigators expert in particular systems (vision, olfaction, behavioral neuroscience, neurodevelopment), brain areas (cerebellum, thalamus, hippocampus), preparations (molluscs, fly), diseases (neurodegenerative disease), or techniques (microscopy, computation and modeling, neurogenetics). Workshop-derived integrated term lists are available Open Source at http://brainml.org ; a complete list of participants is at http://brainml.org/workshops
PMCID:2663521
PMID: 18958630
ISSN: 1559-0089
CID: 138478
AMPA receptor-dependent H2O2 generation in striatal medium spiny neurons but not dopamine axons: one source of a retrograde signal that can inhibit dopamine release
Avshalumov, Marat V; Patel, Jyoti C; Rice, Margaret E
Dopamine-glutamate interactions in the striatum are critical for normal basal ganglia-mediated control of movement. Although regulation of glutamatergic transmission by dopamine is increasingly well understood, regulation of dopaminergic transmission by glutamate remains uncertain given the apparent absence of ionotropic glutamate receptors on dopaminergic axons in dorsal striatum. Indirect evidence suggests glutamatergic regulation of striatal dopamine release is mediated by a diffusible messenger, hydrogen peroxide (H2O2), generated downstream from glutamatergic AMPA receptors (AMPARs). The mechanism of H2O2-dependent inhibition of dopamine release involves activation of ATP-sensitive K+ (KATP) channels. However, the source of modulatory H2O2 is unknown. Here, we used whole cell recording, fluorescence imaging of H2O2, and voltammetric detection of evoked dopamine release in guinea pig striatal slices to examine contributions from medium spiny neurons (MSNs), the principal neurons of striatum, and dopamine axons to AMPAR-dependent H2O2 generation. Imaging studies of H2O2 generation in MSNs provide the first demonstration of AMPAR-dependent H2O2 generation in neurons in the complex brain-cell microenvironment of brain slices. Stimulation-induced increases in H2O2 in MSNs were prevented by GYKI-52466, an AMPAR antagonist, or catalase, an H2O2 metabolizing enzyme, but amplified by mercaptosuccinate (MCS), a glutathione peroxidase inhibitor. By contrast, dopamine release evoked by selective stimulation of dopamine axons was unaffected by GYKI-52466 or MCS, arguing against dopamine axons as a significant source of modulatory H2O2. Together, these findings suggest that glutamatergic regulation of dopamine release via AMPARs is mediated through retrograde signaling by diffusible H2O2 generated in striatal cells, including medium spiny neurons, rather than in dopamine axons
PMCID:2544473
PMID: 18632893
ISSN: 0022-3077
CID: 93338
Voxel-shift and interpolation for hadamard-encoded MR images
Fleysher, Lazar; Fleysher, Roman; Liu, Songtao; Gonen, Oded
Although Fourier gradient phase-encoding and Hadamard radio-frequency encoding are two established spatial MR localization techniques, the absence of voxel-shift and interpolation postprocessing algorithms for the latter has always placed it at a discouraging disadvantage. This article presents a method for voxel-shift and interpolation of Hadamard-encoded data and demonstrates both theoretically and experimentally the similarities of the respective operations between the two localization methods
PMCID:2562325
PMID: 18727037
ISSN: 1522-2594
CID: 93216
Of self and self-awareness: The basic neuronal circuit in human consciousness and the generation of self [Comment]
Llinas, Rodolfo
Comments on an article by U. Awret (see record 2008-14313-001). The fascination of Velasquez's painting Las Meninas stems largely from the ambiguous relationship between the painting as a whole, viewed by a single perceiver, and the variety of different perceptual viewpoints it invites. This situation resonates strongly with a central puzzle in the study of consciousness: the apparent unity of perceptual experience despite multiple sense modalities. Understanding more of this latter might help to explain the way we respond to the painting. Given that sensory inputs generate but a fractured representation of universals, the issue of perceptual unity concerns the mechanisms that allow these different sensory components to be gathered into one global image. In recent years, this has been described as 'binding', to be implemented by temporal conjunction. Alternatively, since categorizations are generated by spatial mapping of the primary sensory cortex and its associated cortical structures, a more dynamic interaction based on temporal coherence may generate dissipative functional structures capable of a rapid a change as the perception they generate. Thus, a simultaneity mapping may be envisioned that takes advantage of the parallel and synchronous organization of the brain networks in order to generate perception.
PSYCH:2008-14313-007
ISSN: 1355-8250
CID: 93519
A neural coding scheme formed by the combined function of gamma and theta oscillations
Lisman, John; Buzsaki, Gyorgy
Brain oscillations are important in controlling the timing of neuronal firing. This process has been extensively analyzed in connection with gamma frequency oscillations and more recently with respect to theta frequency oscillations. Here we review evidence that theta and gamma oscillations work together to form a neural code. This coding scheme provides a way for multiple neural ensembles to represent an ordered sequence of items. In the hippocampus, this coding scheme is utilized during the phase precession, a phenomenon that can be interpreted as the recall of sequences of items (places) from long-term memory. The same coding scheme may be used in certain cortical regions to encode multi-item short-term memory. The possibility that abnormalities in theta/gamma could underlie symptoms of schizophrenia is discussed
PMCID:2518638
PMID: 18559405
ISSN: 0586-7614
CID: 148921