Searched for: Department/Unit:Neuroscience Institute
Preparation of Postmortem Human Formalin-Fixed Paraffin-Embedded Frontal Cortex Tissue for Profiling Pyramidal Neurons Via Digital Spatial Profiling
Stanisavljevic, Aleksandra; Ginsberg, Stephen D
Digital spatial profiling (DSP) facilitates RNA sequencing (RNA-seq) of small populations of cells, specifically ~20 pyramidal neurons in postmortem formalin-fixed paraffin-embedded (FFPE) human brain tissue. This approach enables precise expression profiling via RNA-seq data linked to spatially characterized samples utilizing tissue-bound probes. We present a comprehensive protocol for manual slide preparation using the GeoMx DSP system as preliminary steps to spatial characterization of lamina-specific pyramidal neurons in human postmortem Brodmann area 9 (BA9) frontal cortex brain tissue.
PMID: 42734759
ISSN: 1940-6029
CID: 6072871
Cardiovascular magnetic resonance derived myocardial strain: applications, acquisition techniques, analysis, and reporting. A Scientific Statement of the Society for Cardiovascular Magnetic Resonance, Radiological Society of North America, and the European Association of Cardiovascular Imaging of the ESC
Gulsin, Gaurav S; Ambale-Venkatesh, Bharath; Axel, Leon; Bluemke, David A; Captur, Gabriella; Cavalcante, João L; Ennis, Daniel B; Epstein, Frederick H; Gerber, Bernhard; Hanneman, Kate; Kawel-Boehm, Nadine; Kelle, Sebastian; Kramer, Christopher M; Lima, Joao A C; Lamb, Hildo J; Lu, Minjie; Marwick, Thomas H; Romano, Simone; Young, Alistair A; McCann, Gerry P
Myocardial strain imaging enables quantification of cardiac deformation. Cardiovascular magnetic resonance imaging (CMR) is well suited for strain assessment due to the ability to image in any given plane with high spatial and contrast resolution. CMR strain measures have incremental diagnostic and prognostic utility over conventional clinical imaging parameters across disease states. Routine integration of CMR strain assessment in clinical practice has been hindered by the lack of agreement on imaging protocols and analysis methods, variability due to noise sensitivity, and a paucity of robust normative age-, sex- and ethnicity-specific reference ranges. In recognition of the expanding applications of strain techniques in clinical and research CMR, this joint SCMR/RSNA/EACVI scientific statement integrates data from original research studies, guidelines, and opinions from experts across the field to guide responsible and evidence-based utilization of CMR strain.
PMID: 42855356
ISSN: 1532-429x
CID: 6074075
Cardiovascular magnetic resonance derived myocardial strain: applications, acquisition techniques, analysis, and reporting. A Scientific Statement of the Society for Cardiovascular Magnetic Resonance, Radiological Society of North America, and the European Association of Cardiovascular Imaging of the ESC
Gulsin, Gaurav S; Ambale-Venkatesh, Bharath; Axel, Leon; Bluemke, David A; Captur, Gabriella; Cavalcante, João L; Ennis, Daniel B; Epstein, Frederick H; Gerber, Bernhard; Hanneman, Kate; Kawel-Boehm, Nadine; Kelle, Sebastian; Kramer, Christopher M; Lima, Joao A C; Lamb, Hildo J; Lu, Minjie; Marwick, Thomas H; Romano, Simone; Young, Alistair A; McCann, Gerry P
Myocardial strain imaging enables quantification of cardiac deformation. Cardiovascular magnetic resonance imaging (CMR) is well suited for strain assessment due to the ability to image in any given plane with high spatial and contrast resolution. CMR strain measures have incremental diagnostic and prognostic utility over conventional clinical imaging parameters across disease states. Routine integration of CMR strain assessment in clinical practice has been hindered by the lack of agreement on imaging protocols and analysis methods, variability due to noise sensitivity, and a paucity of robust normative age-, sex- and ethnicity-specific reference ranges. In recognition of the expanding applications of strain techniques in clinical and research CMR, this joint SCMR/RSNA/EACVI scientific statement integrates data from original research studies, guidelines, and opinions from experts across the field to guide responsible and evidence-based utilization of CMR strain.
