Searched for: school:SOM
Department/Unit:Population Health
Engaging in Clinical Research and Practice Approaches that Reduce Environmental Impact
Loeb, Stacy
Telemedicine, virtual conferences, and reducing waste in the operating room are ways in which urologists can reduce their environmental impact in daily practice. Patient counseling should also consider advice that simultaneously promotes overall, urological, and planetary health, such as plant-based diets and active transport.
PMID: 38688768
ISSN: 2588-9311
CID: 5734172
The Effect of an Obesity Prevention Intervention Among Specific Subpopulations: A Heterogeneity of Treatment Effect Analysis of the Greenlight Trial
Heerman, William J; Yin, H Shonna; Schildcrout, Jonathan S; Bian, Aihua; Rothman, Russell L; Flower, Kori B; Delamater, Alan M; Sanders, Lee; Wood, Charles; Perrin, Eliana M
PMID: 38722268
ISSN: 2153-2176
CID: 5733982
Evaluating Large Language Models in extracting cognitive exam dates and scores
Zhang, Hao; Jethani, Neil; Jones, Simon; Genes, Nicholas; Major, Vincent J; Jaffe, Ian S; Cardillo, Anthony B; Heilenbach, Noah; Ali, Nadia Fazal; Bonanni, Luke J; Clayburn, Andrew J; Khera, Zain; Sadler, Erica C; Prasad, Jaideep; Schlacter, Jamie; Liu, Kevin; Silva, Benjamin; Montgomery, Sophie; Kim, Eric J; Lester, Jacob; Hill, Theodore M; Avoricani, Alba; Chervonski, Ethan; Davydov, James; Small, William; Chakravartty, Eesha; Grover, Himanshu; Dodson, John A; Brody, Abraham A; Aphinyanaphongs, Yindalon; Masurkar, Arjun; Razavian, Narges
Ensuring reliability of Large Language Models (LLMs) in clinical tasks is crucial. Our study assesses two state-of-the-art LLMs (ChatGPT and LlaMA-2) for extracting clinical information, focusing on cognitive tests like MMSE and CDR. Our data consisted of 135,307 clinical notes (Jan 12th, 2010 to May 24th, 2023) mentioning MMSE, CDR, or MoCA. After applying inclusion criteria 34,465 notes remained, of which 765 underwent ChatGPT (GPT-4) and LlaMA-2, and 22 experts reviewed the responses. ChatGPT successfully extracted MMSE and CDR instances with dates from 742 notes. We used 20 notes for fine-tuning and training the reviewers. The remaining 722 were assigned to reviewers, with 309 each assigned to two reviewers simultaneously. Inter-rater-agreement (Fleiss' Kappa), precision, recall, true/false negative rates, and accuracy were calculated. Our study follows TRIPOD reporting guidelines for model validation. For MMSE information extraction, ChatGPT (vs. LlaMA-2) achieved accuracy of 83% (vs. 66.4%), sensitivity of 89.7% (vs. 69.9%), true-negative rates of 96% (vs 60.0%), and precision of 82.7% (vs 62.2%). For CDR the results were lower overall, with accuracy of 87.1% (vs. 74.5%), sensitivity of 84.3% (vs. 39.7%), true-negative rates of 99.8% (98.4%), and precision of 48.3% (vs. 16.1%). We qualitatively evaluated the MMSE errors of ChatGPT and LlaMA-2 on double-reviewed notes. LlaMA-2 errors included 27 cases of total hallucination, 19 cases of reporting other scores instead of MMSE, 25 missed scores, and 23 cases of reporting only the wrong date. In comparison, ChatGPT's errors included only 3 cases of total hallucination, 17 cases of wrong test reported instead of MMSE, and 19 cases of reporting a wrong date. In this diagnostic/prognostic study of ChatGPT and LlaMA-2 for extracting cognitive exam dates and scores from clinical notes, ChatGPT exhibited high accuracy, with better performance compared to LlaMA-2. The use of LLMs could benefit dementia research and clinical care, by identifying eligible patients for treatments initialization or clinical trial enrollments. Rigorous evaluation of LLMs is crucial to understanding their capabilities and limitations.
