Searched for: school:SOM
Department/Unit:Neuroscience Institute
Mice expressing fluorescent PAR(2) reveal that endocytosis mediates colonic inflammation and pain
Latorre, Rocco; Hegron, Alan; Peach, Chloe J.; Teng, Shavonne; Tonello, Raquel; Retamal, Jeffri S.; Klein-Cloud, Rafael; Bok, Diana; Jensen, Dane D.; Gottesman-Katz, Lena; Rientjes, Jeanette; Veldhuis, Nicholas A.; Poole, Daniel P.; Schmidt, Brian L.; Pothoulakis, Charalabos H.; Rankin, Carl; Xie, Ying; Koon, Hon Wai; Bunnett, Nigel W.
ISI:000758482900007
ISSN: 0027-8424
CID: 5207592
Are Grid-Like Representations a Component of All Perception and Cognition?
Chen, Zhe Sage; Zhang, Xiaohan; Long, Xiaoyang; Zhang, Sheng-Jia
Grid cells or grid-like responses have been reported in the rodent, bat and human brains during various spatial and non-spatial tasks. However, the functions of grid-like representations beyond the classical hippocampal formation remain elusive. Based on accumulating evidence from recent rodent recordings and human fMRI data, we make speculative accounts regarding the mechanisms and functional significance of the sensory cortical grid cells and further make theory-driven predictions. We argue and reason the rationale why grid responses may be universal in the brain for a wide range of perceptual and cognitive tasks that involve locomotion and mental navigation. Computational modeling may provide an alternative and complementary means to investigate the grid code or grid-like map. We hope that the new discussion will lead to experimentally testable hypotheses and drive future experimental data collection.
PMCID:9329517
PMID: 35911570
ISSN: 1662-5110
CID: 5287642
World Trade Center (WTC) Exposure Community Survivors with Uncontrolled Lower Respiratory Symptoms: Molecular Clustering Analysis [Meeting Abstract]
Grunig, G.; Durmus, N.; Zhang, Y.; Pehlivan, S.; Wang, Y.; Doo, K.; Berger, K. I.; Liu, M.; Shao, Y.; Reibman, J.
ISI:000792480405270
ISSN: 1073-449x
CID: 5237662
Big insight from the little skate: Leucoraja erinacea as a developmental model system
Gillis, J Andrew; Bennett, Scott; Criswell, Katharine E; Rees, Jenaid; Sleight, Victoria A; Hirschberger, Christine; Calzarette, Dan; Kerr, Sarah; Dasen, Jeremy
The vast majority of extant vertebrate diversity lies within the bony and cartilaginous fish lineages of jawed vertebrates. There is a long history of elegant experimental investigation of development in bony vertebrate model systems (e.g., mouse, chick, frog and zebrafish). However, studies on the development of cartilaginous fishes (sharks, skates and rays) have, until recently, been largely descriptive, owing to the challenges of embryonic manipulation and culture in this group. This, in turn, has hindered understanding of the evolution of developmental mechanisms within cartilaginous fishes and, more broadly, within jawed vertebrates. The little skate (Leucoraja erinacea) is an oviparous cartilaginous fish and has emerged as a powerful and experimentally tractable developmental model system. Here, we discuss the collection, husbandry and management of little skate brood stock and eggs, and we present an overview of key stages of skate embryonic development. We also discuss methods for the manipulation and culture of skate embryos and illustrate the range of tools and approaches available for studying this system. Finally, we summarize a selection of recent studies on skate development that highlight the utility of this system for inferring ancestral anatomical and developmental conditions for jawed vertebrates, as well as unique aspects of cartilaginous fish biology.
PMID: 35337464
ISSN: 1557-8933
CID: 5190652
Proteomic Alterations and Novel Markers of Neurotoxic Reactive Astrocytes in Human Induced Pluripotent Stem Cell Models
Labib, David; Wang, Zhen; Prakash, Priya; Zimmer, Matthew; Smith, Matthew D; Frazel, Paul W; Barbar, Lilianne; Sapar, Maria L; Calabresi, Peter A; Peng, Junmin; Liddelow, Shane A; Fossati, Valentina
Astrocytes respond to injury, infection, and inflammation in the central nervous system by acquiring reactive states in which they may become dysfunctional and contribute to disease pathology. A sub-state of reactive astrocytes induced by proinflammatory factors TNF, IL-1α, and C1q ("TIC") has been implicated in many neurodegenerative diseases as a source of neurotoxicity. Here, we used an established human induced pluripotent stem cell (hiPSC) model to investigate the surface marker profile and proteome of TIC-induced reactive astrocytes. We propose VCAM1, BST2, ICOSL, HLA-E, PD-L1, and PDPN as putative, novel markers of this reactive sub-state. We found that several of these markers colocalize with GFAP+ cells in post-mortem samples from people with Alzheimer's disease. Moreover, our whole-cells proteomic analysis of TIC-induced reactive astrocytes identified proteins and related pathways primarily linked to potential engagement with peripheral immune cells. Taken together, our findings will serve as new tools to purify reactive astrocyte subtypes and to further explore their involvement in immune responses associated with injury and disease.
