Searched for: school:SOM
Department/Unit:Neuroscience Institute
Gravity-dependent signal gradients on MR images of the lung in supine and prone positions: a comparison with isogravitational signal variability
Bankier, Alexander A; Storey, Pippa; Mai, Vu M; Edelman, Robert R; Chen, Qun
PURPOSE: To investigate the tendency of proton MR signal intensity (SI) gradients to be steeper in the supine than in the prone body position, and to quantify the relation between gravity-related and isogravitational changes of SI on proton MR images of the lung. MATERIALS AND METHODS: In eight healthy volunteers, MR images were obtained in the supine and prone positions using a multiple inversion recovery turbo spin-echo (TSE) sequence. The variation in SI along the gravity-dependent direction and within isogravitational planes was measured on a pixel-by-pixel basis. Ratios of slopes were calculated for comparisons among volunteers. Comparisons of ratios were made using Fisher's exact test. Isogravitational variability was compared with the mean SI, the signal-to-noise ratio (SNR), and the image noise. RESULTS: The average ratios of slopes showed that the overall SI gradient was steeper in the supine than the prone position, with a substantial difference in the supine/prone ratios between inspiration (1.21) and expiration (1.72). In both the supine and prone positions, gravity-dependent gradients were steeper in expiration than in inspiration (P = 0.001). The SI variability along the gravitational direction was larger than the isogravitational variability. The isogravitational variability in turn was larger than the image noise but smaller than the mean SI of the MR images. CONCLUSION: Gravity-dependent gradients in proton MR SI are steeper in the supine than in the prone position. The magnitudes of these gradients were larger than the isogravitational signal variability, showing that MRI is sensitive to gravitationally induced effects
PMID: 16400636
ISSN: 1053-1807
CID: 112023
BDNF gene delivery to the entorhinal cortex in models of Alzheimer's disease [Meeting Abstract]
Tuszynski, MH; Nagahara, AH; Merrill, DA; Tsukada, S; Schroeder, BE; Shaked, GM; Blesch, A; Kim, A; Conner, JM; Rockenstein, E; Chao, MV; Chiba, AA; Koo, E; Masliah, E
ISI:000241038300030
ISSN: 0364-5134
CID: 105084
Rab3 superprimes synaptic vesicles for release: implications for short-term synaptic plasticity
Schluter, Oliver M; Basu, Jayeeta; Sudhof, Thomas C; Rosenmund, Christian
Presynaptic vesicle trafficking and priming are important steps in regulating synaptic transmission and plasticity. The four closely related small GTP-binding proteins Rab3A, Rab3B, Rab3C, and Rab3D are believed to be important for these steps. In mice, the complete absence of all Rab3s leads to perinatal lethality accompanied by a 30% reduction of probability of Ca2+-triggered synaptic release. This study examines the role of Rab3 during Ca2+-triggered release in more detail and identifies its impact on short-term plasticity. Using patch-clamp electrophysiology of autaptic neuronal cultures from Rab3-deficient mouse hippocampus, we show that excitatory Rab3-deficient neurons display unique time- and frequency-dependent short-term plasticity characteristics in response to spike trains. Analysis of vesicle release and repriming kinetics as well as Ca2+ sensitivity of release indicate that Rab3 acts on a subset of primed, fusion competent vesicles. They lower the amount of Ca2+ required for action potential-triggered release, which leads to a boosting of release probability, but their action also introduces a significant delay in the supply of these modified vesicles. As a result, Rab3-induced modifications to primed vesicles causes a transient increase in the transduction efficacy of synaptic action potential trains and optimizes the encoding of synaptic information at an intermediate spike frequency range.
PMID: 16436611
ISSN: 0270-6474
CID: 1196022
A neuro-mechanical transducer model for controlling joint rotations and limb movements
Laczko, Jozsef; Kerry, Walton; Rodolfo, Llinas
Here we report on the development of an integrated general model for the control of limb movements. The model computes muscle forces and joint rotations as functions of activation signals from motoneuron pools. It models the relationship between neural signals, muscle forces and movement kinematics by taking into account how the discharge rates of motoneuron pools and the biomechanical characteristics of the musculoskeletal system affect the movement pattern that is produced. The lengths and inertial properties of limb segments, muscle attachment sites, the muscles' force-length, force-frequency and force-velocity (of contraction) relationships, as well as a load parameter that simulates the effect of body weight are considered. There are a large number of possible ways to generate a planned joint rotation with muscle activation. We approach this "overcompleteness problem" by considering each joint to be controlled by a single flexor/extensor muscle pair and that only one of the two muscles is activated at a given time. Using this assumption, we have developed an inverse model that provides discharge rates of motoneuron pools that can produce an intended angular change in each joint. We studied the sensitivity of this inverse model to the muscle force-length relationship and to limb posture. The model could compute possible firing rates of motoneuron pools that would produce joint angle changes observed in rats during walking. It could also compare motoneuron activity patterns received for two different hypothetical force-length relations and show how the motoneuron pool activity would change if joints would be more flexed or extended during the entire movement.