PMCID:11634005
PMID: 39661652
ISSN: 2767-3170
CID: 5762692
Artificial intelligence, ethics, and hospital medicine: Addressing challenges to ethical norms and patient-centered care
Prochaska, Micah; Alfandre, David
PMID: 38650109
ISSN: 1553-5606
CID: 5738482
Dementia risk reduction in the African context: Multi-national implementation of multimodal strategies to promote healthy brain aging in Africa (the Africa-FINGERS project)
Udeh-Momoh, Chinedu T; Maina, Rachel; Anazodo, Udunna C; Akinyemi, Rufus; Atwoli, Lukoye; Baker, Laura; Bassil, Darina; Blackmon, Karen; Bosire, Edna; Chemutai, Gloria; Crivelli, Lucia; Eze, Laz U; Ibanez, Agustin; Kafetsouli, Dimitra; Karikari, Thomas K; Khakali, Linda; Kumar, Manasi; Lengyel, Imre; de Jager Loots, Celeste A; Mangialasche, Francesca; Mbugua, Sylvia; Merali, Zul; Mielke, Michelle; Mostert, Cyprian; Muthoni, Eunice; Nesic-Taylor, Olivera; Ngugi, Anthony; Nguku, Samuel; Ogunniyi, Adesola; Ogunyemi, Adedoyin; Okonkwo, Ozioma C; Okubadejo, Njideka; Perneczky, Robert; Peto, Tunde; Riang'a, Roselyter M; Saleh, Mansoor; Sayed, Shaheen; Shah, Jasmit; Shah, Sheena; Solomon, Alina; Thesen, Thomas; Trepel, Dominic; Ucheagwu, Valentine; Valcour, Victor; Waa, Sheila; Watermeyer, Tamlyn; Yokoyama, Jennifer; Zetterberg, Henrik; Kivipelto, Miia; ,
Dementia prevention in Africa is critically underexplored, despite the continent's high prevalence of modifiable risk factors. With a predominantly young and middle-aged population, Africa presents a prime opportunity to implement evidence-based strategies that could significantly reduce future dementia cases and mitigate its economic impact. The multinational Africa-FINGERS program offers an innovative solution, pioneering culturally sensitive, multidomain interventions tailored to the unique challenges of the region. Leveraging insights from landmark global studies such as Worldwide-FINGERS and Alzheimer's Disease Neuroimaging Initiative, the program employs a multideterminant precision prevention framework, grounded in community based systems dynamics. Africa-FINGERS further integrates cutting-edge state-of-the-art multimodal biomarker evaluations tailored to regional contexts, with the goal of advancing brain health and establishing a global standard for dementia prevention. This groundbreaking initiative highlights the potential for scalableand sustainable interventions, thus is poised to transform dementia risk reduction efforts across the continent. HIGHLIGHTS: Dementia rates are escalating in Africa, largely due to longer life spans and increased prevalence of modifiable risk factors. Yet, few regional interventions have directly targeted lifestyle factors to reduce dementia risk. The multinational Africa-FINGERS study will address this gap by adapting the successful FINGERS lifestyle intervention to African populations. Africa-FINGERS will pioneer a culturally informed, multidomain dementia risk reduction intervention in the African region through feasibility dementia prevention trials in rural and urban sites across Kenya and Nigeria in the first instance, enrolling 600 at-risk adults (≥ 50 years). The program adopts participatory research methods to develop culturally appropriate interventions and build infrastructure to evaluate dementia biomarkers from ante and post mortem samples. A cost-effectiveness analysis will be conducted to guide the strategic implementation of Africa-FINGERS into regional health systems. The Africa-FINGERS strategy aligns with the Worldwide-FINGERS framework and integrates the global Alzheimer's Disease Neuroimaging Initiative approach, emphasizing multimodal analysis.
PMID: 39511921
ISSN: 1552-5279
CID: 5752142
Staging schema for early diagnosis of prediabetes
Bergman, Michael; Abdul-Ghani, Muhammad; Chan, Juliana; Schmidt, Maria Inês; Ha, Joon; Kim, Sang Soo; Sherman, Arthur S; Jagannathan, Ram; Tuomilehto, Jaakko
PMID: 39522533
ISSN: 2213-8595
CID: 5752412
Prenatal Stress and Maternal Role in Neurodevelopment
Thomason, Moriah E; Hendrix, Cassandra L
This review summarizes recent findings on stress-related programming of brain development in utero, with an emphasis on situating findings within the mothers' broader psychosocial experiences. Meta-analyses of observational studies on prenatal stress exposure indicate the direction and size of effects on child neurodevelopment are heterogeneous across studies. Inspired by lifespan and topological frameworks of adversity, we conceptualize individual variation in mothers' lived experience during and prior to pregnancy as a key determinant of these heterogeneous effects across populations. We structure our review to discuss experiential categories that may uniquely shape the psychological and biological influence of stress on pregnant mothers and their developing children, including current socioeconomic resources, exposure to chronic and traumatic stressors, culture and historical trauma, and the contours of prenatal stress itself. We conclude by identifying next steps that hold potential to meaningfully advance the field of fetal programming.
