Searched for: Department/Unit:Cell Biology
Population genomics of the immune evasion (var) genes of Plasmodium falciparum (vol 3, pg e70, 2007) [Correction]
Barry, Alyssa E; Leliwa-Sytek, Aleksandra; Tavul, Livingston; Imrie, Heather; Migot-Nabias, Florence; Brown, Stuart M; McVean, Gil; Day, Karen P
ISI:000248511100016
ISSN: 1553-7366
CID: 2657932
Release of macrophage migration inhibitory factor from the lung: Association with increased mortality in sepsis [Meeting Abstract]
Miller, Edmund J; Ojamaa, Kaie; Hu, Maowen; Lin, Xinchun; Metz, Christine N; Al-Abed, Yousef; Lee, Hans; Ruskin, Greg; Hussain, Erfan; Jacobs, Mitchel
ISI:000251398900162
ISSN: 0090-3493
CID: 2635942
Sonic Hedgehog (SHH) role in dorsal midbrain proliferation in vertebrates [Meeting Abstract]
Feijoo, Carmen; Lois, Pablo; Araya, Francisco; Palma, Veronica
ISI:000247120500116
ISSN: 0012-1606
CID: 2559542
Drosophila mitochondrial membrane-bound tafazzin protein is a transacylase [Meeting Abstract]
Xu, Yang; Ren, Mindong; Malhotra, Ashim; Lee, Louis; Zhang, Jin; Blanck, Thomas JJ; Schlame, Michael
ISI:000245708505348
ISSN: 0892-6638
CID: 2544842
Purification and characterization of drosophila taffazin: Discovery of the first phospholipid transacylase [Meeting Abstract]
Malhotra, Ashim; Xu, Yang; Ren, Mindong; Schlame, Michael
ISI:000245708505343
ISSN: 0892-6638
CID: 2544832
COLL 394-Mechanical response from normal and transformed cells and their ECM fibers [Meeting Abstract]
Pernodet, Nadine; Fields, Jessica; Fields, Adam; Jurukovski, Vladimir; Ramek, Alex; Mironava, Tatsiana; Ghosh, Kaustabh; Bernheim, Taylor; Hall, Kristin; Ge, Shouren; Slutsky, Lenny; Simon, Marcia; Rafailovich, Miriam
ISI:000207593902073
ISSN: 0065-7727
CID: 2503412
The presence of B-type natriuretic peptide in burns and the responsiveness of fibroblasts to BNP: proof of principle
Singer, Adam J; Jurukovski, Vladimir; Simon, Marcia; Ma, Jing Ying; Protter, Andrew; Arura, Balvantray; Soroff, Harry S
BACKGROUND: B-type natriuretic peptide (BNP) released from cardiac myocytes plays an important role in cardiac homeostasis through cyclic guanosine monophosphate (cGMP) activation. BNP also reduces cardiac remodeling and fibrosis. The antifibrotic effects of BNP are mediated in part by blocking the effects of transforming growth factor beta, a profibrotic cytokine that plays a significant role in cutaneous wound healing. It is unclear if BNP plays any role in cutaneous wound healing. OBJECTIVES: To investigate if BNP levels would be elevated in thermally injured human skin and if human-derived fibroblasts would respond to BNP exposure by increasing levels of cGMP. METHODS: This was an in vitro analysis of human skin. Skin samples and cells were collected from patients with and without thermal injury. The authors stained three skin samples from normal skin (taken at the time of elective cosmetic surgery) with antibodies to BNP and compared these with three tissue samples obtained from burned human skin taken during tangential excision of deep burns. Normal human-derived fibroblasts and keratinocytes were exposed in triplicate to BNP in vitro, and cGMP accumulation was evaluated. Levels of cGMP were quantified and compared with analysis of variance. RESULTS: BNP was present in all specimens of thermally injured skin (especially around collagen, epithelial cells, and endothelial cells) but not in any uninjured skin samples (p = 0.05, single-tailed Fisher's exact test). In vitro grown fibroblasts showed significant increases of cGMP levels with increasing levels of BNP exposure (mean [+/-SD]: 0.6 [+/-0.3], 1.2 [+/-0.2], 4.6 [+/-0.1], and 5.0 [+/-0.9] pmol/mL with BNP concentrations of 0, 10, 500, and 1,000 nmol/L, respectively; p < 0.001). The effect of BNP on keratinocytes was minimal and below the level of quantification. CONCLUSIONS: These findings demonstrate proof of principle that human fibroblasts are responsive to the effects of BNP in vitro and that BNP is present in injured skin, suggesting that BNP may play a role in cutaneous wound healing.