PMCID:9113221
PMID: 35592112
ISSN: 1662-5099
CID: 5284332
Neither Threat of Shock nor Acute Psychosocial Stress Affects Ambiguity Attitudes
Sambrano, Deshawn Chatman; Lormestoire, Arlene; Raio, Candace; Glimcher, Paul; Phelps, Elizabeth A
Decisions under uncertainty can be differentiated into two classes: risky, which has known probabilistic outcomes, and ambiguous, which has unknown probabilistic outcomes. Across a variety of types of decisions, people find ambiguity extremely aversive, subjectively more aversive than risk. It has been shown that the transient sympathetic arousal response to a choice predicts decisions under ambiguity but not risk, and that lifetime stress uniquely predicts attitudes toward ambiguity. Building on these findings, this study explored whether we could bias ambiguity and risk preferences with an arousal or acute stress manipulation that is incidental to the choice in two independent experiments. One experiment induced sympathetic arousal with an anticipatory threat paradigm, and the other manipulated incidental acute stress via a psychosocial stressor. The efficacy of the manipulations was confirmed via pupil dilation and salivary cortisol, respectively. Participants made choices between a guaranteed $5 option and a lottery with either a known (risky) or unknown (ambiguous) probabilistic outcome. Consistent with previous findings, participants were more averse to a given level of ambiguity than to a numerically equal level of risk. However, in contrast to our hypothesis, we found no evidence that transient arousal or acute stress that is incidental to the choice biases ambiguity preferences.
PMCID:9249716
PMID: 35791419
ISSN: 2662-205x
CID: 5280332
Visualization and Analysis of Multidimensional Cardiovascular Magnetic Resonance Imaging: Challenges and Opportunities
Axel, Leon; Phan, Timothy S; Metaxas, Dimitris N
Recent advances in magnetic resonance imaging are enabling the efficient creation of high-dimensional, multiparametric images, containing a wealth of potential information about the structure and function of many organs, including the cardiovascular system. However, the sizes of these rich data sets are so large that they are outstripping our ability to adequately visualize and analyze them, thus limiting their clinical impact. While there are some intrinsic limitations of human perception and of conventional display devices which hamper our ability to effectively use these data, newer computational methods for handling the data may aid our ability to extract and visualize the salient components of these high-dimensional data sets.
PMCID:9289269
PMID: 35859582
ISSN: 2297-055x
CID: 5279222
Establishing the Molecular and Functional Diversity of Spinal Motoneurons
Dasen, Jeremy S
Spinal motoneurons are a remarkably diverse class of neurons responsible for facilitating a broad range of motor behaviors and autonomic functions. Studies of motoneuron differentiation have provided fundamental insights into the developmental mechanisms of neuronal diversification, and have illuminated principles of neural fate specification that operate throughout the central nervous system. Because of their relative anatomical simplicity and accessibility, motoneurons have provided a tractable model system to address multiple facets of neural development, including early patterning, neuronal migration, axon guidance, and synaptic specificity. Beyond their roles in providing direct communication between central circuits and muscle, recent studies have revealed that motoneuron subtype-specific programs also play important roles in determining the central connectivity and function of motor circuits. Cross-species comparative analyses have provided novel insights into how evolutionary changes in subtype specification programs may have contributed to adaptive changes in locomotor behaviors. This chapter focusses on the gene regulatory networks governing spinal motoneuron specification, and how studies of spinal motoneurons have informed our understanding of the basic mechanisms of neuronal specification and spinal circuit assembly.