PMCID:11694802
PMID: 39759868
ISSN: 2640-7922
CID: 5770732
Biospecimens in the HEALthy Brain and Child Development (HBCD) Study: Rationale and protocol
Sullivan, Elinor L; Bogdan, Ryan; Bakhireva, Ludmila; Levitt, Pat; Jones, Joseph; Sheldon, Michael; Croff, Julie M; Thomason, Moriah; Lo, Jamie O; MacIntyre, Leigh; Shrivastava, Susmita; Cioffredi, Leigh-Anne; Edlow, Andrea G; Howell, Brittany R; Chaiyachati, Barbara H; Lashley-Simms, Nicole; Molloy, Kelly; Lam, Cris; Stoermann, Anna M; Trinh, Thanh; Ambalavanan, Namasivayam; Neiderhiser, Jenae M; ,
The HEALthy Brain and Child Development (HBCD) Study, a multi-site prospective longitudinal cohort study, will examine human brain, cognitive, behavioral, social, and emotional development beginning prenatally and planned through early childhood. The longitudinal collection of biological samples from over 7000 birthing parents and their children within the HBCD study enables research on pre- and postnatal exposures (e.g., substance use, toxicants, nutrition), and biological processes (e.g., genetics, epigenetic signatures, proteins, metabolites) on neurobehavioral developmental outcomes. The following biosamples are collected from the birthing parent: 1) blood (i.e., whole blood, serum, plasma, buffy coat, and dried blood spots) during pregnancy, 2) nail clippings during pregnancy and one month postpartum, 3) urine during pregnancy, and 4) saliva during pregnancy and at in-person postnatal assessments. The following samples are collected from the child at in-person study assessments: 1) saliva, 2) stool, and 3) urine. Additionally, placenta tissue, cord blood, and cord tissue are collected by a subset of HBCD sites. Here, we describe the rationale for the collection of these biospecimens, their current and potential future uses, the collection protocol, and collection success rates during piloting. This information will assist research teams in the planning of future studies utilizing this collection of biological samples.
PMCID:11460495
PMID: 39326174
ISSN: 1878-9307
CID: 5763312
Clinical Policy: Use of Thrombolytics for the Management of Acute Ischemic Stroke in the Emergency Department
,; Lo, Bruce M; Carpenter, Christopher R; Milne, Ken; Panagos, Peter; Haukoos, Jason S; Diercks, Deborah B; ,; Diercks, Deborah B; Anderson, John D; Byyny, Richard; Carpenter, Christopher R; Friedman, Benjamin W; Gemme, Seth R; Gerardo, Charles J; Godwin, Steven A; Hatten, Benjamin W; Haukoos, Jason S; Kaji, Amy; Kwok, Heemun; Lo, Bruce M; Mace, Sharon E; Mattu, Amal; Promes, Susan B; Shah, Kaushal H; Shih, Richard D; Silvers, Scott M; Slivinski, Andrea; Smith, Michael D; Thiessen, Molly E W; Thompson, John T; Tomaszewski, Christian A; Trent, Stacy A; Valente, Jonathan H; Westafer, Lauren M; Wall, Stephen P; Yu, Yanling; Lin, Michelle P; Finnell, John T; Schulz, Travis; Vandertulip, Kaeli
PMID: 39578010
ISSN: 1097-6760
CID: 5953192
Readability Assessment of Patient Education Materials on Uro-oncological Diseases Using Automated Measures
Rodler, Severin; Maruccia, Serena; Abreu, Andre; Murphy, Declan; Canes, David; Loeb, Stacy; Malik, Rena D; Bagrodia, Aditya; Cacciamani, Giovanni E
BACKGROUND AND OBJECTIVE/OBJECTIVE:Readability of patient education materials is of utmost importance to ensure understandability and dissemination of health care information in uro-oncology. We aimed to investigate the readability of the official patient education materials of the European Association of Urology (EAU) and American Urology Association (AUA). METHODS:Patient education materials for prostate, bladder, kidney, testicular, penile, and urethral cancers were retrieved from the respective organizations. Readability was assessed via the WebFX online tool for Flesch Kincaid Reading Ease Score (FRES) and for reading grade levels by Flesch Kincaid Grade Level (FKGL), Gunning Fog Score (GFS), Smog Index (SI), Coleman Liau Index (CLI), and Automated Readability Index (ARI). Layperson readability was defined as a FRES of ≥70 and with the other readability indexes <7 according to European Union recommendations. This study assessed only objective readability and no other metrics such as understandability. KEY FINDINGS AND LIMITATIONS/UNASSIGNED:Most patient education materials failed to meet the recommended threshold for laypersons. The mean readability for EAU patient education material was as follows: FRES 50.9 (standard error [SE]: 3.0), and FKGL, GFS, SI, CLI, and ARI all with scores ≥7. The mean readability for AUA patient material was as follows: FRES 64.0 (SE: 1.4), with all of FKGL, GFS, SI, and ARI scoring ≥7 readability. Only 13 out of 70 (18.6%) patient education materials' paragraphs met the readability requirements. The mean readability for bladder cancer patient education materials was the lowest, with a FRES of 36.7 (SE: 4.1). CONCLUSIONS AND CLINICAL IMPLICATIONS/CONCLUSIONS:Patient education materials from leading urological associations reveal readability levels beyond the recommended thresholds for laypersons and may not be understood easily by patients. There is a future need for more patient-friendly reading materials. PATIENT SUMMARY/RESULTS:This study checked whether health information about different cancers was easy to read. Most of it was too hard for patients to understand.
PMID: 39048402
ISSN: 2405-4569
CID: 5738652