PMID: 17446197
ISSN: 1553-2712
CID: 2503212
ATF2 is required for amino acid-regulated transcription by orchestrating specific histone acetylation
Bruhat, Alain; Cherasse, Yoan; Maurin, Anne-Catherine; Breitwieser, Wolfgang; Parry, Laurent; Deval, Christiane; Jones, Nic; Jousse, Celine; Fafournoux, Pierre
The transcriptional activation of CHOP (a CCAAT/enhancer-binding protein-related gene) by amino acid deprivation involves the activating transcription factor 2 (ATF2) and the activating transcription factor 4 (ATF4) binding the amino acid response element (AARE) within the promoter. Using a chromatin immunoprecipitation approach, we report that in vivo binding of phospho-ATF2 and ATF4 to CHOP AARE are associated with acetylation of histones H4 and H2B in response to amino acid starvation. A time course analysis reveals that ATF2 phosphorylation precedes histone acetylation, ATF4 binding and the increase in CHOP mRNA. We also show that ATF4 binding and histone acetylation are two independent events that are required for the CHOP induction upon amino acid starvation. Using ATF2-deficient mouse embryonic fibroblasts, we demonstrate that ATF2 is essential in the acetylation of histone H4 and H2B in vivo. The role of ATF2 on histone H4 acetylation is dependent on its binding to the AARE and can be extended to other amino acid regulated genes. Thus, ATF2 is involved in promoting the modification of the chromatin structure to enhance the transcription of a number of amino acid-regulated genes.
PMCID:1851658
PMID: 17267404
ISSN: 1362-4962
CID: 2503742
TRB3 inhibits the transcriptional activation of stress-regulated genes by a negative feedback on the ATF4 pathway
Jousse, Celine; Deval, Christiane; Maurin, Anne-Catherine; Parry, Laurent; Cherasse, Yoan; Chaveroux, Cedric; Lefloch, Renaud; Lenormand, Philippe; Bruhat, Alain; Fafournoux, Pierre
The integrated stress response (ISR) is defined as a highly conserved response to several stresses that converge to the induction of the activating transcription factor 4 (ATF4). Because an uncontrolled response may have deleterious effects, cells have elaborated several negative feedback loops that attenuate the ISR. In the present study, we describe how induction of the human homolog of Drosophila tribbles (TRB3) attenuates the ISR by a negative feedback mechanism. To investigate the role of TRB3 in the control of the ISR, we used the regulation of gene expression by amino acid limitation as a model. The enhanced production of ATF4 upon amino acid starvation results in the induction of a large number of target genes like CHOP (CAAT/enhancer-binding protein-homologous protein), asparagine synthetase (ASNS), or TRB3. We demonstrate that TRB3 overexpression inhibits the transcriptional induction of CHOP and ASNS whereas TRB3 silencing induces the expression of these genes both under normal and stressed conditions. In addition, transcriptional profiling experiments show that TRB3 affects the expression of many ISR-regulated genes. Our results also suggest that TRB3 and ATF4 belong to the same protein complex bound to the sequence involved in the ATF4-dependent regulation of gene expression by amino acid limitation. Collectively, our data identify TRB3 as a negative feedback regulator of the ATF4-dependent transcription and participates to the fine regulation of the ISR.
PMID: 17369260
ISSN: 0021-9258
CID: 2503732
The p300/CBP-associated factor (PCAF) is a cofactor of ATF4 for amino acid-regulated transcription of CHOP
Cherasse, Yoan; Maurin, Anne-Catherine; Chaveroux, Cedric; Jousse, Celine; Carraro, Valerie; Parry, Laurent; Deval, Christiane; Chambon, Christophe; Fafournoux, Pierre; Bruhat, Alain
When an essential amino acid is limited, a signaling cascade is triggered that leads to increased translation of the 'master regulator', activating transcription factor 4 (ATF4), and resulting in the induction of specific target genes. Binding of ATF4 to the amino acid response element (AARE) is an essential step in the transcriptional activation of CHOP (a CCAAT/enhancer-binding protein-related gene) by amino acid deprivation. We set out to identify proteins that interact with ATF4 and that play a role in the transcriptional activation of CHOP. Using a tandem affinity purification (TAP) tag approach, we identified p300/CBP-associated factor (PCAF) as a novel interaction partner of ATF4 in leucine-starved cells. We show that the N-terminal region of ATF4 is required for a direct interaction with PCAF and demonstrate that PCAF is involved in the full transcriptional response of CHOP by amino acid starvation. Chromatin immunoprecipitation analysis revealed that PCAF is engaged on the CHOP AARE in response to amino acid starvation and that ATF4 is essential for its recruitment. We also show that PCAF stimulates ATF4-driven transcription via its histone acetyltransferase domain. Thus PCAF acts as a coactivator of ATF4 and is involved in the enhancement of CHOP transcription following amino acid starvation.
PMCID:2034469
PMID: 17726049
ISSN: 1362-4962
CID: 2503722