PMID: 42855356
ISSN: 1532-429x
CID: 6074074
Cardiovascular magnetic resonance derived myocardial strain: applications, acquisition techniques, analysis, and reporting
Gulsin, Gaurav S; Ambale-Venkatesh, Bharath; Axel, Leon; Bluemke, David A; Captur, Gabriella; Cavalcante, João L; Ennis, Daniel B; Epstein, Frederick H; Gerber, Bernhard; Hanneman, Kate; Kawel-Boehm, Nadine; Kelle, Sebastian; Kramer, Christopher M; Lima, Joao A C; Lamb, Hildo J; Lu, Minjie; Marwick, Thomas H; Romano, Simone; Young, Alistair A; McCann, Gerry P
Myocardial strain imaging enables quantification of cardiac deformation. Cardiovascular magnetic resonance imaging (CMR) is well suited for strain assessment due to the ability to image in any given plane with high spatial and contrast resolution. CMR strain measures have incremental diagnostic and prognostic utility over conventional clinical imaging parameters across disease states. Routine integration of CMR strain assessment in clinical practice has been hindered by the lack of agreement on imaging protocols and analysis methods, variability due to noise sensitivity, and a paucity of robust normative age-, sex- and ethnicity-specific reference ranges. In recognition of the expanding applications of strain techniques in clinical and research CMR, this joint SCMR/RSNA/EACVI scientific statement integrates data from original research studies, guidelines, and opinions from experts across the field to guide responsible and evidence-based utilization of CMR strain.
PMID: 42851042
ISSN: 2047-2412
CID: 6074040
A split attractor design for rapidly writing a navigational goal
Lanz, Aaron J; Kathman, Nicholas D; Hao, Emily; Ermentrout, Bard; Nagel, Katherine I
Recurrent attractor networks are widely thought to form the basis of working memory1-3, but how they can be rapidly switched on and off is unclear4-7. Here we investigate stability and switching in a recurrent circuit of the fly navigation centre8. h∆K and PFG neurons are recurrently connected in a ring structure and exhibit shared persistent bump activity that turns on with odour and terminates at the end of a goal-directed run. Using whole-cell recordings, we show that persistence in h∆K depends on recurrence, and that h∆K receives slow recurrent excitation and fast inhibition from its synaptic partners. Computational modelling reveals that these synaptic dynamics yield persistent attractor dynamics over a range of synaptic strengths. Next we examine the mechanisms of rapid switching. We find that whereas both populations show similar activity during runs, they become decoupled during turns and rest. We can reproduce these differential dynamics in our model by using inhibition to dynamically uncouple activity in h∆K from PFG. When h∆K is inhibited, PFG neurons follow their inputs from the compass system; when h∆K is disinhibited, recurrent interactions lock this input into place, forming a heading memory. Consistent with this model, we find that inhibitory inputs onto h∆K increase during turns and are suppressed during odour and goal-directed runs. Our work reveals how disinhibition can serve as a gate to rapidly write an ongoing measurement to a recurrent circuit.
PMID: 42844464
ISSN: 1476-4687
CID: 6073992
Cardiovascular magnetic resonance derived myocardial strain: applications, acquisition techniques, analysis, and reporting
Gulsin, Gaurav S; Ambale-Venkatesh, Bharath; Axel, Leon; Bluemke, David A; Captur, Gabriella; Cavalcante, João L; Ennis, Daniel B; Epstein, Frederick H; Gerber, Bernhard; Hanneman, Kate; Kawel-Boehm, Nadine; Kelle, Sebastian; Kramer, Christopher M; Lima, Joao A C; Lamb, Hildo J; Lu, Minjie; Marwick, Thomas H; Romano, Simone; Young, Alistair A; McCann, Gerry P
Myocardial strain imaging enables quantification of cardiac deformation. Cardiovascular magnetic resonance imaging (CMR) is well suited for strain assessment due to the ability to image in any given plane with high spatial and contrast resolution. CMR strain measures have incremental diagnostic and prognostic utility over conventional clinical imaging parameters across disease states. Routine integration of CMR strain assessment in clinical practice has been hindered by the lack of agreement on imaging protocols and analysis methods, variability due to noise sensitivity, and a paucity of robust normative age-, sex- and ethnicity-specific reference ranges. In recognition of the expanding applications of strain techniques in clinical and research CMR, this joint SCMR/RSNA/EACVI scientific statement integrates data from original research studies, guidelines, and opinions from experts across the field to guide responsible and evidence-based utilization of CMR strain.