PMID: 16491570
ISSN: 0019-1442
CID: 159228
Expedient synthesis of (+/-)-bipinnatin J
Roethle, Paul A; Trauner, Dirk
[reaction: see text] A nine-step, stereoselective synthesis of bipinnatin J is described, which features a ruthenium-catalyzed Alder-ene reaction, a Stille cross coupling, and an intramolecular Nozaki-Hiyama-Kishi allylation as key steps. The biosynthetic relationship between bipinnatin J and complex polycyclic diterpenes isolated from gorgonian corals is discussed.
PMID: 16408911
ISSN: 1523-7060
CID: 2485542
Frequency-dependent kinetics and prevalence of kiss-and-run and reuse at hippocampal synapses studied with novel quenching methods
Harata, Nobutoshi C; Choi, Sukwoo; Pyle, Jason L; Aravanis, Alexander M; Tsien, Richard W
The kinetics of exo-endocytotic recycling could restrict information transfer at central synapses if neurotransmission were entirely reliant on classical full-collapse fusion. Nonclassical fusion retrieval by kiss-and-run would be kinetically advantageous but remains controversial. We used a hydrophilic quencher, bromophenol blue (BPB), to help detect nonclassical events. Upon stimulation, extracellular BPB entered synaptic vesicles and quenched FM1-43 fluorescence, indicating retention of FM dye beyond first fusion. BPB also quenched fluorescence of VAMP (synaptobrevin-2)-EGFP, thus indicating the timing of first fusion of vesicles in the total recycling pool. Comparison with FM dye destaining revealed that kiss-and-run strongly prevailed over full-collapse fusion at low frequency, giving way to a near-even balance at high frequency. Quickening of kiss-and-run vesicle reuse was also observed at higher frequency in the average single vesicle fluorescence response. Kiss-and-run and reuse could enable hippocampal nerve terminals to conserve scarce vesicular resources when responding to widely varying input patterns
PMID: 16423698
ISSN: 0896-6273
CID: 136740
BRAF mutation predicts sensitivity to MEK inhibition
Solit, David B; Garraway, Levi A; Pratilas, Christine A; Sawai, Ayana; Getz, Gad; Basso, Andrea; Ye, Qing; Lobo, Jose M; She, Yuhong; Osman, Iman; Golub, Todd R; Sebolt-Leopold, Judith; Sellers, William R; Rosen, Neal
The kinase pathway comprising RAS, RAF, mitogen-activated protein kinase kinase (MEK) and extracellular signal regulated kinase (ERK) is activated in most human tumours, often through gain-of-function mutations of RAS and RAF family members. Using small-molecule inhibitors of MEK and an integrated genetic and pharmacologic analysis, we find that mutation of BRAF is associated with enhanced and selective sensitivity to MEK inhibition when compared to either 'wild-type' cells or cells harbouring a RAS mutation. This MEK dependency was observed in BRAF mutant cells regardless of tissue lineage, and correlated with both downregulation of cyclin D1 protein expression and the induction of G1 arrest. Pharmacological MEK inhibition completely abrogated tumour growth in BRAF mutant xenografts, whereas RAS mutant tumours were only partially inhibited. These data suggest an exquisite dependency on MEK activity in BRAF mutant tumours, and offer a rational therapeutic strategy for this genetically defined tumour subtype
PMCID:3306236
PMID: 16273091
ISSN: 1476-4687
CID: 68526
Structural basis by which alternative splicing modulates the organizer activity of FGF8 in the brain
Olsen, Shaun K; Li, James Y H; Bromleigh, Carrie; Eliseenkova, Anna V; Ibrahimi, Omar A; Lao, Zhimin; Zhang, Fuming; Linhardt, Robert J; Joyner, Alexandra L; Mohammadi, Moosa
Two of the four human FGF8 splice isoforms, FGF8a and FGF8b, are expressed in the mid-hindbrain region during development. Although the only difference between these isoforms is the presence of an additional 11 amino acids at the N terminus of FGF8b, these isoforms possess remarkably different abilities to pattern the midbrain and anterior hindbrain. To reveal the structural basis by which alternative splicing modulates the organizing activity of FGF8, we solved the crystal structure of FGF8b in complex with the 'c' splice isoform of FGF receptor 2 (FGFR2c). Using surface plasmon resonance (SPR), we also characterized the receptor-binding specificity of FGF8a and FGF8b, the 'b' isoform of FGF17 (FGF17b), and FGF18. The FGF8b-FGFR2c structure shows that alternative splicing permits a single additional contact between phenylalanine 32 (F32) of FGF8b and a hydrophobic groove within Ig domain 3 of the receptor that is also present in FGFR1c, FGFR3c, and FGFR4. Consistent with the structure, mutation of