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31


A stroke detection and discrimination framework using broadband microwave scattering on stochastic models with deep learning

Alon, Leeor; Dehkharghani, Seena
Stroke poses an immense public health burden and remains among the primary causes of death and disability worldwide. Emergent therapy is often precluded by late or indeterminate times of onset before initial clinical presentation. Rapid, mobile, safe and low-cost stroke detection technology remains a deeply unmet clinical need. Past studies have explored the use of microwave and other small form-factor strategies for rapid stroke detection; however, widespread clinical adoption remains unrealized. Here, we investigated the use of microwave scattering perturbations from ultra wide-band antenna arrays to learn dielectric signatures of disease. Two deep neural networks (DNNs) were used for: (1) stroke detection ("classification network"), and (2) characterization of the hemorrhage location and size ("discrimination network"). Dielectric signatures were learned on a simulated cohort of 666 hemorrhagic stroke and control subjects using 2D stochastic head models. The classification network yielded a stratified K-fold stroke detection accuracy > 94% with an AUC of 0.996, while the discrimination network resulted in a mean squared error of < 0.004 cm and < 0.02 cm, for the stroke localization and size estimation, respectively. We report a novel approach to intelligent diagnostics using microwave wide-band scattering information thus circumventing conventional image-formation.
PMCID:8688451
PMID: 34930921
ISSN: 2045-2322
CID: 5108752

Multinuclear Absolute MR Thermometry [PrePrint]

Silletta, Emilia; Jerschow, Alexej; Madelin, Guillaume; Alon, Leeor
ORIGINAL:0014923
ISSN: 2331-8422
CID: 4774172

Multinuclear absolute magnetic resonance thermometry

Silletta, Emilia V; Jerschow, Alexej; Madelin, Guillaume; Alon, Leeor
Non-invasive measurement of absolute temperature is important for proper characterization of various pathologies and for evaluation of thermal dose during interventional procedures. The proton (hydrogen nucleus) magnetic resonance (MR) frequency shift method can be used to map relative temperature changes. However, spatiotemporal variations in the main magnetic field and the lack of local internal frequency reference challenge the determination of absolute temperature. Here, we introduce a multinuclear method for absolute MR thermometry, based on the fact that the hydrogen and sodium nuclei exhibit a unique and distinct characteristic frequency dependence with temperature and with electrolyte concentration. A one-to-one mapping between the precession frequency difference of the two nuclei and absolute temperature is demonstrated. Proof-of-concept experiments were conducted in aqueous solutions with different NaCl concentrations, in agarose gel samples, and in freshly excised ex vivo mouse tissues. One-dimensional chemical shift imaging experiments also demonstrated excellent agreement with infrared measurements.
PMCID:7561043
PMID: 33072888
ISSN: 2399-3650
CID: 4637232

Transverse slot antennas for high field MRI

Alon, Leeor; Lattanzi, Riccardo; Lakshmanan, Karthik; Brown, Ryan; Deniz, Cem M; Sodickson, Daniel K; Collins, Christopher M
PURPOSE/OBJECTIVE:Introduce a novel coil design using an electrically long transversely oriented slot in a conductive sheet. THEORY AND METHODS/UNASSIGNED:Theoretical considerations, numerical simulations, and experimental measurements are presented for transverse slot antennas as compared with electric dipole antennas. RESULTS:Simulations show improved central and average transmit and receive efficiency, as well as larger coverage in the transverse plane, for a single slot as compared to a single dipole element. Experiments on a body phantom confirm the simulation results for a slot antenna relative to a dipole, demonstrating a large region of relatively high sensitivity and homogeneity. Images in a human subject also show a large imaging volume for a single slot and six slot antenna array. High central transmit efficiency was observed for slot arrays relative to dipole arrays. CONCLUSION/CONCLUSIONS:Transverse slots can exhibit improved sensitivity and larger field of view compared with traditional conductive dipoles. Simulations and experiments indicate high potential for slot antennas in high field MRI. Magn Reson Med, 2018. © 2018 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
PMCID:5985532
PMID: 29388250
ISSN: 1522-2594
CID: 2933852

