Searched for: school:SOM
Department/Unit:Cell Biology
Inter- and intra-combinatorial regulation by transcription factors and microRNAs
Chapter by: Yiming Zhou; Ferguson, J.; Chang, J.T.; Kluger, Y.
in: Proceedings of the 2007 International Conference on Bioinformatics & Computational Biology. BIOCOMP 2007 by
[S.l.] : CSREA press, 2007
pp. 598-604
ISBN: 160132040x
CID: 5078
CCR7 is functionally required for atherosclerosis regression and is activated by LXR [Meeting Abstract]
Feig, Jonathan E; Randolph, Gwendalyn J; Garabedian, Michael J; Fisher, Edward A
ORIGINAL:0006255
ISSN: 1939-0815
CID: 75322
Using SILAC to Study Cell Signaling in Neurons
Neubert, Thomas A
[S.l.] : NIH, 2007
Extent: Videocast : 1:05:58 ; Air date: Friday, December 07, 2007, 10:00:00 AM
ISBN: n/a
CID: 1432
The asthma dialogues: a model of interactive education for skills
Morrow, Robert; Fletcher, Jason; Mulvihill, Michael; Park, Heidi
INTRODUCTION: A gap exists between asthma guidelines and actual care delivered. We developed an educational intervention using simulated physician-patient encounters as part of a project to improve asthma management by community-based primary care providers. We hypothesized that this type of skills-based interactive training would improve learners' care choices for simulated patients after training compared with their choices before training. METHODS: After a pilot project was done on a small group of providers, a larger group of primary care providers (PCPs) was recruited to be trained with our interactive materials. The pilot session, with 39 providers, showed that the cases were felt to be appropriate, that the time allocated for discussion was adequate, that the models were useful, that the experience was educational, and that the experience captured their interest. Two subsequent training sessions were held with 240 PCPs. Participants completed a questionnaire to elicit perceived barriers and self-efficacy and then viewed a short simulated physician-patient dialogue. They then completed a set of scaled questions about treatment choices. This served as a pretest assessment. A similar simulation was then shown, and the group discussed their thoughts on diagnosis and treatment. Finally, they viewed another physician-patient interaction and responded to the same questions as posed for the pretest assessment; the responses before and after assessment were compared. RESULTS: Following completion of the intervention, providers were significantly (p < 0.05) more likely to make use of controller medications, asthma equipment, and patient training. Significant (p < 0.05) increases were also seen in action plan development and the availability of office visits. Providers were significantly (p < 0.05) less likely to refer asthma patients to an emergency department or for hospitalization. Significant (p < 0.05) improvements were also seen in perceptions of self-efficacy and barriers to treatment. There were significant (p < 0.05) increases in learners' confidence about their own and patients' abilities to improve asthma care, and fewer barriers to asthma management were reported after the training. DISCUSSION: This method of training resulted in learners showing a measurable improvement in their intent to follow guidelines as applied to simulated patients. An evaluation addressing actual patient outcomes will need to be done.
PMID: 17385732
ISSN: 0894-1912
CID: 1595382
Urodynamic characterization of mice lacking uroplakin II or III [Meeting Abstract]
Aboushwareb, Tamer; Zho, Ge; Turner, Chanda; Andersson, Karl-Erik; Tar, Moses; Melman, Arnold; Deng, Fang-Ming; Sun, Tung-Tien; Christ, George J.
ISI:000245708704469
ISSN: 0892-6638
CID: 4448312
Development and role of tight junctions in the retinal pigment epithelium
Rizzolo, Lawrence J
The outer blood-retinal barrier is formed by the retinal pigment epithelium. In any epithelial monolayer, the tight junctions enable the epithelium to form a barrier by joining neighboring cells together and regulating transepithelial diffusion through the paracellular spaces. Tight junctions are complex, dynamic structures that regulate cell proliferation, polarity, and paracellular diffusion. The specific properties of tight junctions vary among epithelia, according to the physiological role of the epithelium. Unlike other epithelia, the apical surface of the retinal pigment epithelium interacts with a solid tissue, the neural retina. Secretions of the developing neural retina regulate the assembly, maturation, and tissue-specific properties of these tight junctions. The slow time course of development allows investigators to dissect the mechanisms of junction assembly and function. These studies are aided by culture systems that model different stages of development.
