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school:SOM

Department/Unit:Neuroscience Institute

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13461


Gene expression abnormalities mark the progression of Alzheimer's disease

Chapter by: Ginsberg, SD; Che, S; Counts, SE; Mufson, EJ
in: Research progress in Alzheimer and dementia : [Vol. 3] by Sun, Maio-Kun [Eds]
Hauppauge, N.Y. : Nova Biomedical ; Lancaster : Gazelle [distributor], 2008
pp. 25-58
ISBN: 1600219608
CID: 448582

Single cell gene expression analysis in human postmortem brain tissues and animal models of neurodegeneration

Chapter by: Ginsberg, Stephen D
in: Biomacromolecular mass spectrometry research progress by Koenig, Simone [Eds]
New York : Nova Science Publishers, c2008
pp. 109-110
ISBN: 1604564873
CID: 453022

Growth factors and psychiatric disorders. Introduction

Chao, Moses
PMID: 18497091
ISSN: 1528-2511
CID: 80614

Dynamic aspects of motor coordination in ensembles of skilled musicians [Meeting Abstract]

Chen, Jessie; Moore, GP; Naill R
ORIGINAL:0007459
ISSN: 1558-3635
CID: 162616

2081 Characterization of dysfunction in LVH with tagged MRI [Meeting Abstract]

Axel, Leon; Babb, James; Chen, Ting; Chung, Sohae; Guillaume, Melissa; Srichai, Monvadi B
ORIGINAL:0012462
ISSN: 1097-6647
CID: 2932352

Nonlinear Image Representation Using Divisive Normalization

Lyu, Siwei; Simoncelli, Eero P
In this paper, we describe a nonlinear image representation based on divisive normalization that is designed to match the statistical properties of photographic images, as well as the perceptual sensitivity of biological visual systems. We decompose an image using a multi-scale oriented representation, and use Student's t as a model of the dependencies within local clusters of coefficients. We then show that normalization of each coefficient by the square root of a linear combination of the amplitudes of the coefficients in the cluster reduces statistical dependencies. We further show that the resulting divisive normalization transform is invertible and provide an efficient iterative inversion algorithm. Finally, we probe the statistical and perceptual advantages of this image representation by examining its robustness to added noise, and using it to enhance image contrast.
PMCID:4207373
PMID: 25346590
ISSN: 1063-6919
CID: 1931322

Self-assembly of a DNA dodecahedron from 20 trisoligonucleotides with C(3h) linkers

Zimmermann, Jan; Cebulla, Martin P J; Monninghoff, Sven; von Kiedrowski, Gunter
PMID: 18383496
ISSN: 1521-3773
CID: 2471872

Influence of visual guidance on posterior parietal cortex responses to prehension [Meeting Abstract]

Chen, J.; Gardner, E. P.
BIOSIS:PREV201200172030
ISSN: 1558-3635
CID: 162607

Galanin hyperinnervation upregulates choline acetyltransferase expression in cholinergic basal forebrain neurons in Alzheimer's disease

Counts, Scott E; He, Bin; Che, Shaoli; Ginsberg, Stephen D; Mufson, Elliott J
BACKGROUND: Fibers containing galanin (GAL) enlarge and hyperinnervate cholinergic basal forebrain (CBF) nucleus basalis (NB) neurons in late-stage Alzheimer's disease (AD), yet the physiological consequences of this phenomenon are unclear. OBJECTIVE: To determine whether GAL hyperinnervation of cholinergic NB neurons modulates the expression of genes critical to cholinergic transmission [e.g. acetylcholine (ACh) metabolism and ACh receptors] in AD. METHODS: Single-cell gene expression profiling was used to compare cholinergic mRNA levels in non-GAL-hyperinnervated NB neurons in tissue autopsied from cases classified as having no cognitive impairment (NCI) or late-stage AD (AD/GAL-) and in GAL-hyperinnervated (AD/GAL+) NB neurons from the same AD subjects. RESULTS: AD/GAL+ cells displayed a significant upregulation in choline acetyltransferase (ChAT) mRNA expression compared to NCI and AD/GAL- cells. CONCLUSION: GAL fiber hyperinnervation of cholinergic NB neurons upregulates the expression of ChAT, the synthetic enzyme for ACh, suggesting that GAL regulates the cholinergic tone of CBF neurons in AD
PMCID:2826456
PMID: 18322398
ISSN: 1660-2862
CID: 135335

Single and rare cell analysis-amplification methods. T7 based amplification protocols

Chapter by: Ginsberg, Stephen D
in: Microarrays in inflammation by Bosio, Andreas; Gerstmayer, Bernhard [Eds]
Basel : Birkhäuser, c2008
pp. 81-94
ISBN: 9783764383343
CID: 448572