F32 to alanine reduces the affinity of FGF8b toward all these receptors to levels characteristic of FGF8a. More importantly, analysis of the mid-hindbrain patterning ability of the FGF8b(F32A) mutant in chick embryos and murine midbrain explants shows that this mutation functionally converts FGF8b to FGF8a. Moreover, our data suggest that the intermediate receptor-binding affinities of FGF17b and FGF18, relative to FGF8a and FGF8b, also account for the distinct patterning abilities of these two ligands. We also show that the mode of FGF8 receptor-binding specificity is distinct from that of other FGFs and provide the first biochemical evidence for a physiological FGF8b-FGFR1c interaction during mid-hindbrain development. Consistent with the indispensable role of FGF8 in embryonic development, we show that the FGF8 mode of receptor binding appeared as early as in nematodes and has been preserved throughout evolution
PMCID:1356110
PMID: 16384934
ISSN: 0890-9369
CID: 62746
Identification of a switch in neurotrophin signaling by selective tyrosine phosphorylation
Arevalo, Juan Carlos; Pereira, Daniela B; Yano, Hiroko; Teng, Kenneth K; Chao, Moses V
Neurotrophins, such as nerve growth factor and brain-derived neurotrophic factor, activate Trk receptor tyrosine kinases through receptor dimerization at the cell surface followed by autophosphorylation and recruitment of intracellular signaling molecules. The intracellular pathways used by neurotrophins share many common protein substrates that are used by other receptor tyrosine kinases (RTK), such as Shc, Grb2, FRS2, and phospholipase C-gamma. Here we describe a novel RTK mechanism that involves a 220-kilodalton membrane tetraspanning protein, ARMS/Kidins220, which is rapidly tyrosine phosphorylated in primary neurons after neurotrophin treatment. ARMS/Kidins220 undergoes multiple tyrosine phosphorylation events and also serine phosphorylation by protein kinase D. We have identified a single tyrosine (Tyr(1096)) phosphorylation event in ARMS/Kidins220 that plays a critical role in neurotrophin signaling. A reassembled complex of ARMS/Kidins220 and CrkL, an upstream component of the C3G-Rap1-MAP kinase cascade, is SH3-dependent. However, Tyr(1096) phosphorylation enables ARMS/Kidins220 to recruit CrkL through its SH2 domain, thereby freeing the CrkL SH3 domain to engage C3G for MAP kinase activation in a neurotrophin dependent manner. Accordingly, mutation of Tyr(1096) abolished CrkL interaction and sustained MAPK kinase activity, a response that is not normally observed in other RTKs. Therefore, Trk receptor signaling involves an inducible switch mechanism through an unconventional substrate that distinguishes neurotrophin action from other growth factor receptors
PMID: 16284401
ISSN: 0021-9258
CID: 62638
Neuromuscular synapse formation in mice lacking motor neuron- and skeletal muscle-derived Neuregulin-1
Jaworski, Alexander; Burden, Steven J
The localization of acetylcholine receptors (AChRs) to the vertebrate neuromuscular junction is mediated, in part, through selective transcription of AChR subunit genes in myofiber subsynaptic nuclei. Agrin and the muscle-specific receptor tyrosine kinase, MuSK, have critical roles in synapse-specific transcription, because AChR genes are expressed uniformly in mice lacking either agrin or MuSK. Several lines of evidence suggest that agrin and MuSK stimulate synapse-specific transcription indirectly by regulating the distribution of other cell surface ligands, which stimulate a pathway for synapse-specific gene expression. This putative secondary signal for directing AChR gene expression to synapses is not known, but Neuregulin-1 (Nrg-1), primarily based on its presence at synapses and its ability to induce AChR gene expression in vitro, has been considered a good candidate. To study the role of Nrg-1 at neuromuscular synapses, we inactivated nrg-1 in motor neurons, skeletal muscle, or both cell types, using mice that express Cre recombinase selectively in developing motor neurons or in developing skeletal myofibers. We find that AChRs are clustered at synapses and that synapse-specific transcription is normal in mice lacking Nrg-1 in motor neurons, myofibers, or both cell types. These data indicate that Nrg-1 is dispensable for clustering AChRs and activating AChR genes in subsynaptic nuclei during development and suggest that these aspects of postsynaptic differentiation are dependent on Agrin/MuSK signaling without a requirement for a secondary signal
PMID: 16407563
ISSN: 1529-2401
CID: 72661