Searched for: school:SOM
Department/Unit:Neuroscience Institute
Nonresective surgical management of refractory epilepsy : callosotomy and vagal stimulation
Chapter by: Madsen, Joseph R; Louie, Kenway
in: Principles and practice of pediatric neurosurgery by Albright, A; Adelson, P; Pollack, Ian F (Eds)
New York : Thieme, 2008
pp. 1096-1114
ISBN: 9783131146922
CID: 3702942
LV motion and strain computation from tMRI based on meshless deformable models
Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Metaxas, Dimitris; Axel, Leon
We propose a novel meshless deformable model for in vivo Left Ventricle (LV) 3D motion estimation and analysis based on tagged MRI (tMRI). The meshless deformable model can capture global deformations such as contraction and torsion with a few parameters, while track local deformations with Laplacian representation. In particular, the model performs well even when the control points (tag intersections) are relatively sparse. We test the performance of the meshless model on a numeric phantom, as well as in vivo heart data of healthy subjects and patients. The experimental results show that the meshless deformable model can fully recover the myocardial motion and strain in 3D
PMID: 18979800
ISSN: 0302-9743
CID: 93969
Single and rare cell analysis-amplification methods. T7 based amplification protocols
Chapter by: Ginsberg, Stephen D
in: Microarrays in inflammation by Bosio, Andreas; Gerstmayer, Bernhard [Eds]
Basel : Birkhäuser, c2008
pp. 81-94
ISBN: 9783764383343
CID: 448572
Reducing statistical dependencies in natural signals using radial Gaussianization
Lyu, Siwei; Simoncelli, Eero P
We consider the problem of transforming a signal to a representation in which the components are statistically independent. When the signal is generated as a linear transformation of independent Gaussian or non-Gaussian sources, the solution may be computed using a linear transformation (PCA or ICA, respectively). Here, we consider a complementary case, in which the source is non-Gaussian but elliptically symmetric. Such a source cannot be decomposed into independent components using a linear transform, but we show that a simple nonlinear transformation, which we call radial Gaussianization (RG), is able to remove all dependencies. We apply this methodology to natural signals, demonstrating that the joint distributions of nearby bandpass filter responses, for both sounds and images, are closer to being elliptically symmetric than linearly transformed factorial sources. Consistent with this, we demonstrate that the reduction in dependency achieved by applying RG to either pairs or blocks of bandpass filter responses is significantly greater than that achieved by PCA or ICA.
PMCID:4199336
PMID: 25328365
ISSN: 1049-5258
CID: 1931312
Medical image computing and computer-assisted intervention--MICCAI2008. Preface
Metaxas, Dimitris; Axel, Leon; Fichtinger, Gabor; Szekely, Gabor
PMID: 18979724
ISSN: 0302-9743
CID: 93971
MicroRNA (miRNA) expression profiling using the miRNA signature sequence amplification (SSAM) technology in human postmortem brain tissues and in animal models of neurodegeneration [Meeting Abstract]
Che, S.; Ginsberg, S. D.
BIOSIS:PREV201200148907
ISSN: 1558-3635
CID: 459232
Dynamic aspects of motor coordination in ensembles of skilled musicians [Meeting Abstract]
Chen, Jessie; Moore, GP; Naill R
ORIGINAL:0007459
ISSN: 1558-3635
CID: 162616
Mechanistic investigations of the acid-catalyzed cyclization of a vinyl ortho-quinone methide
Bishop, Lee M; Winkler, Michael; Houk, Kendall N; Bergman, Robert G; Trauner, Dirk
PMID: 18449871
ISSN: 0947-6539
CID: 2485362
Gender differences in the expression of NGF receptors in single cholinergic nucleus basalis neurons during the progression of Alzheimer's disease [Meeting Abstract]
Counts, S. E.; Che, S.; Ginsberg, S. D.; Mufson, E. J.
BIOSIS:PREV201200172882
ISSN: 1558-3635
CID: 459162
Active volume models with probabilistic object boundary prediction module
Shen, Tian; Zhu, Yaoyao; Huang, Xiaolei; Huang, Junzhou; Metaxas, Dimitris; Axel, Leon
We propose a novel Active Volume Model (AVM) which deforms in a free-form manner to minimize energy. Unlike Snakes and level-set active contours which only consider curves or surfaces, the AVM is a deforming object model that has both boundary and an interior area. When applied to object segmentation and tracking, the model alternates between two basic operations: deform according to current object prediction, and predict according to current appearance statistics of the model. The probabilistic object prediction module relies on the Bayesian Decision Rule to separate foreground (i.e., object represented by the model) and background. Optimization of the model is a natural extension of the Snakes model so that region information becomes part of the external forces. The AVM thus has the efficiency of Snakes while having adaptive region-based constraints. Segmentation results, validation, and comparison with GVF Snakes and level set methods are presented for experiments on noisy 2D/3D medical images
PMID: 18979764
ISSN: 0302-9743
CID: 93970