PMID: 42851042
ISSN: 2047-2412
CID: 6074041
Cardiovascular Magnetic Resonance derived Myocardial Strain: Applications, Acquisition Techniques, Analysis, and Reporting. A Scientific Statement of the Society for Cardiovascular Magnetic Resonance, Radiological Society of North America, and European Association of Cardiovascular Imaging of the ESC
Gulsin, Gaurav S; Ambale-Venkatesh, Bharath; Axel, Leon; Bluemke, David A; Captur, Gabriella; Cavalcante, João L; Ennis, Daniel B; Epstein, Frederick H; Gerber, Bernhard; Hanneman, Kate; Kawel-Boehm, Nadine; Kelle, Sebastian; Kramer, Christopher M; Lima, João A C; Lamb, Hildo J; Lu, Minjie; Marwick, Thomas H; Romano, Simone; Young, Alistair A; McCann, Gerry P
Myocardial strain imaging enables quantification of cardiac deformation. Cardiovascular magnetic resonance imaging (CMR) is well suited for strain assessment due to the ability to image in any given plane with high spatial and contrast resolution. CMR strain measures have incremental diagnostic and prognostic utility over conventional clinical imaging parameters across disease states. Routine integration of CMR strain assessment in clinical practice has been hindered by the lack of agreement on imaging protocols and analysis methods, variability due to noise sensitivity, and a paucity of robust normative age-, sex- and ethnicity-specific reference ranges. In recognition of the expanding applications of strain techniques in clinical and research CMR, this joint SCMR/RSNA/EACVI scientific statement integrates data from original research studies, guidelines, and opinions from experts across the field to guide responsible and evidence-based utilization of CMR strain. © 2026 The Author(s). Published by Elsevier Inc. on behalf of Society for Cardiovascular Magnetic Resonance, by Oxford University Press on behalf of European Society of Cardiology, and by RSNA. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by/4.0/). Supplemental material is available for this article. This paper was jointly developed by Journal of Cardiovascular Magnetic Resonance, European Heart Journal - Cardiovascular Imaging, and Radiology and jointly published by Elsevier Inc, Oxford University Press, and RSNA. The articles are identical except for minor stylistic and spelling differences in keeping with each journal's style. Any citation can be used when citing this article.
PMID: 42852923
ISSN: 1527-1315
CID: 6074049
Spatial AI improves speech intelligibility for hearing aid wearers in challenging multitalker noise
Morris, Cole; Lovchinsky, Igor; Callahan, Christina; Agmon, Nathan; Pattinson, David; Lyngaas, Kaitlyn; Malkin, Israel; Shapiro, William; Svirsky, Mario
OBJECTIVE/UNASSIGNED:We evaluated the Spatial AI model on the Fortell AI hearing aids to see if it improves speech intelligibility in single-azimuth multitalker babble relative to a commercially available control hearing aid employing neural-network-based noise-reduction. DESIGN/UNASSIGNED:In a pre-registered, double-blind, randomised controlled trial, hearing aid users completed a QuickSIN test wearing the Fortell and control devices. Both devices were set to maximise directionality and noise reduction. Objective metrics were also calculated. SAMPLE/UNASSIGNED:Thirty adults with mild to moderately-severe bilateral sensorineural hearing loss. RESULTS/UNASSIGNED:≪ 0.0001). The SNR-50 improved by 9.2 dB and all participants identified more words correctly using the investigational device. Lab measurements showed an SNR improvement over unaided of 2.3 dB with the control device and 15.5 dB with the investigational hearing aid. HASPI v2 showed a similar level of SNR improvement. CONCLUSIONS/UNASSIGNED:Spatial AI yields substantial intelligibility benefits in a controlled single-azimuth multitalker configuration. The effect sizes greatly exceeded established thresholds for clinical significance, suggesting that the algorithm may help address the cocktail party problem for hearing-impaired listeners.