Synthesized tissue-equivalent dielectric phantoms using salt and polyvinylpyrrolidone solutions

Ianniello, Carlotta; de Zwart, Jacco A; Duan, Qi; Deniz, Cem M; Alon, Leeor; Lee, Jae-Seung; Lattanzi, Riccardo; Brown, Ryan
PURPOSE: To explore the use of polyvinylpyrrolidone (PVP) for simulated materials with tissue-equivalent dielectric properties. METHODS: PVP and salt were used to control, respectively, relative permittivity and electrical conductivity in a collection of 63 samples with a range of solute concentrations. Their dielectric properties were measured with a commercial probe and fitted to a 3D polynomial in order to establish an empirical recipe. The material's thermal properties and MR spectra were measured. RESULTS: The empirical polynomial recipe (available at https://www.amri.ninds.nih.gov/cgi-bin/phantomrecipe) provides the PVP and salt concentrations required for dielectric materials with permittivity and electrical conductivity values between approximately 45 and 78, and 0.1 to 2 siemens per meter, respectively, from 50 MHz to 4.5 GHz. The second- (solute concentrations) and seventh- (frequency) order polynomial recipe provided less than 2.5% relative error between the measured and target properties. PVP side peaks in the spectra were minor and unaffected by temperature changes. CONCLUSION: PVP-based phantoms are easy to prepare and nontoxic, and their semitransparency makes air bubbles easy to identify. The polymer can be used to create simulated material with a range of dielectric properties, negligible spectral side peaks, and long T2 relaxation time, which are favorable in many MR applications. Magn Reson Med, 2017. (c) 2017 International Society for Magnetic Resonance in Medicine.
PMCID:5876111
PMID: 29159985
ISSN: 1522-2594
CID: 2792382

A low-cost Mr compatible ergometer to assess post-exercise phosphocreatine recovery kinetics

Naimon, Niels D; Walczyk, Jerzy; Babb, James S; Khegai, Oleksandr; Che, Xuejiao; Alon, Leeor; Regatte, Ravinder R; Brown, Ryan; Parasoglou, Prodromos
OBJECTIVE: To develop a low-cost pedal ergometer compatible with ultrahigh (7 T) field MR systems to reliably quantify metabolic parameters in human lower leg muscle using phosphorus magnetic resonance spectroscopy. MATERIALS AND METHODS: We constructed an MR compatible ergometer using commercially available materials and elastic bands that provide resistance to movement. We recruited ten healthy subjects (eight men and two women, mean age +/- standard deviation: 32.8 +/- 6.0 years, BMI: 24.1 +/- 3.9 kg/m2). All subjects were scanned on a 7 T whole-body magnet. Each subject was scanned on two visits and performed a 90 s plantar flexion exercise at 40% maximum voluntary contraction during each scan. During the first visit, each subject performed the exercise twice in order for us to estimate the intra-exam repeatability, and once during the second visit in order to estimate the inter-exam repeatability of the time constant of phosphocreatine recovery kinetics. We assessed the intra and inter-exam reliability in terms of the within-subject coefficient of variation (CV). RESULTS: We acquired reliable measurements of PCr recovery kinetics with an intra- and inter-exam CV of 7.9% and 5.7%, respectively. CONCLUSION: We constructed a low-cost pedal ergometer compatible with ultrahigh (7 T) field MR systems, which allowed us to quantify reliably PCr recovery kinetics in lower leg muscle using 31P-MRS.
PMCID:5441940
PMID: 28054143
ISSN: 1352-8661
CID: 2386752

Prospects for Millimeter-Wave Compliance Measurement Technologies

Alon, Leeor; Gabriel, Sami; Cho, Gene Young; Brown, Ryan; Deniz, Cem M
PMCID:6083874
PMID: 30100682
ISSN: 1045-9243
CID: 3254502

A flexible nested sodium and proton coil array with wideband matching for knee cartilage MRI at 3T