PMID: 17338922
ISSN: 0074-7696
CID: 382752
Spectroscopic visualization of vortex flows using dye-containing nanofibers
Tsuda, Akihiko; Alam, Md Akhtarul; Harada, Takayuki; Yamaguchi, Tatsuya; Ishii, Noriyuki; Aida, Takuzo
PMID: 17768756
ISSN: 1521-3773
CID: 2982832
A protocol for culturing Drosophila melanogaster stage 9 egg chambers for live imaging
Prasad, Mohit; Jang, Anna C-C; Starz-Gaiano, Michelle; Melani, Mariana; Montell, Denise J
This protocol describes a method for the dissection of egg chambers from intact Drosophila females and culture conditions that permit live imaging of them, with a particular emphasis on stage 9. This stage of development is characterized by oocyte growth and patterning, outer follicle cell rearrangement and migration of border cells. Although in vitro culture of egg chambers of later developmental stages has long been possible, until recently stage 9 egg chambers could only be kept alive for short periods, did not develop normally, and border cell migration failed entirely. We have established culture conditions that support overall egg chamber development including border cell migration in vitro. This protocol makes possible direct observation of molecular and cellular dynamics in both wild-type and mutant egg chambers, and opens the door to testing of pharmacological inhibitors and the use of biosensors. The entire protocol takes approximately 24 h while the preparation of egg chambers for live imaging requires only 15-20 min.
PMID: 17947988
ISSN: 1750-2799
CID: 2141722
The p300/CBP-associated factor (PCAF) is a cofactor of ATF4 for amino acid-regulated transcription of CHOP
Cherasse, Yoan; Maurin, Anne-Catherine; Chaveroux, Cedric; Jousse, Celine; Carraro, Valerie; Parry, Laurent; Deval, Christiane; Chambon, Christophe; Fafournoux, Pierre; Bruhat, Alain
When an essential amino acid is limited, a signaling cascade is triggered that leads to increased translation of the 'master regulator', activating transcription factor 4 (ATF4), and resulting in the induction of specific target genes. Binding of ATF4 to the amino acid response element (AARE) is an essential step in the transcriptional activation of CHOP (a CCAAT/enhancer-binding protein-related gene) by amino acid deprivation. We set out to identify proteins that interact with ATF4 and that play a role in the transcriptional activation of CHOP. Using a tandem affinity purification (TAP) tag approach, we identified p300/CBP-associated factor (PCAF) as a novel interaction partner of ATF4 in leucine-starved cells. We show that the N-terminal region of ATF4 is required for a direct interaction with PCAF and demonstrate that PCAF is involved in the full transcriptional response of CHOP by amino acid starvation. Chromatin immunoprecipitation analysis revealed that PCAF is engaged on the CHOP AARE in response to amino acid starvation and that ATF4 is essential for its recruitment. We also show that PCAF stimulates ATF4-driven transcription via its histone acetyltransferase domain. Thus PCAF acts as a coactivator of ATF4 and is involved in the enhancement of CHOP transcription following amino acid starvation.
PMCID:2034469
PMID: 17726049
ISSN: 1362-4962
CID: 2503722
Morphology, molecular codes, and circuitry produce the three-dimensional complexity of the cerebellum
Sillitoe, Roy V; Joyner, Alexandra L
The most noticeable morphological feature of the cerebellum is its folded appearance, whereby fissures separate its anterior-posterior extent into lobules. Each lobule is molecularly coded along the medial-lateral axis by parasagittal stripes of gene expression in one cell type, the Purkinje cells (PCs). Additionally, within each lobule distinct combinations of afferents terminate and supply the cerebellum with synchronized sensory and motor information. Strikingly, afferent terminal fields are organized into parasagittal domains, and this pattern bears a close relationship to PC molecular coding. Thus, cerebellum three-dimensional complexity obeys a basic coordinate system that can be broken down into morphology and molecular coding. In this review, we summarize the sequential stages of cerebellum development that produce its laminar structure, foliation, and molecular organization. We also introduce genes that regulate morphology and molecular coding, and discuss the establishment of topographical circuits within the context of the two coordinate systems. Finally, we discuss how abnormal cerebellar organization may result in neurological disorders like autism
PMID: 17506688
ISSN: 1081-0706
CID: 96757