PMID: 42850968
ISSN: 1708-8186
CID: 6074038
Spatial AI improves speech intelligibility for hearing aid wearers in challenging multitalker noise
Morris, Cole; Lovchinsky, Igor; Callahan, Christina; Agmon, Nathan; Pattinson, David; Lyngaas, Kaitlyn; Malkin, Israel; Shapiro, William; Svirsky, Mario
OBJECTIVE/UNASSIGNED:We evaluated the Spatial AI model on the Fortell AI hearing aids to see if it improves speech intelligibility in single-azimuth multitalker babble relative to a commercially available control hearing aid employing neural-network-based noise-reduction. DESIGN/UNASSIGNED:In a pre-registered, double-blind, randomised controlled trial, hearing aid users completed a QuickSIN test wearing the Fortell and control devices. Both devices were set to maximise directionality and noise reduction. Objective metrics were also calculated. SAMPLE/UNASSIGNED:Thirty adults with mild to moderately-severe bilateral sensorineural hearing loss. RESULTS/UNASSIGNED:≪ 0.0001). The SNR-50 improved by 9.2 dB and all participants identified more words correctly using the investigational device. Lab measurements showed an SNR improvement over unaided of 2.3 dB with the control device and 15.5 dB with the investigational hearing aid. HASPI v2 showed a similar level of SNR improvement. CONCLUSIONS/UNASSIGNED:Spatial AI yields substantial intelligibility benefits in a controlled single-azimuth multitalker configuration. The effect sizes greatly exceeded established thresholds for clinical significance, suggesting that the algorithm may help address the cocktail party problem for hearing-impaired listeners.
PMID: 42850968
ISSN: 1708-8186
CID: 6074039
Longitudinal associations of rapid eye movement (REM) sleep and slow-wave sleep with plasma Alzheimer's disease biomarkers
Hwang, Jeongyeon; Figueredo, Luisa F; Valencia, Daphne I; Tolbert, Thomas M; Hamada, Eriko; Zhou, Li; Gills, Joshua L; Ruiz, Joaquin; Martillo, Katarina R; Chu, Sarah S; Kumar, Ankita; Blessing, Esther M; Bubu, Omonigho M; Parekh, Ankit; Kam, Korey; Mullins, Anna E; Rapoport, David M; Ayappa, Indu; Osorio, Ricardo S; Varga, Andrew W
INTRODUCTION/BACKGROUND:Data on how sleep architecture relates to progression of plasma Alzheimer's disease biomarkers remains limited. METHODS:Sixty-four cognitively unimpaired older adults (ages 55-90) underwent plasma collection twice 2.6 years apart and polysomnography proximate to the first plasma collection. Plasma amyloid beta (Aβ) 42 and 40 were measured via mass spectrometry. RESULTS:Frontal slow-wave activity (SWA) was inversely associated with plasma Aβ42/40 at cross-section in bivariate analysis and in a covariate-adjusted model. In comparison, low rapid eye movement (REM) sleep percentage was associated with a large longitudinal decline in annualized blood-based Aβ42/40. In exploratory analyses, the association between low REM sleep percentage and faster decline in Aβ42/40 ratio was stronger in the amyloid-positive group. DISCUSSION/CONCLUSIONS:In cognitively unimpaired older adults, non-REM SWA correlates with cross-sectional amyloid load, whereas REM sleep may predict accelerated amyloid accumulation in preclinical stage, suggesting both may serve as early biomarkers and modifiable interventional targets.
PMCID:13650600
PMID: 42851166
ISSN: 1552-5279
CID: 6074042