Brown, Ryan; Lakshmanan, Karthik; Madelin, Guillaume; Alon, Leeor; Chang, Gregory; Sodickson, Daniel K; Regatte, Ravinder R; Wiggins, Graham C
PURPOSE: We describe a 2 x 6 channel sodium/proton array for knee MRI at 3T. Multielement coil arrays are desirable because of well-known signal-to-noise ratio advantages over volume and single-element coils. However, low tissue-coil coupling that is characteristic of coils operating at low frequency can make the potential gains from a phased array difficult to realize. METHODS: The issue of low tissue-coil coupling in the developed six-channel sodium receive array was addressed by implementing 1) a mechanically flexible former to minimize the coil-to-tissue distance and reduce the overall diameter of the array and 2) a wideband matching scheme that counteracts preamplifier noise degradation caused by coil coupling and a high-quality factor. The sodium array was complemented with a nested proton array to enable standard MRI. RESULTS: The wideband matching scheme and tight-fitting mechanical design contributed to >30% central signal-to-noise ratio gain on the sodium module over a mononuclear sodium birdcage coil, and the performance of the proton module was sufficient for clinical imaging. CONCLUSION: We expect the strategies presented in this study to be generally relevant in high-density receive arrays, particularly in x-nuclei or small animal applications. Magn Reson Med, 2015. (c) 2015 Wiley Periodicals, Inc.
PMCID:4846593
PMID: 26502310
ISSN: 1522-2594
CID: 1817442

Heat equation inversion framework for average SAR calculation from magnetic resonance thermal imaging

Alon, Leeor; Sodickson, Daniel K; Deniz, Cem M
Deposition of radiofrequency (RF) energy can be quantified via electric field or temperature change measurements. Magnetic resonance imaging has been used as a tool to measure three dimensional small temperature changes associated with RF radiation exposure. When duration of RF exposure is long, conversion from temperature change to specific absorption rate (SAR) is nontrivial due to prominent heat-diffusion and conduction effects. In this work, we demonstrated a method for calculation of SAR via an inversion of the heat equation including heat-diffusion and conduction effects. This method utilizes high-resolution three dimensional magnetic resonance temperature images and measured thermal properties of the phantom to achieve accurate calculation of SAR. Accuracy of the proposed method was analyzed with respect to operating frequency of a dipole antenna and parameters used in heat equation inversion. Bioelectromagnetics. 2016;9999:1-11. (c) 2016 Wiley Periodicals, Inc.
PMCID:5538363
PMID: 27490064
ISSN: 1521-186x
CID: 2199532

Subject- and resource-specific monitoring and proactive management of parallel radiofrequency transmission

Deniz, Cem M; Alon, Leeor; Brown, Ryan; Zhu, Yudong
PURPOSE: Develop a practical comprehensive package for proactive management of parallel radiofrequency (RF) transmission. METHODS: With a constrained optimization framework and predictive models from a prescan based multichannel calibration, we presented a method supporting design and optimization of parallel RF excitation pulses that accurately obey the forward/reflected peak and average power limits of the RF power amplifiers in parallel transmit imaging experiments and Bloch simulations. Moreover, local SAR limits were incorporated into the parallel RF excitation pulses using electromagnetic field simulations. Virtual transmit coils concept for minimization of reflected power (effecting subject-specific matching) was additionally demonstrated by leveraging experimentally calibrated power models. RESULTS: Incorporation of experimentally calibrated power prediction models resulted in accurate compliance with prescribed hardware and global specific absorption rate (SAR) limits. Incorporation of spatial average 10 g SAR models, facilitated by simplifying numerical approximations, provided assurance of patient safety. RF pulses designed with various constraints demonstrated excellent excitation fidelity-the normalized root-mean-square error of the simulated excitation profiles was 2.6% for the fully constrained pulses, comparable to that of the unconstrained pulses. An RF shimming example showed a reduction of the reflected-to-forward power ratio to 1.7% from a conventional approach's 8.1%. CONCLUSION: Using the presented RF pulse design method, effective proactive management of the multifaceted power and SAR limits was demonstrated in experimental and simulation studies. Magn Reson Med, 2015. (c) 2015 Wiley Periodicals, Inc.
PMCID:4721949
PMID: 26198052
ISSN: 1522-2594
CID: 1683892