PMID: 36066819
ISSN: 2190-5215
CID: 5332402
A Proposed Brain-, Spine-, and Mental- Health Screening Methodology (NEUROSCREEN) for Healthcare Systems: Position of the Society for Brain Mapping and Therapeutics
Nami, Mohammad; Thatcher, Robert; Kashou, Nasser; Lopes, Dahabada; Lobo, Maria; Bolanos, Joe F; Morris, Kevin; Sadri, Melody; Bustos, Teshia; Sanchez, Gilberto E; Mohd-Yusof, Alena; Fiallos, John; Dye, Justin; Guo, Xiaofan; Peatfield, Nicholas; Asiryan, Milena; Mayuku-Dore, Alero; Krakauskaite, Solventa; Soler, Ernesto Palmero; Cramer, Steven C; Besio, Walter G; Berenyi, Antal; Tripathi, Manjari; Hagedorn, David; Ingemanson, Morgan; Gombosev, Marinela; Liker, Mark; Salimpour, Yousef; Mortazavi, Martin; Braverman, Eric; Prichep, Leslie S; Chopra, Deepak; Eliashiv, Dawn S; Hariri, Robert; Tiwari, Ambooj; Green, Ken; Cormier, Jason; Hussain, Namath; Tarhan, Nevzat; Sipple, Daniel; Roy, Michael; Yu, John S; Filler, Aaron; Chen, Mike; Wheeler, Chris; Ashford, J Wesson; Blum, Kenneth; Zelinsky, Deborah; Yamamoto, Vicky; Kateb, Babak
The COVID-19 pandemic has accelerated neurological, mental health disorders, and neurocognitive issues. However, there is a lack of inexpensive and efficient brain evaluation and screening systems. As a result, a considerable fraction of patients with neurocognitive or psychobehavioral predicaments either do not get timely diagnosed or fail to receive personalized treatment plans. This is especially true in the elderly populations, wherein only 16% of seniors say they receive regular cognitive evaluations. Therefore, there is a great need for development of an optimized clinical brain screening workflow methodology like what is already in existence for prostate and breast exams. Such a methodology should be designed to facilitate objective early detection and cost-effective treatment of such disorders. In this paper we have reviewed the existing clinical protocols, recent technological advances and suggested reliable clinical workflows for brain screening. Such protocols range from questionnaires and smartphone apps to multi-modality brain mapping and advanced imaging where applicable. To that end, the Society for Brain Mapping and Therapeutics (SBMT) proposes the Brain, Spine and Mental Health Screening (NEUROSCREEN) as a multi-faceted approach. Beside other assessment tools, NEUROSCREEN employs smartphone guided cognitive assessments and quantitative electroencephalography (qEEG) as well as potential genetic testing for cognitive decline risk as inexpensive and effective screening tools to facilitate objective diagnosis, monitor disease progression, and guide personalized treatment interventions. Operationalizing NEUROSCREEN is expected to result in reduced healthcare costs and improving quality of life at national and later, global scales.
PMID: 35034899
ISSN: 1875-8908
CID: 5131282
Splitting of the magnetic encephalogram into «brain» and «non-brain» physiological signals based on the joint analysis of frequency-pattern functional tomograms and magnetic resonance images
Llinás, Rodolfo R; Rykunov, Stanislav; Walton, Kerry D; Boyko, Anna; Ustinin, Mikhail
The article considers the problem of dividing the encephalography data into two time series, that generated by the brain and that generated by other electrical sources located in the human head. The magnetic encephalograms and magnetic resonance images of the head were recorded in the Center for Neuromagnetism at NYU Grossman School of Medicine. Data obtained at McGill University and Montreal University were also used. Recordings were made in a magnetically shielded room and the gradiometers were designed to suppress external noise, making it possible to eliminate them from the data analysis. Magnetic encephalograms were analyzed by the method of functional tomography, based on the Fourier transform and on the solution of inverse problem for all frequencies. In this method, one spatial position is assigned to each frequency component. Magnetic resonance images of the head were evaluated to annotate the space to be included in the analysis. The included space was divided into two parts: «brain» and «non-brain». The frequency components were classified by the feature of their inclusion in one or the other part. The set of frequencies, designated as «brain», represented the partial spectrum of the brain signal, while the set of frequencies designated as «non-brain», represented the partial spectrum of the physiological noise produced by the head. Both partial spectra shared the same frequency band. From the partial spectra, a time series of the «brain» area signal and «non-brain» area head noise were reconstructed. Summary spectral power of the signal was found to be ten times greater than the noise. The proposed method makes it possible to analyze in detail both the signal and the noise components of the encephalogram and to filter the magnetic encephalogram.
PMCID:9458866
PMID: 36092277
ISSN: 1662-5110
CID: 5332712